Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G45145

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0045792: negative regulation of cell size0.00E+00
2GO:0090069: regulation of ribosome biogenesis0.00E+00
3GO:0030149: sphingolipid catabolic process0.00E+00
4GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)0.00E+00
5GO:0000466: maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)0.00E+00
6GO:0072321: chaperone-mediated protein transport0.00E+00
7GO:0001881: receptor recycling0.00E+00
8GO:0071433: cell wall repair0.00E+00
9GO:1900409: positive regulation of cellular response to oxidative stress0.00E+00
10GO:0072722: response to amitrole0.00E+00
11GO:0070212: protein poly-ADP-ribosylation0.00E+00
12GO:0042430: indole-containing compound metabolic process0.00E+00
13GO:0006457: protein folding6.72E-09
14GO:0042742: defense response to bacterium1.03E-08
15GO:0046686: response to cadmium ion2.01E-08
16GO:0034976: response to endoplasmic reticulum stress7.12E-08
17GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response3.66E-06
18GO:0006468: protein phosphorylation4.05E-06
19GO:2000072: regulation of defense response to fungus, incompatible interaction4.48E-06
20GO:0055074: calcium ion homeostasis1.59E-05
21GO:0045039: protein import into mitochondrial inner membrane1.59E-05
22GO:0010193: response to ozone3.18E-05
23GO:0001676: long-chain fatty acid metabolic process3.55E-05
24GO:0045454: cell redox homeostasis5.13E-05
25GO:0007166: cell surface receptor signaling pathway5.90E-05
26GO:0060548: negative regulation of cell death6.35E-05
27GO:0009615: response to virus6.55E-05
28GO:0009617: response to bacterium6.58E-05
29GO:0031365: N-terminal protein amino acid modification1.00E-04
30GO:0006952: defense response1.29E-04
31GO:0016998: cell wall macromolecule catabolic process1.61E-04
32GO:2000232: regulation of rRNA processing3.14E-04
33GO:0060862: negative regulation of floral organ abscission3.14E-04
34GO:0017183: peptidyl-diphthamide biosynthetic process from peptidyl-histidine3.14E-04
35GO:0006805: xenobiotic metabolic process3.14E-04
36GO:0010197: polar nucleus fusion3.22E-04
37GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline3.24E-04
38GO:0006623: protein targeting to vacuole3.89E-04
39GO:0000302: response to reactive oxygen species4.24E-04
40GO:0009408: response to heat4.71E-04
41GO:0046685: response to arsenic-containing substance4.78E-04
42GO:0009626: plant-type hypersensitive response5.87E-04
43GO:0006032: chitin catabolic process6.60E-04
44GO:0019752: carboxylic acid metabolic process6.87E-04
45GO:1902000: homogentisate catabolic process6.87E-04
46GO:0031349: positive regulation of defense response6.87E-04
47GO:0051258: protein polymerization6.87E-04
48GO:0051252: regulation of RNA metabolic process6.87E-04
49GO:0002221: pattern recognition receptor signaling pathway6.87E-04
50GO:0071395: cellular response to jasmonic acid stimulus6.87E-04
51GO:0080181: lateral root branching6.87E-04
52GO:0009627: systemic acquired resistance7.83E-04
53GO:0080167: response to karrikin9.90E-04
54GO:0010200: response to chitin1.05E-03
55GO:0009407: toxin catabolic process1.07E-03
56GO:0002237: response to molecule of bacterial origin1.11E-03
57GO:0010581: regulation of starch biosynthetic process1.11E-03
58GO:1900140: regulation of seedling development1.11E-03
59GO:0008333: endosome to lysosome transport1.11E-03
60GO:0010272: response to silver ion1.11E-03
61GO:0009072: aromatic amino acid family metabolic process1.11E-03
62GO:0048281: inflorescence morphogenesis1.11E-03
63GO:0015695: organic cation transport1.11E-03
64GO:0010167: response to nitrate1.24E-03
65GO:0045087: innate immune response1.28E-03
66GO:0006886: intracellular protein transport1.43E-03
