GO Enrichment Analysis of Co-expressed Genes with
AT1G35420
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process | 0.00E+00 |
| 2 | GO:0001778: plasma membrane repair | 0.00E+00 |
| 3 | GO:0018023: peptidyl-lysine trimethylation | 0.00E+00 |
| 4 | GO:0010027: thylakoid membrane organization | 1.30E-06 |
| 5 | GO:0010190: cytochrome b6f complex assembly | 1.59E-05 |
| 6 | GO:0065002: intracellular protein transmembrane transport | 8.09E-05 |
| 7 | GO:0000305: response to oxygen radical | 8.09E-05 |
| 8 | GO:0043953: protein transport by the Tat complex | 8.09E-05 |
| 9 | GO:0055114: oxidation-reduction process | 1.32E-04 |
| 10 | GO:0010207: photosystem II assembly | 1.70E-04 |
| 11 | GO:0035304: regulation of protein dephosphorylation | 1.93E-04 |
| 12 | GO:0080005: photosystem stoichiometry adjustment | 1.93E-04 |
| 13 | GO:1900871: chloroplast mRNA modification | 1.93E-04 |
| 14 | GO:0042939: tripeptide transport | 1.93E-04 |
| 15 | GO:0018026: peptidyl-lysine monomethylation | 1.93E-04 |
| 16 | GO:0046740: transport of virus in host, cell to cell | 1.93E-04 |
| 17 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 1.93E-04 |
| 18 | GO:0071457: cellular response to ozone | 1.93E-04 |
| 19 | GO:0045454: cell redox homeostasis | 3.14E-04 |
| 20 | GO:0051604: protein maturation | 3.24E-04 |
| 21 | GO:0016050: vesicle organization | 3.24E-04 |
| 22 | GO:0005977: glycogen metabolic process | 3.24E-04 |
| 23 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 4.66E-04 |
| 24 | GO:0006612: protein targeting to membrane | 4.66E-04 |
| 25 | GO:0071484: cellular response to light intensity | 4.66E-04 |
| 26 | GO:0032456: endocytic recycling | 4.66E-04 |
| 27 | GO:0006662: glycerol ether metabolic process | 4.83E-04 |
| 28 | GO:0071472: cellular response to salt stress | 4.83E-04 |
| 29 | GO:0042938: dipeptide transport | 6.21E-04 |
| 30 | GO:0010021: amylopectin biosynthetic process | 6.21E-04 |
| 31 | GO:0071486: cellular response to high light intensity | 6.21E-04 |
| 32 | GO:0006109: regulation of carbohydrate metabolic process | 6.21E-04 |
| 33 | GO:0006749: glutathione metabolic process | 6.21E-04 |
| 34 | GO:0016032: viral process | 6.32E-04 |
| 35 | GO:0045038: protein import into chloroplast thylakoid membrane | 7.86E-04 |
| 36 | GO:0071493: cellular response to UV-B | 7.86E-04 |
| 37 | GO:0016120: carotene biosynthetic process | 7.86E-04 |
| 38 | GO:0010304: PSII associated light-harvesting complex II catabolic process | 9.59E-04 |
| 39 | GO:0042549: photosystem II stabilization | 9.59E-04 |
| 40 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 9.59E-04 |
| 41 | GO:0009612: response to mechanical stimulus | 1.14E-03 |
| 42 | GO:0005975: carbohydrate metabolic process | 1.33E-03 |
| 43 | GO:0015693: magnesium ion transport | 1.34E-03 |
| 44 | GO:0009772: photosynthetic electron transport in photosystem II | 1.34E-03 |
| 45 | GO:0006614: SRP-dependent cotranslational protein targeting to membrane | 1.34E-03 |
| 46 | GO:0034599: cellular response to oxidative stress | 1.42E-03 |
| 47 | GO:0030091: protein repair | 1.54E-03 |
| 48 | GO:0006605: protein targeting | 1.54E-03 |
| 49 | GO:0009642: response to light intensity | 1.54E-03 |
| 50 | GO:0019430: removal of superoxide radicals | 1.76E-03 |
| 51 | GO:0015996: chlorophyll catabolic process | 1.76E-03 |
| 52 | GO:0098656: anion transmembrane transport | 1.98E-03 |
| 53 | GO:0010205: photoinhibition | 2.22E-03 |
| 54 | GO:0006857: oligopeptide transport | 2.50E-03 |
| 55 | GO:0019684: photosynthesis, light reaction | 2.71E-03 |
| 56 | GO:0043085: positive regulation of catalytic activity | 2.71E-03 |
| 57 | GO:1903507: negative regulation of nucleic acid-templated transcription | 2.71E-03 |
| 58 | GO:0046856: phosphatidylinositol dephosphorylation | 2.71E-03 |
| 59 | GO:0009773: photosynthetic electron transport in photosystem I | 2.71E-03 |
| 60 | GO:0010628: positive regulation of gene expression | 3.24E-03 |
| 61 | GO:0006094: gluconeogenesis | 3.24E-03 |
