co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G31910

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0002191: cap-dependent translational initiation	0.00E+00
2	GO:0043419: urea catabolic process	0.00E+00
3	GO:0031564: transcription antitermination	0.00E+00
4	GO:0000303: response to superoxide	3.90E-05
5	GO:0006422: aspartyl-tRNA aminoacylation	3.90E-05
6	GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic	3.90E-05
7	GO:2000072: regulation of defense response to fungus, incompatible interaction	9.72E-05
8	GO:0043631: RNA polyadenylation	9.72E-05
9	GO:0030010: establishment of cell polarity	9.72E-05
10	GO:0042780: tRNA 3'-end processing	1.68E-04
11	GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic	1.68E-04
12	GO:0010193: response to ozone	2.32E-04
13	GO:0001676: long-chain fatty acid metabolic process	2.48E-04
14	GO:0000187: activation of MAPK activity	2.48E-04
15	GO:0006809: nitric oxide biosynthetic process	2.48E-04
16	GO:0072583: clathrin-dependent endocytosis	2.48E-04
17	GO:2000038: regulation of stomatal complex development	3.33E-04
18	GO:0031087: deadenylation-independent decapping of nuclear-transcribed mRNA	3.33E-04
19	GO:0001731: formation of translation preinitiation complex	5.22E-04
20	GO:0009867: jasmonic acid mediated signaling pathway	5.52E-04
21	GO:2000037: regulation of stomatal complex patterning	6.22E-04
22	GO:0006491: N-glycan processing	8.37E-04
23	GO:0006002: fructose 6-phosphate metabolic process	9.50E-04
24	GO:0009880: embryonic pattern specification	9.50E-04
25	GO:0006261: DNA-dependent DNA replication	9.50E-04
26	GO:0009821: alkaloid biosynthetic process	1.07E-03
27	GO:0046685: response to arsenic-containing substance	1.07E-03
28	GO:0042761: very long-chain fatty acid biosynthetic process	1.19E-03
29	GO:0006378: mRNA polyadenylation	1.44E-03
30	GO:0012501: programmed cell death	1.58E-03
31	GO:0010229: inflorescence development	1.72E-03
32	GO:0010102: lateral root morphogenesis	1.72E-03
33	GO:0006807: nitrogen compound metabolic process	1.72E-03
34	GO:0006446: regulation of translational initiation	1.86E-03
35	GO:0009790: embryo development	1.89E-03
36	GO:0070588: calcium ion transmembrane transport	2.01E-03
37	GO:0010053: root epidermal cell differentiation	2.01E-03
38	GO:2000377: regulation of reactive oxygen species metabolic process	2.32E-03
39	GO:0000027: ribosomal large subunit assembly	2.32E-03
40	GO:0010187: negative regulation of seed germination	2.32E-03
41	GO:0061077: chaperone-mediated protein folding	2.64E-03
42	GO:0009814: defense response, incompatible interaction	2.80E-03
43	GO:0010227: floral organ abscission	2.97E-03
44	GO:0042254: ribosome biogenesis	3.48E-03
45	GO:0000413: protein peptidyl-prolyl isomerization	3.50E-03
46	GO:0042391: regulation of membrane potential	3.50E-03
47	GO:0006970: response to osmotic stress	3.68E-03
48	GO:0009723: response to ethylene	3.95E-03
49	GO:0006623: protein targeting to vacuole	4.06E-03
50	GO:0016032: viral process	4.45E-03
51	GO:0030163: protein catabolic process	4.65E-03
52	GO:0009615: response to virus	5.47E-03
53	GO:0009816: defense response to bacterium, incompatible interaction	5.69E-03
54	GO:0006397: mRNA processing	6.50E-03
55	GO:0048364: root development	6.50E-03
56	GO:0006499: N-terminal protein myristoylation	7.04E-03
57	GO:0048527: lateral root development	7.27E-03
58	GO:0009631: cold acclimation	7.27E-03
59	GO:0045087: innate immune response	7.75E-03
60	GO:0006631: fatty acid metabolic process	8.74E-03
61	GO:0009734: auxin-activated signaling pathway	8.77E-03
62	GO:0000165: MAPK cascade	1.06E-02
63	GO:0009736: cytokinin-activated signaling pathway	1.14E-02
64	GO:0006486: protein glycosylation	1.14E-02
65	GO:0006096: glycolytic process	1.28E-02
66	GO:0009626: plant-type hypersensitive response	1.34E-02
67	GO:0009620: response to fungus	1.37E-02
68	GO:0009553: embryo sac development	1.43E-02
69	GO:0009624: response to nematode	1.46E-02
70	GO:0006396: RNA processing	1.49E-02
71	GO:0000398: mRNA splicing, via spliceosome	1.62E-02
72	GO:0009058: biosynthetic process	1.78E-02
73	GO:0009845: seed germination	1.81E-02
74	GO:0009651: response to salt stress	1.89E-02
75	GO:0006413: translational initiation	2.05E-02
76	GO:0010150: leaf senescence	2.16E-02
77	GO:0009414: response to water deprivation	2.19E-02
78	GO:0008380: RNA splicing	2.45E-02
79	GO:0009826: unidimensional cell growth	2.86E-02
80	GO:0006886: intracellular protein transport	3.99E-02
81	GO:0009751: response to salicylic acid	4.48E-02
82	GO:0009408: response to heat	4.53E-02
83	GO:0009753: response to jasmonic acid	4.76E-02

