GO Enrichment Analysis of Co-expressed Genes with
AT1G48850
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0044843: cell cycle G1/S phase transition | 0.00E+00 |
| 2 | GO:0000494: box C/D snoRNA 3'-end processing | 0.00E+00 |
| 3 | GO:0034050: host programmed cell death induced by symbiont | 0.00E+00 |
| 4 | GO:0071731: response to nitric oxide | 0.00E+00 |
| 5 | GO:0043461: proton-transporting ATP synthase complex assembly | 0.00E+00 |
| 6 | GO:1990258: histone glutamine methylation | 0.00E+00 |
| 7 | GO:0006412: translation | 1.42E-28 |
| 8 | GO:0042254: ribosome biogenesis | 1.95E-17 |
| 9 | GO:0000027: ribosomal large subunit assembly | 2.83E-08 |
| 10 | GO:0006626: protein targeting to mitochondrion | 1.37E-06 |
| 11 | GO:0006364: rRNA processing | 5.90E-06 |
| 12 | GO:0031167: rRNA methylation | 6.50E-06 |
| 13 | GO:0006413: translational initiation | 3.24E-05 |
| 14 | GO:0001510: RNA methylation | 3.35E-05 |
| 15 | GO:0006407: rRNA export from nucleus | 6.10E-05 |
| 16 | GO:0006430: lysyl-tRNA aminoacylation | 6.10E-05 |
| 17 | GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 6.10E-05 |
| 18 | GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 6.10E-05 |
| 19 | GO:0006820: anion transport | 8.59E-05 |
| 20 | GO:0015865: purine nucleotide transport | 1.48E-04 |
| 21 | GO:0045905: positive regulation of translational termination | 1.48E-04 |
| 22 | GO:0045901: positive regulation of translational elongation | 1.48E-04 |
| 23 | GO:0006123: mitochondrial electron transport, cytochrome c to oxygen | 1.48E-04 |
| 24 | GO:0009651: response to salt stress | 1.48E-04 |
| 25 | GO:0055129: L-proline biosynthetic process | 1.48E-04 |
| 26 | GO:0006452: translational frameshifting | 1.48E-04 |
| 27 | GO:0007005: mitochondrion organization | 2.21E-04 |
| 28 | GO:1902626: assembly of large subunit precursor of preribosome | 2.51E-04 |
| 29 | GO:0002181: cytoplasmic translation | 2.51E-04 |
| 30 | GO:0042256: mature ribosome assembly | 2.51E-04 |
| 31 | GO:0008652: cellular amino acid biosynthetic process | 2.51E-04 |
| 32 | GO:0008033: tRNA processing | 3.11E-04 |
| 33 | GO:0070301: cellular response to hydrogen peroxide | 3.65E-04 |
| 34 | GO:0006241: CTP biosynthetic process | 3.65E-04 |
| 35 | GO:0046902: regulation of mitochondrial membrane permeability | 3.65E-04 |
| 36 | GO:0006165: nucleoside diphosphate phosphorylation | 3.65E-04 |
| 37 | GO:0006228: UTP biosynthetic process | 3.65E-04 |
| 38 | GO:0032502: developmental process | 4.41E-04 |
| 39 | GO:0006183: GTP biosynthetic process | 4.88E-04 |
| 40 | GO:0009735: response to cytokinin | 5.18E-04 |
| 41 | GO:0071493: cellular response to UV-B | 6.19E-04 |
| 42 | GO:0006561: proline biosynthetic process | 7.57E-04 |
| 43 | GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c | 1.05E-03 |
| 44 | GO:0000028: ribosomal small subunit assembly | 1.21E-03 |
| 45 | GO:0001558: regulation of cell growth | 1.38E-03 |
| 46 | GO:0006754: ATP biosynthetic process | 1.55E-03 |
| 47 | GO:0098656: anion transmembrane transport | 1.55E-03 |