| 62 | GO:0006807: nitrogen compound metabolic process | 3.24E-03 |
| 63 | GO:2000377: regulation of reactive oxygen species metabolic process | 4.40E-03 |
| 64 | GO:0008299: isoprenoid biosynthetic process | 4.70E-03 |
| 65 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 5.34E-03 |
| 66 | GO:0009686: gibberellin biosynthetic process | 5.67E-03 |
| 67 | GO:0016117: carotenoid biosynthetic process | 6.35E-03 |
| 68 | GO:0007166: cell surface receptor signaling pathway | 6.50E-03 |
| 69 | GO:0000413: protein peptidyl-prolyl isomerization | 6.70E-03 |
| 70 | GO:0010268: brassinosteroid homeostasis | 7.06E-03 |
| 71 | GO:0010305: leaf vascular tissue pattern formation | 7.06E-03 |
| 72 | GO:0019252: starch biosynthetic process | 7.79E-03 |
| 73 | GO:0016132: brassinosteroid biosynthetic process | 8.17E-03 |
| 74 | GO:0009567: double fertilization forming a zygote and endosperm | 9.34E-03 |
| 75 | GO:0016125: sterol metabolic process | 9.34E-03 |
| 76 | GO:0071805: potassium ion transmembrane transport | 9.75E-03 |
| 77 | GO:0009615: response to virus | 1.06E-02 |
| 78 | GO:0015979: photosynthesis | 1.25E-02 |
| 79 | GO:0000160: phosphorelay signal transduction system | 1.32E-02 |
| 80 | GO:0006897: endocytosis | 1.70E-02 |
| 81 | GO:0031347: regulation of defense response | 2.07E-02 |
| 82 | GO:0009736: cytokinin-activated signaling pathway | 2.23E-02 |
| 83 | GO:0006364: rRNA processing | 2.23E-02 |
| 84 | GO:0006813: potassium ion transport | 2.23E-02 |
| 85 | GO:0006096: glycolytic process | 2.51E-02 |
| 86 | GO:0043086: negative regulation of catalytic activity | 2.51E-02 |
| 87 | GO:0007623: circadian rhythm | 4.23E-02 |
| 88 | GO:0009451: RNA modification | 4.30E-02 |
| 89 | GO:0010468: regulation of gene expression | 4.80E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0102193: protein-ribulosamine 3-kinase activity | 0.00E+00 |
| 2 | GO:0016166: phytoene dehydrogenase activity | 0.00E+00 |
| 3 | GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity | 0.00E+00 |
| 4 | GO:0051777: ent-kaurenoate oxidase activity | 8.09E-05 |
| 5 | GO:0004856: xylulokinase activity | 8.09E-05 |
| 6 | GO:0034256: chlorophyll(ide) b reductase activity | 8.09E-05 |
| 7 | GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity | 8.09E-05 |
| 8 | GO:0050139: nicotinate-N-glucosyltransferase activity | 8.09E-05 |
| 9 | GO:0010242: oxygen evolving activity | 8.09E-05 |
| 10 | GO:0019156: isoamylase activity | 1.93E-04 |
| 11 | GO:0042937: tripeptide transporter activity | 1.93E-04 |
| 12 | GO:0004362: glutathione-disulfide reductase activity | 1.93E-04 |
| 13 | GO:0009977: proton motive force dependent protein transmembrane transporter activity | 1.93E-04 |
| 14 | GO:1901981: phosphatidylinositol phosphate binding | 1.93E-04 |
| 15 | GO:0004751: ribose-5-phosphate isomerase activity | 3.24E-04 |
| 16 | GO:0070402: NADPH binding | 3.24E-04 |
| 17 | GO:0047134: protein-disulfide reductase activity | 4.15E-04 |
| 18 | GO:0019201: nucleotide kinase activity | 4.66E-04 |
| 19 | GO:0004791: thioredoxin-disulfide reductase activity | 5.19E-04 |
| 20 | GO:0016279: protein-lysine N-methyltransferase activity | 6.21E-04 |
| 21 | GO:0042936: dipeptide transporter activity | 6.21E-04 |
| 22 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 6.71E-04 |
| 23 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 7.86E-04 |
| 24 | GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity | 9.59E-04 |
| 25 | GO:0004556: alpha-amylase activity | 9.59E-04 |
| 26 | GO:0004332: fructose-bisphosphate aldolase activity | 9.59E-04 |
| 27 | GO:0035673: oligopeptide transmembrane transporter activity | 9.59E-04 |
| 28 | GO:0004784: superoxide dismutase activity | 9.59E-04 |
| 29 | GO:0042578: phosphoric ester hydrolase activity | 9.59E-04 |
| 30 | GO:0004017: adenylate kinase activity | 1.14E-03 |
| 31 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 1.14E-03 |
| 32 | GO:0043022: ribosome binding | 1.54E-03 |