Rank	GO Term	Adjusted P value
1	GO:0098808: mRNA cap binding	0.00E+00
2	GO:0001072: transcription antitermination factor activity, RNA binding	0.00E+00
3	GO:0009039: urease activity	0.00E+00
4	GO:0000166: nucleotide binding	1.15E-06
5	GO:0032050: clathrin heavy chain binding	3.90E-05
6	GO:0015085: calcium ion transmembrane transporter activity	3.90E-05
7	GO:0004815: aspartate-tRNA ligase activity	3.90E-05
8	GO:0016891: endoribonuclease activity, producing 5'-phosphomonoesters	9.72E-05
9	GO:0016151: nickel cation binding	1.68E-04
10	GO:0042781: 3'-tRNA processing endoribonuclease activity	1.68E-04
11	GO:0004652: polynucleotide adenylyltransferase activity	2.48E-04
12	GO:0031176: endo-1,4-beta-xylanase activity	2.48E-04
13	GO:0004571: mannosyl-oligosaccharide 1,2-alpha-mannosidase activity	2.48E-04
14	GO:0004040: amidase activity	4.25E-04
15	GO:0004559: alpha-mannosidase activity	6.22E-04
16	GO:0102391: decanoate--CoA ligase activity	6.22E-04
17	GO:0003950: NAD+ ADP-ribosyltransferase activity	6.22E-04
18	GO:0008143: poly(A) binding	7.28E-04
19	GO:0004467: long-chain fatty acid-CoA ligase activity	7.28E-04
20	GO:0003872: 6-phosphofructokinase activity	7.28E-04
21	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	8.17E-04
22	GO:0004708: MAP kinase kinase activity	8.37E-04
23	GO:0016844: strictosidine synthase activity	1.19E-03
24	GO:0004713: protein tyrosine kinase activity	1.31E-03
25	GO:0005388: calcium-transporting ATPase activity	1.72E-03
26	GO:0003712: transcription cofactor activity	2.01E-03
27	GO:0030552: cAMP binding	2.01E-03
28	GO:0030553: cGMP binding	2.01E-03
29	GO:0005528: FK506 binding	2.32E-03
30	GO:0005216: ion channel activity	2.48E-03
31	GO:0016779: nucleotidyltransferase activity	2.80E-03
32	GO:0005524: ATP binding	2.89E-03
33	GO:0005249: voltage-gated potassium channel activity	3.50E-03
34	GO:0030551: cyclic nucleotide binding	3.50E-03
35	GO:0004527: exonuclease activity	3.69E-03
36	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	5.05E-03
37	GO:0004004: ATP-dependent RNA helicase activity	6.13E-03
38	GO:0003697: single-stranded DNA binding	7.75E-03
39	GO:0004712: protein serine/threonine/tyrosine kinase activity	8.24E-03
40	GO:0005198: structural molecule activity	1.00E-02
41	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	1.14E-02
42	GO:0003690: double-stranded DNA binding	1.17E-02
43	GO:0005515: protein binding	1.56E-02
44	GO:0004386: helicase activity	1.56E-02
45	GO:0003723: RNA binding	1.58E-02
46	GO:0005516: calmodulin binding	1.67E-02
47	GO:0019843: rRNA binding	1.72E-02
48	GO:0005509: calcium ion binding	2.07E-02
49	GO:0003743: translation initiation factor activity	2.41E-02
50	GO:0003824: catalytic activity	2.47E-02
51	GO:0016788: hydrolase activity, acting on ester bonds	2.98E-02

Rank	GO Term	Adjusted P value
1	GO:0005945: 6-phosphofructokinase complex	4.25E-04
2	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	4.34E-04
3	GO:0016282: eukaryotic 43S preinitiation complex	5.22E-04
4	GO:0033290: eukaryotic 48S preinitiation complex	6.22E-04
5	GO:0016363: nuclear matrix	6.22E-04
6	GO:0010494: cytoplasmic stress granule	1.07E-03
7	GO:0005829: cytosol	1.10E-03
8	GO:0005834: heterotrimeric G-protein complex	1.16E-03
9	GO:0005887: integral component of plasma membrane	1.20E-03
10	GO:0030125: clathrin vesicle coat	1.31E-03
11	GO:0017119: Golgi transport complex	1.31E-03
12	GO:0005783: endoplasmic reticulum	3.52E-03
13	GO:0000932: P-body	5.47E-03
14	GO:0019005: SCF ubiquitin ligase complex	6.58E-03
15	GO:0005737: cytoplasm	7.66E-03
16	GO:0005681: spliceosomal complex	1.28E-02
17	GO:0016607: nuclear speck	1.31E-02
18	GO:0005802: trans-Golgi network	1.78E-02
19	GO:0005794: Golgi apparatus	1.81E-02
20	GO:0005768: endosome	2.02E-02
21	GO:0005840: ribosome	2.36E-02
22	GO:0000139: Golgi membrane	3.04E-02
23	GO:0005789: endoplasmic reticulum membrane	3.43E-02
24	GO:0005730: nucleolus	3.80E-02