| 48 | GO:0006352: DNA-templated transcription, initiation | 2.12E-03 |
| 49 | GO:0012501: programmed cell death | 2.32E-03 |
| 50 | GO:0048467: gynoecium development | 2.74E-03 |
| 51 | GO:0046686: response to cadmium ion | 3.34E-03 |
| 52 | GO:0030150: protein import into mitochondrial matrix | 3.42E-03 |
| 53 | GO:0051302: regulation of cell division | 3.65E-03 |
| 54 | GO:0009617: response to bacterium | 4.68E-03 |
| 55 | GO:0000413: protein peptidyl-prolyl isomerization | 5.19E-03 |
| 56 | GO:0015986: ATP synthesis coupled proton transport | 5.74E-03 |
| 57 | GO:0009793: embryo development ending in seed dormancy | 6.09E-03 |
| 58 | GO:0016049: cell growth | 9.47E-03 |
| 59 | GO:0006811: ion transport | 1.05E-02 |
| 60 | GO:0048527: lateral root development | 1.09E-02 |
| 61 | GO:0009853: photorespiration | 1.16E-02 |
| 62 | GO:0048364: root development | 1.16E-02 |
| 63 | GO:0006099: tricarboxylic acid cycle | 1.20E-02 |
| 64 | GO:0006839: mitochondrial transport | 1.27E-02 |
| 65 | GO:0009640: photomorphogenesis | 1.39E-02 |
| 66 | GO:0008283: cell proliferation | 1.39E-02 |
| 67 | GO:0009734: auxin-activated signaling pathway | 1.57E-02 |
| 68 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 1.59E-02 |
| 69 | GO:0010224: response to UV-B | 1.76E-02 |
| 70 | GO:0051603: proteolysis involved in cellular protein catabolic process | 1.76E-02 |
| 71 | GO:0048367: shoot system development | 1.97E-02 |
| 72 | GO:0055085: transmembrane transport | 2.51E-02 |
| 73 | GO:0006511: ubiquitin-dependent protein catabolic process | 2.69E-02 |
| 74 | GO:0006970: response to osmotic stress | 4.67E-02 |
| 75 | GO:0009723: response to ethylene | 4.91E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1990259: histone-glutamine methyltransferase activity | 0.00E+00 |
| 2 | GO:0004735: pyrroline-5-carboxylate reductase activity | 0.00E+00 |
| 3 | GO:0003735: structural constituent of ribosome | 3.21E-32 |
| 4 | GO:0003729: mRNA binding | 2.97E-10 |
| 5 | GO:0008649: rRNA methyltransferase activity | 8.32E-07 |
| 6 | GO:0030515: snoRNA binding | 1.98E-05 |
| 7 | GO:0015288: porin activity | 2.62E-05 |
| 8 | GO:0008308: voltage-gated anion channel activity | 3.35E-05 |
| 9 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 4.23E-05 |
| 10 | GO:0003743: translation initiation factor activity | 5.00E-05 |
| 11 | GO:0004824: lysine-tRNA ligase activity | 6.10E-05 |
| 12 | GO:0030371: translation repressor activity | 6.10E-05 |
| 13 | GO:0003723: RNA binding | 6.16E-05 |
| 14 | GO:0070180: large ribosomal subunit rRNA binding | 2.51E-04 |
| 15 | GO:0004108: citrate (Si)-synthase activity | 3.65E-04 |
| 16 | GO:0004550: nucleoside diphosphate kinase activity | 3.65E-04 |
| 17 | GO:0019201: nucleotide kinase activity | 3.65E-04 |
| 18 | GO:0005471: ATP:ADP antiporter activity | 6.19E-04 |
| 19 | GO:0004017: adenylate kinase activity | 9.01E-04 |
| 20 | GO:0003746: translation elongation factor activity | 9.58E-04 |
| 21 | GO:0008235: metalloexopeptidase activity | 1.05E-03 |
| 22 | GO:0043022: ribosome binding | 1.21E-03 |
| 23 | GO:0005515: protein binding | 1.22E-03 |
