GO Enrichment Analysis of Co-expressed Genes with
AT1G30690
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0035674: tricarboxylic acid transmembrane transport | 0.00E+00 |
| 2 | GO:0010394: homogalacturonan metabolic process | 0.00E+00 |
| 3 | GO:0015739: sialic acid transport | 0.00E+00 |
| 4 | GO:0010027: thylakoid membrane organization | 3.76E-07 |
| 5 | GO:0071555: cell wall organization | 8.81E-07 |
| 6 | GO:0090391: granum assembly | 5.48E-06 |
| 7 | GO:0045038: protein import into chloroplast thylakoid membrane | 3.81E-05 |
| 8 | GO:0006869: lipid transport | 5.19E-05 |
| 9 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 5.65E-05 |
| 10 | GO:1901259: chloroplast rRNA processing | 7.89E-05 |
| 11 | GO:0010196: nonphotochemical quenching | 1.05E-04 |
| 12 | GO:0032544: plastid translation | 1.69E-04 |
| 13 | GO:0045488: pectin metabolic process | 1.75E-04 |
| 14 | GO:1902458: positive regulation of stomatal opening | 1.75E-04 |
| 15 | GO:0006835: dicarboxylic acid transport | 1.75E-04 |
| 16 | GO:0071588: hydrogen peroxide mediated signaling pathway | 1.75E-04 |
| 17 | GO:0060627: regulation of vesicle-mediated transport | 1.75E-04 |
| 18 | GO:1904966: positive regulation of vitamin E biosynthetic process | 1.75E-04 |
| 19 | GO:1904964: positive regulation of phytol biosynthetic process | 1.75E-04 |
| 20 | GO:0043686: co-translational protein modification | 1.75E-04 |
| 21 | GO:0009735: response to cytokinin | 2.18E-04 |
| 22 | GO:0015995: chlorophyll biosynthetic process | 2.87E-04 |
| 23 | GO:0030244: cellulose biosynthetic process | 3.29E-04 |
| 24 | GO:0009773: photosynthetic electron transport in photosystem I | 3.36E-04 |
| 25 | GO:0006729: tetrahydrobiopterin biosynthetic process | 3.96E-04 |
| 26 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 3.96E-04 |
| 27 | GO:0010289: homogalacturonan biosynthetic process | 3.96E-04 |
| 28 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 3.96E-04 |
| 29 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 3.96E-04 |
| 30 | GO:0043255: regulation of carbohydrate biosynthetic process | 3.96E-04 |
| 31 | GO:0010115: regulation of abscisic acid biosynthetic process | 3.96E-04 |
| 32 | GO:0009825: multidimensional cell growth | 5.54E-04 |
| 33 | GO:0010025: wax biosynthetic process | 6.18E-04 |
| 34 | GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition | 6.47E-04 |
| 35 | GO:0007017: microtubule-based process | 7.52E-04 |
| 36 | GO:0042538: hyperosmotic salinity response | 8.23E-04 |
| 37 | GO:0016998: cell wall macromolecule catabolic process | 8.23E-04 |
| 38 | GO:0006166: purine ribonucleoside salvage | 9.23E-04 |
| 39 | GO:0051639: actin filament network formation | 9.23E-04 |
| 40 | GO:0010239: chloroplast mRNA processing | 9.23E-04 |
| 41 | GO:1901332: negative regulation of lateral root development | 9.23E-04 |
| 42 | GO:0006168: adenine salvage | 9.23E-04 |
| 43 | GO:0015689: molybdate ion transport | 1.22E-03 |
| 44 | GO:0051764: actin crosslink formation | 1.22E-03 |
| 45 | GO:0006085: acetyl-CoA biosynthetic process | 1.22E-03 |
| 46 | GO:0006183: GTP biosynthetic process | 1.22E-03 |
| 47 | GO:0031122: cytoplasmic microtubule organization | 1.22E-03 |
| 48 | GO:0042335: cuticle development | 1.23E-03 |
| 49 | GO:0000413: protein peptidyl-prolyl isomerization | 1.23E-03 |
| 50 | GO:0010182: sugar mediated signaling pathway | 1.32E-03 |
| 51 | GO:0045489: pectin biosynthetic process | 1.32E-03 |
| 52 | GO:0031365: N-terminal protein amino acid modification | 1.56E-03 |
| 53 | GO:0044209: AMP salvage | 1.56E-03 |
| 54 | GO:0010236: plastoquinone biosynthetic process | 1.56E-03 |