67GO:0000027: ribosomal large subunit assembly1.52E-03
68GO:0009863: salicylic acid mediated signaling pathway1.52E-03
69GO:0015696: ammonium transport1.60E-03
70GO:0071323: cellular response to chitin1.60E-03
71GO:0009855: determination of bilateral symmetry1.60E-03
72GO:0000973: posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery1.60E-03
73GO:0006515: misfolded or incompletely synthesized protein catabolic process1.60E-03
74GO:0048194: Golgi vesicle budding1.60E-03
75GO:0007276: gamete generation1.60E-03
76GO:0010150: leaf senescence1.61E-03
77GO:0006621: protein retention in ER lumen2.14E-03
78GO:0051205: protein insertion into membrane2.14E-03
79GO:0031087: deadenylation-independent decapping of nuclear-transcribed mRNA2.14E-03
80GO:0080142: regulation of salicylic acid biosynthetic process2.14E-03
81GO:0072488: ammonium transmembrane transport2.14E-03
82GO:0000460: maturation of 5.8S rRNA2.14E-03
83GO:0042273: ribosomal large subunit biogenesis2.14E-03
84GO:0006364: rRNA processing2.57E-03
85GO:0006486: protein glycosylation2.57E-03
86GO:0046283: anthocyanin-containing compound metabolic process2.74E-03
87GO:0006564: L-serine biosynthetic process2.74E-03
88GO:0006461: protein complex assembly2.74E-03
89GO:0015031: protein transport3.14E-03
90GO:0018258: protein O-linked glycosylation via hydroxyproline3.38E-03
91GO:0009228: thiamine biosynthetic process3.38E-03
92GO:0010942: positive regulation of cell death3.38E-03
93GO:0010405: arabinogalactan protein metabolic process3.38E-03
94GO:0006751: glutathione catabolic process3.38E-03
95GO:0000470: maturation of LSU-rRNA3.38E-03
96GO:0016554: cytidine to uridine editing3.38E-03
97GO:0009553: embryo sac development3.88E-03
98GO:0030163: protein catabolic process4.23E-03
99GO:0016192: vesicle-mediated transport4.71E-03
100GO:0030026: cellular manganese ion homeostasis4.80E-03
101GO:0006880: intracellular sequestering of iron ion4.80E-03
102GO:0043090: amino acid import4.80E-03
103GO:0071446: cellular response to salicylic acid stimulus4.80E-03
104GO:1900056: negative regulation of leaf senescence4.80E-03
105GO:0080186: developmental vegetative growth4.80E-03
106GO:0031540: regulation of anthocyanin biosynthetic process5.57E-03
107GO:0006102: isocitrate metabolic process5.57E-03
108GO:0010204: defense response signaling pathway, resistance gene-independent6.39E-03
109GO:0009699: phenylpropanoid biosynthetic process6.39E-03
110GO:0008219: cell death7.02E-03
111GO:0006189: 'de novo' IMP biosynthetic process7.24E-03
112GO:0009751: response to salicylic acid7.73E-03
113GO:0010043: response to zinc ion8.12E-03
114GO:0048354: mucilage biosynthetic process involved in seed coat development8.14E-03
115GO:0010205: photoinhibition8.14E-03
116GO:0043067: regulation of programmed cell death8.14E-03
117GO:0009867: jasmonic acid mediated signaling pathway8.90E-03
118GO:0009870: defense response signaling pathway, resistance gene-dependent9.07E-03
119GO:0000103: sulfate assimilation9.07E-03
120GO:0072593: reactive oxygen species metabolic process1.00E-02
121GO:0000272: polysaccharide catabolic process1.00E-02
122GO:0016485: protein processing1.00E-02
123GO:0009651: response to salt stress1.00E-02
124GO:0006631: fatty acid metabolic process1.06E-02
125GO:0015706: nitrate transport1.11E-02
126GO:0071365: cellular response to auxin stimulus1.11E-02
127GO:0012501: programmed cell death1.11E-02
128GO:0006626: protein targeting to mitochondrion1.21E-02
129GO:0010102: lateral root morphogenesis1.21E-02
130GO:0010075: regulation of meristem growth1.21E-02
131GO:0009636: response to toxic substance1.29E-02
132GO:0007034: vacuolar transport1.32E-02
133GO:0009934: regulation of meristem structural organization1.32E-02
