GO Enrichment Analysis of Co-expressed Genes with
AT1G32200
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019323: pentose catabolic process | 0.00E+00 |
| 2 | GO:0017038: protein import | 0.00E+00 |
| 3 | GO:1900000: regulation of anthocyanin catabolic process | 0.00E+00 |
| 4 | GO:0090391: granum assembly | 9.91E-10 |
| 5 | GO:1901259: chloroplast rRNA processing | 2.20E-05 |
| 6 | GO:0010196: nonphotochemical quenching | 3.00E-05 |
| 7 | GO:0010027: thylakoid membrane organization | 4.74E-05 |
| 8 | GO:0010206: photosystem II repair | 6.25E-05 |
| 9 | GO:0044262: cellular carbohydrate metabolic process | 7.90E-05 |
| 10 | GO:0043686: co-translational protein modification | 7.90E-05 |
| 11 | GO:0034337: RNA folding | 7.90E-05 |
| 12 | GO:0009773: photosynthetic electron transport in photosystem I | 1.08E-04 |
| 13 | GO:0010207: photosystem II assembly | 1.65E-04 |
| 14 | GO:0010541: acropetal auxin transport | 1.89E-04 |
| 15 | GO:0010289: homogalacturonan biosynthetic process | 1.89E-04 |
| 16 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 1.89E-04 |
| 17 | GO:0015979: photosynthesis | 2.78E-04 |
| 18 | GO:1901527: abscisic acid-activated signaling pathway involved in stomatal movement | 3.17E-04 |
| 19 | GO:0010160: formation of animal organ boundary | 3.17E-04 |
| 20 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 3.42E-04 |
| 21 | GO:0010239: chloroplast mRNA processing | 4.58E-04 |
| 22 | GO:0043481: anthocyanin accumulation in tissues in response to UV light | 4.58E-04 |
| 23 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 4.58E-04 |
| 24 | GO:0071484: cellular response to light intensity | 4.58E-04 |
| 25 | GO:0010109: regulation of photosynthesis | 6.09E-04 |
| 26 | GO:0009828: plant-type cell wall loosening | 6.94E-04 |
| 27 | GO:0010438: cellular response to sulfur starvation | 7.72E-04 |
| 28 | GO:0031365: N-terminal protein amino acid modification | 7.72E-04 |
| 29 | GO:0060918: auxin transport | 9.42E-04 |
| 30 | GO:0009759: indole glucosinolate biosynthetic process | 9.42E-04 |
| 31 | GO:0015995: chlorophyll biosynthetic process | 9.59E-04 |
| 32 | GO:0009658: chloroplast organization | 1.22E-03 |
| 33 | GO:1900057: positive regulation of leaf senescence | 1.31E-03 |
| 34 | GO:0009772: photosynthetic electron transport in photosystem II | 1.31E-03 |
| 35 | GO:0048564: photosystem I assembly | 1.51E-03 |
| 36 | GO:0006353: DNA-templated transcription, termination | 1.51E-03 |
| 37 | GO:0009690: cytokinin metabolic process | 1.51E-03 |
| 38 | GO:0006605: protein targeting | 1.51E-03 |
| 39 | GO:0032544: plastid translation | 1.72E-03 |
| 40 | GO:0009245: lipid A biosynthetic process | 1.95E-03 |
| 41 | GO:0009664: plant-type cell wall organization | 2.12E-03 |
| 42 | GO:0006364: rRNA processing | 2.27E-03 |
| 43 | GO:0006535: cysteine biosynthetic process from serine | 2.41E-03 |
| 44 | GO:0006949: syncytium formation | 2.41E-03 |
| 45 | GO:1903507: negative regulation of nucleic acid-templated transcription | 2.66E-03 |
| 46 | GO:0002213: defense response to insect | 2.92E-03 |
| 47 | GO:0008361: regulation of cell size | 2.92E-03 |
| 48 | GO:0009718: anthocyanin-containing compound biosynthetic process | 3.18E-03 |
| 49 | GO:0010540: basipetal auxin transport | 3.45E-03 |
| 50 | GO:0000162: tryptophan biosynthetic process | 4.02E-03 |
| 51 | GO:0019344: cysteine biosynthetic process | 4.31E-03 |
| 52 | GO:0009735: response to cytokinin | 4.81E-03 |
| 53 | GO:0016998: cell wall macromolecule catabolic process | 4.92E-03 |
| 54 | GO:0030245: cellulose catabolic process | 5.24E-03 |
| 55 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 5.24E-03 |
| 56 | GO:0071369: cellular response to ethylene stimulus | 5.56E-03 |
| 57 | GO:0048443: stamen development | 5.89E-03 |
| 58 | GO:0045893: positive regulation of transcription, DNA-templated | 6.42E-03 |