| 33 | GO:0008047: enzyme activator activity | 2.46E-03 |
| 34 | GO:0015198: oligopeptide transporter activity | 2.97E-03 |
| 35 | GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity | 2.97E-03 |
| 36 | GO:0005315: inorganic phosphate transmembrane transporter activity | 3.24E-03 |
| 37 | GO:0015095: magnesium ion transmembrane transporter activity | 3.24E-03 |
| 38 | GO:0009982: pseudouridine synthase activity | 3.24E-03 |
| 39 | GO:0004565: beta-galactosidase activity | 3.24E-03 |
| 40 | GO:0015035: protein disulfide oxidoreductase activity | 3.40E-03 |
| 41 | GO:0008266: poly(U) RNA binding | 3.52E-03 |
| 42 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 4.24E-03 |
| 43 | GO:0004857: enzyme inhibitor activity | 4.40E-03 |
| 44 | GO:0003714: transcription corepressor activity | 4.40E-03 |
| 45 | GO:0016491: oxidoreductase activity | 4.59E-03 |
| 46 | GO:0015079: potassium ion transmembrane transporter activity | 4.70E-03 |
| 47 | GO:0043424: protein histidine kinase binding | 4.70E-03 |
| 48 | GO:0004176: ATP-dependent peptidase activity | 5.02E-03 |
| 49 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 5.30E-03 |
| 50 | GO:0016853: isomerase activity | 7.42E-03 |
| 51 | GO:0000156: phosphorelay response regulator activity | 8.94E-03 |
| 52 | GO:0008233: peptidase activity | 1.07E-02 |
| 53 | GO:0008236: serine-type peptidase activity | 1.23E-02 |
| 54 | GO:0005509: calcium ion binding | 1.24E-02 |
| 55 | GO:0030145: manganese ion binding | 1.41E-02 |
| 56 | GO:0003746: translation elongation factor activity | 1.51E-02 |
| 57 | GO:0005215: transporter activity | 1.56E-02 |
| 58 | GO:0050661: NADP binding | 1.65E-02 |
| 59 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.01E-02 |
| 60 | GO:0008289: lipid binding | 2.25E-02 |
| 61 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 2.69E-02 |
| 62 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 2.69E-02 |
| 63 | GO:0005507: copper ion binding | 4.08E-02 |
| 64 | GO:0019825: oxygen binding | 4.08E-02 |
| 65 | GO:0008194: UDP-glycosyltransferase activity | 4.58E-02 |
| 66 | GO:0005525: GTP binding | 4.70E-02 |
| 67 | GO:0003743: translation initiation factor activity | 4.72E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010368: chloroplast isoamylase complex | 0.00E+00 |
| 2 | GO:0043235: receptor complex | 0.00E+00 |
| 3 | GO:0009507: chloroplast | 1.53E-26 |
| 4 | GO:0009534: chloroplast thylakoid | 2.16E-17 |
| 5 | GO:0009535: chloroplast thylakoid membrane | 7.28E-16 |
| 6 | GO:0009570: chloroplast stroma | 5.07E-10 |
| 7 | GO:0031977: thylakoid lumen | 1.39E-07 |
| 8 | GO:0009543: chloroplast thylakoid lumen | 1.84E-06 |
| 9 | GO:0009941: chloroplast envelope | 6.31E-06 |
| 10 | GO:0009654: photosystem II oxygen evolving complex | 7.07E-06 |
| 11 | GO:0019898: extrinsic component of membrane | 2.46E-05 |
| 12 | GO:0010287: plastoglobule | 3.69E-05 |
| 13 | GO:0032541: cortical endoplasmic reticulum | 8.09E-05 |
| 14 | GO:0031361: integral component of thylakoid membrane | 8.09E-05 |
| 15 | GO:0030095: chloroplast photosystem II | 1.70E-04 |
| 16 | GO:0009579: thylakoid | 2.46E-04 |
| 17 | GO:0033281: TAT protein transport complex | 3.24E-04 |
| 18 | GO:0009509: chromoplast | 3.24E-04 |
| 19 | GO:0009526: plastid envelope | 6.21E-04 |
| 20 | GO:0009898: cytoplasmic side of plasma membrane | 6.21E-04 |
| 21 | GO:0055035: plastid thylakoid membrane | 7.86E-04 |
| 22 | GO:0009533: chloroplast stromal thylakoid | 1.34E-03 |
| 23 | GO:0031969: chloroplast membrane | 1.65E-03 |
| 24 | GO:0005786: signal recognition particle, endoplasmic reticulum targeting | 1.76E-03 |
| 25 | GO:0009508: plastid chromosome | 3.24E-03 |
| 26 | GO:0042651: thylakoid membrane | 4.70E-03 |
| 27 | GO:0009295: nucleoid | 9.75E-03 |
| 28 | GO:0010008: endosome membrane | 2.57E-02 |
| 29 | GO:0009706: chloroplast inner membrane | 2.87E-02 |
| 30 | GO:0016020: membrane | 2.91E-02 |
| 31 | GO:0005623: cell | 3.43E-02 |
| 32 | GO:0005773: vacuole | 3.69E-02 |