134GO:0031347: regulation of defense response1.40E-02
135GO:0046688: response to copper ion1.43E-02
136GO:0009969: xyloglucan biosynthetic process1.43E-02
137GO:0042343: indole glucosinolate metabolic process1.43E-02
138GO:0030150: protein import into mitochondrial matrix1.66E-02
139GO:0006406: mRNA export from nucleus1.66E-02
140GO:0010187: negative regulation of seed germination1.66E-02
141GO:0006825: copper ion transport1.78E-02
142GO:0051302: regulation of cell division1.78E-02
143GO:0006979: response to oxidative stress1.85E-02
144GO:0098542: defense response to other organism1.91E-02
145GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.93E-02
146GO:0030433: ubiquitin-dependent ERAD pathway2.03E-02
147GO:0007005: mitochondrion organization2.03E-02
148GO:0031348: negative regulation of defense response2.03E-02
149GO:0009411: response to UV2.16E-02
150GO:0009625: response to insect2.16E-02
151GO:0010227: floral organ abscission2.16E-02
152GO:0009306: protein secretion2.29E-02
153GO:0010091: trichome branching2.29E-02
154GO:0042147: retrograde transport, endosome to Golgi2.43E-02
155GO:0034220: ion transmembrane transport2.57E-02
156GO:0006606: protein import into nucleus2.57E-02
157GO:0042631: cellular response to water deprivation2.57E-02
158GO:0006520: cellular amino acid metabolic process2.71E-02
159GO:0006662: glycerol ether metabolic process2.71E-02
160GO:0048868: pollen tube development2.71E-02
161GO:0009960: endosperm development2.71E-02
162GO:0009646: response to absence of light2.85E-02
163GO:0006511: ubiquitin-dependent protein catabolic process2.95E-02
164GO:0006891: intra-Golgi vesicle-mediated transport3.15E-02
165GO:0080156: mitochondrial mRNA modification3.15E-02
166GO:0009790: embryo development3.24E-02
167GO:0071281: cellular response to iron ion3.45E-02
168GO:0009567: double fertilization forming a zygote and endosperm3.61E-02
169GO:0009816: defense response to bacterium, incompatible interaction4.25E-02
170GO:0055114: oxidation-reduction process4.34E-02
171GO:0006470: protein dephosphorylation4.37E-02
172GO:0042128: nitrate assimilation4.42E-02
173GO:0006950: response to stress4.59E-02
174GO:0050832: defense response to fungus4.67E-02
175GO:0006508: proteolysis4.95E-02
RankGO TermAdjusted P value
1GO:0005046: KDEL sequence binding0.00E+00
2GO:0016034: maleylacetoacetate isomerase activity0.00E+00
3GO:0050269: coniferyl-aldehyde dehydrogenase activity0.00E+00
4GO:0008117: sphinganine-1-phosphate aldolase activity0.00E+00
5GO:0004164: diphthine synthase activity0.00E+00
6GO:0005524: ATP binding4.71E-07
7GO:0043021: ribonucleoprotein complex binding4.48E-06
8GO:0004714: transmembrane receptor protein tyrosine kinase activity8.86E-06
9GO:0051082: unfolded protein binding9.30E-06
10GO:0003756: protein disulfide isomerase activity1.26E-05
11GO:0004675: transmembrane receptor protein serine/threonine kinase activity3.48E-05
12GO:0008061: chitin binding8.78E-05
13GO:0050897: cobalt ion binding1.40E-04
14GO:0102391: decanoate--CoA ligase activity1.97E-04
15GO:0004656: procollagen-proline 4-dioxygenase activity1.97E-04
16GO:0008320: protein transmembrane transporter activity2.57E-04
17GO:0043295: glutathione binding2.57E-04
18GO:0030515: snoRNA binding2.57E-04
19GO:0004467: long-chain fatty acid-CoA ligase activity2.57E-04
20GO:0008235: metalloexopeptidase activity2.57E-04
21GO:0080042: ADP-glucose pyrophosphohydrolase activity3.14E-04
22GO:0030544: Hsp70 protein binding3.14E-04
23GO:0031127: alpha-(1,2)-fucosyltransferase activity3.14E-04
24GO:0042134: rRNA primary transcript binding3.14E-04
25GO:0004638: phosphoribosylaminoimidazole carboxylase activity3.14E-04
26GO:0004591: oxoglutarate dehydrogenase (succinyl-transferring) activity3.14E-04