| 59 | GO:0042631: cellular response to water deprivation | 6.57E-03 |
| 60 | GO:0080022: primary root development | 6.57E-03 |
| 61 | GO:0000413: protein peptidyl-prolyl isomerization | 6.57E-03 |
| 62 | GO:0009958: positive gravitropism | 6.92E-03 |
| 63 | GO:0015986: ATP synthesis coupled proton transport | 7.28E-03 |
| 64 | GO:0009646: response to absence of light | 7.28E-03 |
| 65 | GO:0000302: response to reactive oxygen species | 8.01E-03 |
| 66 | GO:0009826: unidimensional cell growth | 8.23E-03 |
| 67 | GO:0010090: trichome morphogenesis | 8.77E-03 |
| 68 | GO:0009639: response to red or far red light | 9.16E-03 |
| 69 | GO:0009567: double fertilization forming a zygote and endosperm | 9.16E-03 |
| 70 | GO:0080167: response to karrikin | 1.06E-02 |
| 71 | GO:0009627: systemic acquired resistance | 1.12E-02 |
| 72 | GO:0010411: xyloglucan metabolic process | 1.16E-02 |
| 73 | GO:0010218: response to far red light | 1.34E-02 |
| 74 | GO:0048527: lateral root development | 1.38E-02 |
| 75 | GO:0016051: carbohydrate biosynthetic process | 1.48E-02 |
| 76 | GO:0009637: response to blue light | 1.48E-02 |
| 77 | GO:0032259: methylation | 1.50E-02 |
| 78 | GO:0034599: cellular response to oxidative stress | 1.52E-02 |
| 79 | GO:0008152: metabolic process | 1.73E-02 |
| 80 | GO:0009640: photomorphogenesis | 1.77E-02 |
| 81 | GO:0010114: response to red light | 1.77E-02 |
| 82 | GO:0009926: auxin polar transport | 1.77E-02 |
| 83 | GO:0042546: cell wall biogenesis | 1.82E-02 |
| 84 | GO:0009409: response to cold | 1.94E-02 |
| 85 | GO:0031347: regulation of defense response | 2.02E-02 |
| 86 | GO:0009734: auxin-activated signaling pathway | 2.21E-02 |
| 87 | GO:0051603: proteolysis involved in cellular protein catabolic process | 2.24E-02 |
| 88 | GO:0048316: seed development | 2.52E-02 |
| 89 | GO:0009416: response to light stimulus | 2.79E-02 |
| 90 | GO:0009624: response to nematode | 2.81E-02 |
| 91 | GO:0042744: hydrogen peroxide catabolic process | 3.62E-02 |
| 92 | GO:0009790: embryo development | 3.68E-02 |
| 93 | GO:0009793: embryo development ending in seed dormancy | 3.78E-02 |
| 94 | GO:0006633: fatty acid biosynthetic process | 3.88E-02 |
| 95 | GO:0045490: pectin catabolic process | 4.14E-02 |
| 96 | GO:0009451: RNA modification | 4.21E-02 |
| 97 | GO:0009739: response to gibberellin | 4.49E-02 |
| 98 | GO:0010468: regulation of gene expression | 4.70E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0047807: cytokinin 7-beta-glucosyltransferase activity | 7.90E-05 |
| 2 | GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity | 7.90E-05 |
| 3 | GO:0042586: peptide deformylase activity | 7.90E-05 |
| 4 | GO:0080062: cytokinin 9-beta-glucosyltransferase activity | 7.90E-05 |
| 5 | GO:0050139: nicotinate-N-glucosyltransferase activity | 7.90E-05 |
| 6 | GO:0030794: (S)-coclaurine-N-methyltransferase activity | 7.90E-05 |
| 7 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.83E-04 |
| 8 | GO:0004750: ribulose-phosphate 3-epimerase activity | 1.89E-04 |
| 9 | GO:0005528: FK506 binding | 2.34E-04 |
| 10 | GO:0015462: ATPase-coupled protein transmembrane transporter activity | 3.17E-04 |
| 11 | GO:0016851: magnesium chelatase activity | 4.58E-04 |
| 12 | GO:0001872: (1->3)-beta-D-glucan binding | 4.58E-04 |
| 13 | GO:0019843: rRNA binding | 4.76E-04 |
| 14 | GO:0004130: cytochrome-c peroxidase activity | 9.42E-04 |
| 15 | GO:0031177: phosphopantetheine binding | 9.42E-04 |
| 16 | GO:0000035: acyl binding | 1.12E-03 |
| 17 | GO:0004124: cysteine synthase activity | 1.12E-03 |
| 18 | GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process | 1.51E-03 |
| 19 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 2.94E-03 |
| 20 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 2.94E-03 |
| 21 | GO:0004565: beta-galactosidase activity | 3.18E-03 |
| 22 | GO:0010329: auxin efflux transmembrane transporter activity | 3.18E-03 |