| 55 | GO:0010405: arabinogalactan protein metabolic process | 1.91E-03 |
| 56 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 1.91E-03 |
| 57 | GO:0035435: phosphate ion transmembrane transport | 1.91E-03 |
| 58 | GO:0010190: cytochrome b6f complex assembly | 1.91E-03 |
| 59 | GO:0010337: regulation of salicylic acid metabolic process | 1.91E-03 |
| 60 | GO:0006561: proline biosynthetic process | 1.91E-03 |
| 61 | GO:0006629: lipid metabolic process | 2.19E-03 |
| 62 | GO:0010019: chloroplast-nucleus signaling pathway | 2.30E-03 |
| 63 | GO:0009955: adaxial/abaxial pattern specification | 2.30E-03 |
| 64 | GO:0010189: vitamin E biosynthetic process | 2.30E-03 |
| 65 | GO:0009395: phospholipid catabolic process | 2.70E-03 |
| 66 | GO:0006614: SRP-dependent cotranslational protein targeting to membrane | 2.70E-03 |
| 67 | GO:0016559: peroxisome fission | 3.13E-03 |
| 68 | GO:0007155: cell adhesion | 3.13E-03 |
| 69 | GO:0008610: lipid biosynthetic process | 3.13E-03 |
| 70 | GO:0006353: DNA-templated transcription, termination | 3.13E-03 |
| 71 | GO:2000070: regulation of response to water deprivation | 3.13E-03 |
| 72 | GO:0015996: chlorophyll catabolic process | 3.58E-03 |
| 73 | GO:0009827: plant-type cell wall modification | 3.58E-03 |
| 74 | GO:0007186: G-protein coupled receptor signaling pathway | 3.58E-03 |
| 75 | GO:0015780: nucleotide-sugar transport | 4.05E-03 |
| 76 | GO:0042761: very long-chain fatty acid biosynthetic process | 4.54E-03 |
| 77 | GO:0009658: chloroplast organization | 4.83E-03 |
| 78 | GO:0042254: ribosome biogenesis | 4.94E-03 |
| 79 | GO:0019538: protein metabolic process | 5.05E-03 |
| 80 | GO:0006535: cysteine biosynthetic process from serine | 5.05E-03 |
| 81 | GO:0006032: chitin catabolic process | 5.05E-03 |
| 82 | GO:0009688: abscisic acid biosynthetic process | 5.05E-03 |
| 83 | GO:0006415: translational termination | 5.58E-03 |
| 84 | GO:0009073: aromatic amino acid family biosynthetic process | 5.58E-03 |
| 85 | GO:0009750: response to fructose | 5.58E-03 |
| 86 | GO:0045037: protein import into chloroplast stroma | 6.13E-03 |
| 87 | GO:0009809: lignin biosynthetic process | 6.66E-03 |
| 88 | GO:0009718: anthocyanin-containing compound biosynthetic process | 6.70E-03 |
| 89 | GO:0010102: lateral root morphogenesis | 6.70E-03 |
| 90 | GO:0010020: chloroplast fission | 7.28E-03 |
| 91 | GO:0010207: photosystem II assembly | 7.28E-03 |
| 92 | GO:0006457: protein folding | 7.74E-03 |
| 93 | GO:0006096: glycolytic process | 7.88E-03 |
| 94 | GO:0010053: root epidermal cell differentiation | 7.89E-03 |
| 95 | GO:0010167: response to nitrate | 7.89E-03 |
| 96 | GO:0006810: transport | 8.20E-03 |
| 97 | GO:0009833: plant-type primary cell wall biogenesis | 8.51E-03 |
| 98 | GO:0019344: cysteine biosynthetic process | 9.15E-03 |
| 99 | GO:0051017: actin filament bundle assembly | 9.15E-03 |
| 100 | GO:0009695: jasmonic acid biosynthetic process | 9.80E-03 |
| 101 | GO:0006412: translation | 1.05E-02 |
| 102 | GO:0031408: oxylipin biosynthetic process | 1.05E-02 |
| 103 | GO:0030245: cellulose catabolic process | 1.12E-02 |
| 104 | GO:0009294: DNA mediated transformation | 1.19E-02 |
| 105 | GO:0040007: growth | 1.19E-02 |
| 106 | GO:0019722: calcium-mediated signaling | 1.26E-02 |
| 107 | GO:0042744: hydrogen peroxide catabolic process | 1.36E-02 |
| 108 | GO:0007623: circadian rhythm | 1.65E-02 |
| 109 | GO:0071554: cell wall organization or biogenesis | 1.72E-02 |
| 110 | GO:0000302: response to reactive oxygen species | 1.72E-02 |
| 111 | GO:0010583: response to cyclopentenone | 1.81E-02 |