27GO:0005509: calcium ion binding4.65E-04
28GO:0004568: chitinase activity6.60E-04
29GO:0008428: ribonuclease inhibitor activity6.87E-04
30GO:0019172: glyoxalase III activity6.87E-04
31GO:0070361: mitochondrial light strand promoter anti-sense binding6.87E-04
32GO:0004338: glucan exo-1,3-beta-glucosidase activity6.87E-04
33GO:0048531: beta-1,3-galactosyltransferase activity6.87E-04
34GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity6.87E-04
35GO:0080041: ADP-ribose pyrophosphohydrolase activity6.87E-04
36GO:0004617: phosphoglycerate dehydrogenase activity6.87E-04
37GO:0017110: nucleoside-diphosphatase activity6.87E-04
38GO:0016301: kinase activity6.88E-04
39GO:0004177: aminopeptidase activity7.62E-04
40GO:0004148: dihydrolipoyl dehydrogenase activity1.11E-03
41GO:0003840: gamma-glutamyltransferase activity1.11E-03
42GO:0036374: glutathione hydrolase activity1.11E-03
43GO:0004557: alpha-galactosidase activity1.11E-03
44GO:0052692: raffinose alpha-galactosidase activity1.11E-03
45GO:0016531: copper chaperone activity1.11E-03
46GO:0003746: translation elongation factor activity1.28E-03
47GO:0004672: protein kinase activity1.42E-03
48GO:0000166: nucleotide binding1.47E-03
49GO:0031418: L-ascorbic acid binding1.52E-03
50GO:0004449: isocitrate dehydrogenase (NAD+) activity1.60E-03
51GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity1.60E-03
52GO:0004364: glutathione transferase activity1.67E-03
53GO:0004674: protein serine/threonine kinase activity1.69E-03
54GO:0033612: receptor serine/threonine kinase binding1.84E-03
55GO:0046923: ER retention sequence binding2.14E-03
56GO:0051287: NAD binding2.24E-03
57GO:0030246: carbohydrate binding2.66E-03
58GO:0008948: oxaloacetate decarboxylase activity2.74E-03
59GO:0047631: ADP-ribose diphosphatase activity2.74E-03
60GO:0002020: protease binding2.74E-03
61GO:0005515: protein binding2.76E-03
62GO:0000210: NAD+ diphosphatase activity3.38E-03
63GO:0004029: aldehyde dehydrogenase (NAD) activity3.38E-03
64GO:0008519: ammonium transmembrane transporter activity3.38E-03
65GO:0030976: thiamine pyrophosphate binding3.38E-03
66GO:1990714: hydroxyproline O-galactosyltransferase activity3.38E-03
67GO:0004012: phospholipid-translocating ATPase activity4.06E-03
68GO:0004602: glutathione peroxidase activity4.06E-03
69GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity4.80E-03
70GO:0016831: carboxy-lyase activity4.80E-03
71GO:0017056: structural constituent of nuclear pore5.57E-03
72GO:0008135: translation factor activity, RNA binding6.39E-03
73GO:0008565: protein transporter activity6.74E-03
74GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity7.02E-03
75GO:0008417: fucosyltransferase activity7.24E-03
76GO:0005487: nucleocytoplasmic transporter activity8.14E-03
77GO:0005384: manganese ion transmembrane transporter activity8.14E-03
78GO:0015112: nitrate transmembrane transporter activity8.14E-03
79GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity8.14E-03
80GO:0005381: iron ion transmembrane transporter activity8.14E-03
81GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors8.90E-03
82GO:0004713: protein tyrosine kinase activity9.07E-03
83GO:0008378: galactosyltransferase activity1.11E-02
84GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.21E-02
85GO:0031072: heat shock protein binding1.21E-02
86GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.32E-02
87GO:0003712: transcription cofactor activity1.43E-02
88GO:0004190: aspartic-type endopeptidase activity1.43E-02
89GO:0016298: lipase activity1.61E-02
90GO:0005506: iron ion binding1.77E-02
91GO:0004298: threonine-type endopeptidase activity1.91E-02
92GO:0004176: ATP-dependent peptidase activity1.91E-02
93GO:0008810: cellulase activity2.16E-02