| 23 | GO:0031072: heat shock protein binding | 3.18E-03 |
| 24 | GO:0009982: pseudouridine synthase activity | 3.18E-03 |
| 25 | GO:0003714: transcription corepressor activity | 4.31E-03 |
| 26 | GO:0004252: serine-type endopeptidase activity | 4.45E-03 |
| 27 | GO:0043424: protein histidine kinase binding | 4.61E-03 |
| 28 | GO:0004707: MAP kinase activity | 4.92E-03 |
| 29 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 5.24E-03 |
| 30 | GO:0030570: pectate lyase activity | 5.56E-03 |
| 31 | GO:0008810: cellulase activity | 5.56E-03 |
| 32 | GO:0003756: protein disulfide isomerase activity | 5.89E-03 |
| 33 | GO:0008194: UDP-glycosyltransferase activity | 6.18E-03 |
| 34 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 6.92E-03 |
| 35 | GO:0010181: FMN binding | 7.28E-03 |
| 36 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 8.01E-03 |
| 37 | GO:0008168: methyltransferase activity | 8.23E-03 |
| 38 | GO:0016788: hydrolase activity, acting on ester bonds | 8.71E-03 |
| 39 | GO:0030247: polysaccharide binding | 1.16E-02 |
| 40 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 1.16E-02 |
| 41 | GO:0008236: serine-type peptidase activity | 1.21E-02 |
| 42 | GO:0004185: serine-type carboxypeptidase activity | 1.77E-02 |
| 43 | GO:0043621: protein self-association | 1.87E-02 |
| 44 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.87E-02 |
| 45 | GO:0003723: RNA binding | 2.18E-02 |
| 46 | GO:0003777: microtubule motor activity | 2.35E-02 |
| 47 | GO:0051082: unfolded protein binding | 2.81E-02 |
| 48 | GO:0008026: ATP-dependent helicase activity | 2.93E-02 |
| 49 | GO:0016829: lyase activity | 3.49E-02 |
| 50 | GO:0030170: pyridoxal phosphate binding | 3.55E-02 |
| 51 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 3.68E-02 |
| 52 | GO:0030246: carbohydrate binding | 3.75E-02 |
| 53 | GO:0008017: microtubule binding | 4.28E-02 |
| 54 | GO:0003743: translation initiation factor activity | 4.63E-02 |
| 55 | GO:0042802: identical protein binding | 4.91E-02 |
| 56 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 4.91E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009515: granal stacked thylakoid | 0.00E+00 |
| 2 | GO:0009535: chloroplast thylakoid membrane | 1.23E-14 |
| 3 | GO:0009507: chloroplast | 4.14E-14 |
| 4 | GO:0009534: chloroplast thylakoid | 5.81E-13 |
| 5 | GO:0009579: thylakoid | 1.47E-11 |
| 6 | GO:0009543: chloroplast thylakoid lumen | 2.65E-11 |
| 7 | GO:0009570: chloroplast stroma | 4.50E-09 |
| 8 | GO:0009941: chloroplast envelope | 6.97E-08 |
| 9 | GO:0030095: chloroplast photosystem II | 3.14E-06 |
| 10 | GO:0031977: thylakoid lumen | 5.43E-06 |
| 11 | GO:0030093: chloroplast photosystem I | 1.89E-04 |
| 12 | GO:0009654: photosystem II oxygen evolving complex | 2.59E-04 |
| 13 | GO:0010007: magnesium chelatase complex | 3.17E-04 |
| 14 | GO:0009509: chromoplast | 3.17E-04 |
| 15 | GO:0009706: chloroplast inner membrane | 3.57E-04 |
| 16 | GO:0005618: cell wall | 5.15E-04 |
| 17 | GO:0019898: extrinsic component of membrane | 5.39E-04 |
| 18 | GO:0010319: stromule | 7.35E-04 |
| 19 | GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1) | 9.42E-04 |
| 20 | GO:0009533: chloroplast stromal thylakoid | 1.31E-03 |
| 21 | GO:0008180: COP9 signalosome | 1.95E-03 |
| 22 | GO:0055028: cortical microtubule | 2.41E-03 |
| 23 | GO:0032040: small-subunit processome | 2.92E-03 |
| 24 | GO:0009508: plastid chromosome | 3.18E-03 |
| 25 | GO:0048046: apoplast | 5.84E-03 |
| 26 | GO:0009523: photosystem II | 7.64E-03 |
| 27 | GO:0009295: nucleoid | 9.56E-03 |
| 28 | GO:0005576: extracellular region | 1.10E-02 |
| 29 | GO:0019005: SCF ubiquitin ligase complex | 1.25E-02 |
| 30 | GO:0043231: intracellular membrane-bounded organelle | 1.73E-02 |
| 31 | GO:0000502: proteasome complex | 2.19E-02 |
| 32 | GO:0010287: plastoglobule | 3.17E-02 |
| 33 | GO:0005802: trans-Golgi network | 4.45E-02 |