| 112 | GO:0009567: double fertilization forming a zygote and endosperm | 1.98E-02 |
| 113 | GO:0007267: cell-cell signaling | 2.06E-02 |
| 114 | GO:0009416: response to light stimulus | 2.15E-02 |
| 115 | GO:0009409: response to cold | 2.39E-02 |
| 116 | GO:0042128: nitrate assimilation | 2.42E-02 |
| 117 | GO:0010411: xyloglucan metabolic process | 2.52E-02 |
| 118 | GO:0018298: protein-chromophore linkage | 2.71E-02 |
| 119 | GO:0000160: phosphorelay signal transduction system | 2.80E-02 |
| 120 | GO:0010311: lateral root formation | 2.80E-02 |
| 121 | GO:0009832: plant-type cell wall biogenesis | 2.80E-02 |
| 122 | GO:0005975: carbohydrate metabolic process | 2.83E-02 |
| 123 | GO:0009834: plant-type secondary cell wall biogenesis | 2.90E-02 |
| 124 | GO:0009407: toxin catabolic process | 2.90E-02 |
| 125 | GO:0009631: cold acclimation | 3.00E-02 |
| 126 | GO:0016051: carbohydrate biosynthetic process | 3.20E-02 |
| 127 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 3.27E-02 |
| 128 | GO:0034599: cellular response to oxidative stress | 3.31E-02 |
| 129 | GO:0006839: mitochondrial transport | 3.52E-02 |
| 130 | GO:0015979: photosynthesis | 3.61E-02 |
| 131 | GO:0042546: cell wall biogenesis | 3.95E-02 |
| 132 | GO:0008643: carbohydrate transport | 4.06E-02 |
| 133 | GO:0009636: response to toxic substance | 4.17E-02 |
| 134 | GO:0009737: response to abscisic acid | 4.61E-02 |
| 135 | GO:0009408: response to heat | 4.65E-02 |
| 136 | GO:0006364: rRNA processing | 4.74E-02 |
| 137 | GO:0009736: cytokinin-activated signaling pathway | 4.74E-02 |
| 138 | GO:0006857: oligopeptide transport | 4.97E-02 |
| 139 | GO:0009414: response to water deprivation | 5.00E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019146: arabinose-5-phosphate isomerase activity | 0.00E+00 |
| 2 | GO:0015142: tricarboxylic acid transmembrane transporter activity | 0.00E+00 |
| 3 | GO:0005048: signal sequence binding | 0.00E+00 |
| 4 | GO:0005456: CMP-N-acetylneuraminate transmembrane transporter activity | 0.00E+00 |
| 5 | GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity | 0.00E+00 |
| 6 | GO:0010301: xanthoxin dehydrogenase activity | 0.00E+00 |
| 7 | GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity | 0.00E+00 |
| 8 | GO:0102550: 2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity | 0.00E+00 |
| 9 | GO:0015136: sialic acid transmembrane transporter activity | 0.00E+00 |
| 10 | GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity | 2.35E-05 |
| 11 | GO:0019843: rRNA binding | 2.60E-05 |
| 12 | GO:0003924: GTPase activity | 6.97E-05 |
| 13 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 7.68E-05 |
| 14 | GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity | 1.75E-04 |
| 15 | GO:0047259: glucomannan 4-beta-mannosyltransferase activity | 1.75E-04 |
| 16 | GO:0046912: transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer | 1.75E-04 |
| 17 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 1.75E-04 |
| 18 | GO:0042586: peptide deformylase activity | 1.75E-04 |
| 19 | GO:0008568: microtubule-severing ATPase activity | 1.75E-04 |
| 20 | GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity | 1.75E-04 |
| 21 | GO:0004321: fatty-acyl-CoA synthase activity | 1.75E-04 |
| 22 | GO:0004163: diphosphomevalonate decarboxylase activity | 1.75E-04 |
| 23 | GO:0003938: IMP dehydrogenase activity | 3.96E-04 |
| 24 | GO:0008805: carbon-monoxide oxygenase activity | 3.96E-04 |
| 25 | GO:0005310: dicarboxylic acid transmembrane transporter activity | 6.47E-04 |
| 26 | GO:0005525: GTP binding | 7.40E-04 |
| 27 | GO:0008289: lipid binding | 7.98E-04 |