| 24 | GO:0015114: phosphate ion transmembrane transporter activity | 2.52E-03 |
| 25 | GO:0015266: protein channel activity | 2.52E-03 |
| 26 | GO:0004298: threonine-type endopeptidase activity | 3.89E-03 |
| 27 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 5.46E-03 |
| 28 | GO:0008137: NADH dehydrogenase (ubiquinone) activity | 6.32E-03 |
| 29 | GO:0046872: metal ion binding | 1.15E-02 |
| 30 | GO:0051539: 4 iron, 4 sulfur cluster binding | 1.27E-02 |
| 31 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.55E-02 |
| 32 | GO:0019843: rRNA binding | 2.58E-02 |
| 33 | GO:0005507: copper ion binding | 2.82E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0022625: cytosolic large ribosomal subunit | 3.08E-32 |
| 2 | GO:0022626: cytosolic ribosome | 2.10E-28 |
| 3 | GO:0005840: ribosome | 2.72E-23 |
| 4 | GO:0005730: nucleolus | 2.25E-21 |
| 5 | GO:0005774: vacuolar membrane | 3.77E-13 |
| 6 | GO:0005829: cytosol | 9.24E-11 |
| 7 | GO:0005737: cytoplasm | 5.15E-10 |
| 8 | GO:0022627: cytosolic small ribosomal subunit | 3.25E-09 |
| 9 | GO:0009506: plasmodesma | 3.58E-09 |
| 10 | GO:0005773: vacuole | 2.04E-07 |
| 11 | GO:0005852: eukaryotic translation initiation factor 3 complex | 8.33E-07 |
| 12 | GO:0005758: mitochondrial intermembrane space | 3.12E-06 |
| 13 | GO:0031428: box C/D snoRNP complex | 1.00E-05 |
| 14 | GO:0016020: membrane | 1.78E-05 |
| 15 | GO:0005743: mitochondrial inner membrane | 1.84E-05 |
| 16 | GO:0046930: pore complex | 3.35E-05 |
| 17 | GO:0015030: Cajal body | 5.14E-05 |
| 18 | GO:0015934: large ribosomal subunit | 5.31E-05 |
| 19 | GO:0030686: 90S preribosome | 6.10E-05 |
| 20 | GO:0032040: small-subunit processome | 8.59E-05 |
| 21 | GO:0005747: mitochondrial respiratory chain complex I | 1.83E-04 |
| 22 | GO:0005741: mitochondrial outer membrane | 2.01E-04 |
| 23 | GO:0015935: small ribosomal subunit | 2.01E-04 |
| 24 | GO:0005618: cell wall | 2.25E-04 |
| 25 | GO:0000275: mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) | 4.88E-04 |
| 26 | GO:0031597: cytosolic proteasome complex | 9.01E-04 |
| 27 | GO:0005742: mitochondrial outer membrane translocase complex | 1.38E-03 |
| 28 | GO:0005886: plasma membrane | 1.43E-03 |
| 29 | GO:0008180: COP9 signalosome | 1.55E-03 |
| 30 | GO:0005740: mitochondrial envelope | 1.92E-03 |
| 31 | GO:0005753: mitochondrial proton-transporting ATP synthase complex | 2.96E-03 |
| 32 | GO:0009507: chloroplast | 3.22E-03 |
| 33 | GO:0045271: respiratory chain complex I | 3.65E-03 |
| 34 | GO:0070469: respiratory chain | 3.65E-03 |
| 35 | GO:0005839: proteasome core complex | 3.89E-03 |
| 36 | GO:0016592: mediator complex | 6.61E-03 |
| 37 | GO:0030529: intracellular ribonucleoprotein complex | 8.16E-03 |
| 38 | GO:0005739: mitochondrion | 1.27E-02 |
| 39 | GO:0031966: mitochondrial membrane | 1.63E-02 |
| 40 | GO:0000502: proteasome complex | 1.71E-02 |
| 41 | GO:0005759: mitochondrial matrix | 3.04E-02 |
| 42 | GO:0005622: intracellular | 3.51E-02 |
| 43 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 4.73E-02 |