94GO:0015035: protein disulfide oxidoreductase activity2.28E-02
95GO:0047134: protein-disulfide reductase activity2.43E-02
96GO:0004722: protein serine/threonine phosphatase activity2.61E-02
97GO:0016758: transferase activity, transferring hexosyl groups2.70E-02
98GO:0004527: exonuclease activity2.71E-02
99GO:0003713: transcription coactivator activity2.71E-02
100GO:0030276: clathrin binding2.71E-02
101GO:0004791: thioredoxin-disulfide reductase activity2.85E-02
102GO:0016853: isomerase activity2.85E-02
103GO:0004872: receptor activity3.00E-02
104GO:0005507: copper ion binding3.16E-02
105GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor3.45E-02
106GO:0016597: amino acid binding3.92E-02
107GO:0015250: water channel activity4.09E-02
108GO:0004721: phosphoprotein phosphatase activity4.59E-02
109GO:0030247: polysaccharide binding4.59E-02
110GO:0008236: serine-type peptidase activity4.76E-02
RankGO TermAdjusted P value
1GO:0070545: PeBoW complex0.00E+00
2GO:0042719: mitochondrial intermembrane space protein transporter complex0.00E+00
3GO:0034457: Mpp10 complex0.00E+00
4GO:0000327: lytic vacuole within protein storage vacuole0.00E+00
5GO:0005783: endoplasmic reticulum9.77E-12
6GO:0005788: endoplasmic reticulum lumen9.22E-11
7GO:0005886: plasma membrane1.69E-09
8GO:0005773: vacuole3.03E-05
9GO:0005789: endoplasmic reticulum membrane3.37E-05
10GO:0005794: Golgi apparatus1.67E-04
11GO:0016363: nuclear matrix1.97E-04
12GO:0005801: cis-Golgi network1.97E-04
13GO:0005774: vacuolar membrane2.04E-04
14GO:0030687: preribosome, large subunit precursor2.57E-04
15GO:0030665: clathrin-coated vesicle membrane5.66E-04
16GO:0017119: Golgi transport complex6.60E-04
17GO:0030134: ER to Golgi transport vesicle6.87E-04
18GO:0048046: apoplast6.94E-04
19GO:0032040: small-subunit processome8.70E-04
20GO:0005618: cell wall8.95E-04
21GO:0009505: plant-type cell wall9.78E-04
22GO:0031080: nuclear pore outer ring1.11E-03
23GO:0046861: glyoxysomal membrane1.11E-03
24GO:0016021: integral component of membrane1.15E-03
25GO:0005758: mitochondrial intermembrane space1.52E-03
26GO:0009506: plasmodesma3.00E-03
27GO:0031428: box C/D snoRNP complex3.38E-03
28GO:0010168: ER body3.38E-03
29GO:0005771: multivesicular body3.38E-03
30GO:0030904: retromer complex3.38E-03
31GO:0005834: heterotrimeric G-protein complex3.45E-03
32GO:0080008: Cul4-RING E3 ubiquitin ligase complex3.62E-03
33GO:0032580: Golgi cisterna membrane4.50E-03
34GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane4.80E-03
35GO:0030131: clathrin adaptor complex5.57E-03
36GO:0000326: protein storage vacuole6.39E-03
37GO:0009514: glyoxysome6.39E-03
38GO:0019773: proteasome core complex, alpha-subunit complex6.39E-03
39GO:0009507: chloroplast6.50E-03
40GO:0019005: SCF ubiquitin ligase complex7.02E-03
41GO:0005759: mitochondrial matrix7.18E-03
42GO:0005829: cytosol7.52E-03
43GO:0015030: Cajal body8.14E-03
44GO:0005740: mitochondrial envelope9.07E-03
45GO:0031902: late endosome membrane1.06E-02
46GO:0019013: viral nucleocapsid1.21E-02
47GO:0031012: extracellular matrix1.21E-02
48GO:0005887: integral component of plasma membrane1.25E-02
49GO:0005795: Golgi stack1.43E-02
50GO:0005730: nucleolus1.65E-02
51GO:0005747: mitochondrial respiratory chain complex I1.90E-02
52GO:0005741: mitochondrial outer membrane1.91E-02
53GO:0005839: proteasome core complex1.91E-02
54GO:0005744: mitochondrial inner membrane presequence translocase complex2.29E-02
55GO:0005654: nucleoplasm2.70E-02
56GO:0005743: mitochondrial inner membrane2.76E-02
57GO:0016592: mediator complex3.30E-02
58GO:0030529: intracellular ribonucleoprotein complex4.09E-02
59GO:0000932: P-body4.09E-02
60GO:0016020: membrane4.73E-02
61GO:0000151: ubiquitin ligase complex4.93E-02
<
Gene type



Gene DE type