| 28 | GO:0017077: oxidative phosphorylation uncoupler activity | 9.23E-04 |
| 29 | GO:0001872: (1->3)-beta-D-glucan binding | 9.23E-04 |
| 30 | GO:0003878: ATP citrate synthase activity | 9.23E-04 |
| 31 | GO:0003999: adenine phosphoribosyltransferase activity | 9.23E-04 |
| 32 | GO:0016851: magnesium chelatase activity | 9.23E-04 |
| 33 | GO:0016149: translation release factor activity, codon specific | 9.23E-04 |
| 34 | GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity | 9.23E-04 |
| 35 | GO:0080032: methyl jasmonate esterase activity | 1.22E-03 |
| 36 | GO:0052793: pectin acetylesterase activity | 1.22E-03 |
| 37 | GO:0015098: molybdate ion transmembrane transporter activity | 1.22E-03 |
| 38 | GO:0043495: protein anchor | 1.22E-03 |
| 39 | GO:0004040: amidase activity | 1.56E-03 |
| 40 | GO:0080030: methyl indole-3-acetate esterase activity | 1.91E-03 |
| 41 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 1.91E-03 |
| 42 | GO:0004130: cytochrome-c peroxidase activity | 1.91E-03 |
| 43 | GO:0016688: L-ascorbate peroxidase activity | 1.91E-03 |
| 44 | GO:0016759: cellulose synthase activity | 1.96E-03 |
| 45 | GO:0005200: structural constituent of cytoskeleton | 2.09E-03 |
| 46 | GO:0016413: O-acetyltransferase activity | 2.21E-03 |
| 47 | GO:0004124: cysteine synthase activity | 2.30E-03 |
| 48 | GO:0051920: peroxiredoxin activity | 2.30E-03 |
| 49 | GO:0051753: mannan synthase activity | 2.30E-03 |
| 50 | GO:0005338: nucleotide-sugar transmembrane transporter activity | 2.70E-03 |
| 51 | GO:0019899: enzyme binding | 2.70E-03 |
| 52 | GO:0004620: phospholipase activity | 2.70E-03 |
| 53 | GO:0030247: polysaccharide binding | 2.75E-03 |
| 54 | GO:0016209: antioxidant activity | 3.13E-03 |
| 55 | GO:0008312: 7S RNA binding | 3.13E-03 |
| 56 | GO:0052747: sinapyl alcohol dehydrogenase activity | 3.13E-03 |
| 57 | GO:0003747: translation release factor activity | 4.05E-03 |
| 58 | GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors | 4.05E-03 |
| 59 | GO:0016207: 4-coumarate-CoA ligase activity | 4.05E-03 |
| 60 | GO:0016788: hydrolase activity, acting on ester bonds | 4.94E-03 |
| 61 | GO:0004568: chitinase activity | 5.05E-03 |
| 62 | GO:0047372: acylglycerol lipase activity | 5.58E-03 |
| 63 | GO:0045551: cinnamyl-alcohol dehydrogenase activity | 6.13E-03 |
| 64 | GO:0009982: pseudouridine synthase activity | 6.70E-03 |
| 65 | GO:0015114: phosphate ion transmembrane transporter activity | 6.70E-03 |
| 66 | GO:0004565: beta-galactosidase activity | 6.70E-03 |
| 67 | GO:0008081: phosphoric diester hydrolase activity | 6.70E-03 |
| 68 | GO:0004022: alcohol dehydrogenase (NAD) activity | 6.70E-03 |
| 69 | GO:0052689: carboxylic ester hydrolase activity | 7.20E-03 |
| 70 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 7.28E-03 |
| 71 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 7.97E-03 |
| 72 | GO:0005528: FK506 binding | 9.15E-03 |
| 73 | GO:0043424: protein histidine kinase binding | 9.80E-03 |
| 74 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 1.12E-02 |
| 75 | GO:0016760: cellulose synthase (UDP-forming) activity | 1.19E-02 |
| 76 | GO:0022891: substrate-specific transmembrane transporter activity | 1.19E-02 |
| 77 | GO:0008810: cellulase activity | 1.19E-02 |
| 78 | GO:0003735: structural constituent of ribosome | 1.39E-02 |
| 79 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 1.72E-02 |
| 80 | GO:0004518: nuclease activity | 1.81E-02 |
| 81 | GO:0051015: actin filament binding | 1.89E-02 |
| 82 | GO:0000156: phosphorelay response regulator activity | 1.89E-02 |
| 83 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 2.06E-02 |
| 84 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 2.09E-02 |
| 85 | GO:0042802: identical protein binding | 2.09E-02 |
| 86 | GO:0016168: chlorophyll binding | 2.33E-02 |
| 87 | GO:0000287: magnesium ion binding | 2.50E-02 |
| 88 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 2.52E-02 |
| 89 | GO:0004601: peroxidase activity | 2.55E-02 |
| 90 | GO:0008236: serine-type peptidase activity | 2.61E-02 |
| 91 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 2.61E-02 |
| 92 | GO:0030246: carbohydrate binding | 3.12E-02 |
| 93 | GO:0003993: acid phosphatase activity | 3.31E-02 |
| 94 | GO:0016757: transferase activity, transferring glycosyl groups | 3.42E-02 |
| 95 | GO:0004364: glutathione transferase activity | 3.73E-02 |
| 96 | GO:0004871: signal transducer activity | 3.96E-02 |
| 97 | GO:0043621: protein self-association | 4.06E-02 |
| 98 | GO:0015293: symporter activity | 4.17E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010240: plastid pyruvate dehydrogenase complex | 0.00E+00 |
| 2 | GO:0009515: granal stacked thylakoid | 0.00E+00 |
| 3 | GO:0009507: chloroplast | 5.85E-11 |
| 4 | GO:0009534: chloroplast thylakoid | 4.00E-10 |
| 5 | GO:0009535: chloroplast thylakoid membrane | 6.70E-08 |
| 6 | GO:0009570: chloroplast stroma | 1.14E-07 |
| 7 | GO:0046658: anchored component of plasma membrane | 5.71E-07 |
| 8 | GO:0009941: chloroplast envelope | 6.36E-07 |
| 9 | GO:0005794: Golgi apparatus | 3.08E-06 |
| 10 | GO:0005802: trans-Golgi network | 3.08E-06 |
| 11 | GO:0005768: endosome | 5.14E-06 |
| 12 | GO:0009543: chloroplast thylakoid lumen | 2.60E-05 |
| 13 | GO:0048046: apoplast | 3.47E-05 |
| 14 | GO:0009579: thylakoid | 7.11E-05 |
| 15 | GO:0009533: chloroplast stromal thylakoid | 1.05E-04 |
| 16 | GO:0000139: Golgi membrane | 1.33E-04 |
| 17 | GO:0031225: anchored component of membrane | 1.45E-04 |
| 18 | GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex | 1.75E-04 |
| 19 | GO:0005618: cell wall | 1.99E-04 |
| 20 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 2.06E-04 |
| 21 | GO:0005886: plasma membrane | 2.57E-04 |
| 22 | GO:0080085: signal recognition particle, chloroplast targeting | 3.96E-04 |
| 23 | GO:0009505: plant-type cell wall | 4.70E-04 |
| 24 | GO:0031977: thylakoid lumen | 5.59E-04 |
| 25 | GO:0009528: plastid inner membrane | 6.47E-04 |
| 26 | GO:0010007: magnesium chelatase complex | 6.47E-04 |
| 27 | GO:0009509: chromoplast | 6.47E-04 |
| 28 | GO:0015630: microtubule cytoskeleton | 9.23E-04 |
| 29 | GO:0032432: actin filament bundle | 9.23E-04 |
| 30 | GO:0009346: citrate lyase complex | 9.23E-04 |
| 31 | GO:0009527: plastid outer membrane | 1.22E-03 |
| 32 | GO:0016021: integral component of membrane | 2.34E-03 |
| 33 | GO:0009506: plasmodesma | 2.44E-03 |
| 34 | GO:0009707: chloroplast outer membrane | 3.04E-03 |
| 35 | GO:0005786: signal recognition particle, endoplasmic reticulum targeting | 3.58E-03 |
| 36 | GO:0005763: mitochondrial small ribosomal subunit | 4.05E-03 |
| 37 | GO:0045298: tubulin complex | 4.05E-03 |
| 38 | GO:0005840: ribosome | 4.55E-03 |
| 39 | GO:0005884: actin filament | 5.58E-03 |
| 40 | GO:0009706: chloroplast inner membrane | 9.49E-03 |
| 41 | GO:0042651: thylakoid membrane | 9.80E-03 |
| 42 | GO:0009532: plastid stroma | 1.05E-02 |
| 43 | GO:0005576: extracellular region | 1.55E-02 |
| 44 | GO:0009523: photosystem II | 1.64E-02 |
| 45 | GO:0016020: membrane | 1.66E-02 |
| 46 | GO:0010319: stromule | 2.06E-02 |
| 47 | GO:0009536: plastid | 2.06E-02 |
| 48 | GO:0015934: large ribosomal subunit | 3.00E-02 |
| 49 | GO:0005874: microtubule | 3.06E-02 |
| 50 | GO:0005856: cytoskeleton | 4.17E-02 |