GO Enrichment Analysis of Co-expressed Genes with
AT1G30380
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042425: choline biosynthetic process | 0.00E+00 |
| 2 | GO:0045014: negative regulation of transcription by glucose | 0.00E+00 |
| 3 | GO:0010207: photosystem II assembly | 6.92E-10 |
| 4 | GO:0015979: photosynthesis | 7.91E-10 |
| 5 | GO:0090391: granum assembly | 2.44E-09 |
| 6 | GO:0009735: response to cytokinin | 3.60E-07 |
| 7 | GO:0035304: regulation of protein dephosphorylation | 6.64E-07 |
| 8 | GO:0010206: photosystem II repair | 1.50E-06 |
| 9 | GO:0010205: photoinhibition | 2.06E-06 |
| 10 | GO:0015995: chlorophyll biosynthetic process | 5.08E-06 |
| 11 | GO:0080170: hydrogen peroxide transmembrane transport | 5.94E-06 |
| 12 | GO:0042549: photosystem II stabilization | 2.79E-05 |
| 13 | GO:0034220: ion transmembrane transport | 3.59E-05 |
| 14 | GO:0010196: nonphotochemical quenching | 5.34E-05 |
| 15 | GO:0010027: thylakoid membrane organization | 9.90E-05 |
| 16 | GO:0034337: RNA folding | 1.14E-04 |
| 17 | GO:0019684: photosynthesis, light reaction | 1.82E-04 |
| 18 | GO:0009773: photosynthetic electron transport in photosystem I | 1.82E-04 |
| 19 | GO:0043255: regulation of carbohydrate biosynthetic process | 2.65E-04 |
| 20 | GO:0010541: acropetal auxin transport | 2.65E-04 |
| 21 | GO:0006568: tryptophan metabolic process | 2.65E-04 |
| 22 | GO:0010289: homogalacturonan biosynthetic process | 2.65E-04 |
| 23 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 2.65E-04 |
| 24 | GO:0006833: water transport | 3.44E-04 |
| 25 | GO:0010160: formation of animal organ boundary | 4.38E-04 |
| 26 | GO:0009306: protein secretion | 5.99E-04 |
| 27 | GO:0048443: stamen development | 5.99E-04 |
| 28 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 6.29E-04 |
| 29 | GO:1901332: negative regulation of lateral root development | 6.29E-04 |
| 30 | GO:0051513: regulation of monopolar cell growth | 6.29E-04 |
| 31 | GO:0071484: cellular response to light intensity | 6.29E-04 |
| 32 | GO:0043481: anthocyanin accumulation in tissues in response to UV light | 6.29E-04 |
| 33 | GO:0042335: cuticle development | 6.98E-04 |
| 34 | GO:0030104: water homeostasis | 8.35E-04 |
| 35 | GO:0006656: phosphatidylcholine biosynthetic process | 1.05E-03 |
| 36 | GO:0006655: phosphatidylglycerol biosynthetic process | 1.29E-03 |
| 37 | GO:0060918: auxin transport | 1.29E-03 |
| 38 | GO:0010337: regulation of salicylic acid metabolic process | 1.29E-03 |
| 39 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 1.54E-03 |
| 40 | GO:1901259: chloroplast rRNA processing | 1.54E-03 |
| 41 | GO:1900057: positive regulation of leaf senescence | 1.81E-03 |
| 42 | GO:0048528: post-embryonic root development | 1.81E-03 |
| 43 | GO:0009772: photosynthetic electron transport in photosystem II | 1.81E-03 |
| 44 | GO:0006605: protein targeting | 2.09E-03 |
| 45 | GO:0048564: photosystem I assembly | 2.09E-03 |
| 46 | GO:0048589: developmental growth | 2.70E-03 |
| 47 | GO:0009245: lipid A biosynthetic process | 2.70E-03 |
| 48 | GO:0055085: transmembrane transport | 3.01E-03 |
| 49 | GO:0006535: cysteine biosynthetic process from serine | 3.36E-03 |
| 50 | GO:0006032: chitin catabolic process | 3.36E-03 |
| 51 | GO:0010152: pollen maturation | 4.06E-03 |
| 52 | GO:0008361: regulation of cell size | 4.06E-03 |
| 53 | GO:0016024: CDP-diacylglycerol biosynthetic process | 4.06E-03 |
| 54 | GO:0009718: anthocyanin-containing compound biosynthetic process | 4.43E-03 |
| 55 | GO:0032259: methylation | 4.59E-03 |
| 56 | GO:0010540: basipetal auxin transport | 4.81E-03 |
| 57 | GO:0010053: root epidermal cell differentiation | 5.21E-03 |
| 58 | GO:0009825: multidimensional cell growth | 5.21E-03 |
| 59 | GO:0010167: response to nitrate | 5.21E-03 |
| 60 | GO:0019344: cysteine biosynthetic process | 6.03E-03 |
| 61 | GO:0000027: ribosomal large subunit assembly | 6.03E-03 |
| 62 | GO:0016998: cell wall macromolecule catabolic process | 6.89E-03 |
| 63 | GO:0009733: response to auxin | 7.28E-03 |
| 64 | GO:0009734: auxin-activated signaling pathway | 7.49E-03 |
| 65 | GO:0071369: cellular response to ethylene stimulus | 7.79E-03 |
| 66 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 7.79E-03 |
| 67 | GO:0080022: primary root development | 9.23E-03 |
| 68 | GO:0000413: protein peptidyl-prolyl isomerization | 9.23E-03 |
| 69 | GO:0009958: positive gravitropism | 9.73E-03 |
| 70 | GO:0015986: ATP synthesis coupled proton transport | 1.02E-02 |
| 71 | GO:0010183: pollen tube guidance | 1.08E-02 |
| 72 | GO:0006810: transport | 1.09E-02 |
| 73 | GO:0000302: response to reactive oxygen species | 1.13E-02 |
| 74 | GO:0030163: protein catabolic process | 1.24E-02 |
| 75 | GO:0009639: response to red or far red light | 1.29E-02 |
| 76 | GO:0009828: plant-type cell wall loosening | 1.29E-02 |
| 77 | GO:0009567: double fertilization forming a zygote and endosperm | 1.29E-02 |
| 78 | GO:0009826: unidimensional cell growth | 1.34E-02 |
| 79 | GO:0009658: chloroplast organization | 1.40E-02 |
| 80 | GO:0042254: ribosome biogenesis | 1.42E-02 |
| 81 | GO:0009860: pollen tube growth | 1.51E-02 |
| 82 | GO:0009627: systemic acquired resistance | 1.58E-02 |
| 83 | GO:0080167: response to karrikin | 1.74E-02 |
| 84 | GO:0030244: cellulose biosynthetic process | 1.77E-02 |
| 85 | GO:0010311: lateral root formation | 1.83E-02 |
| 86 | GO:0010218: response to far red light | 1.89E-02 |
| 87 | GO:0048527: lateral root development | 1.96E-02 |
| 88 | GO:0016051: carbohydrate biosynthetic process | 2.09E-02 |
| 89 | GO:0009637: response to blue light | 2.09E-02 |
| 90 | GO:0034599: cellular response to oxidative stress | 2.16E-02 |
| 91 | GO:0009793: embryo development ending in seed dormancy | 2.16E-02 |
| 92 | GO:0030001: metal ion transport | 2.29E-02 |
| 93 | GO:0042742: defense response to bacterium | 2.45E-02 |
| 94 | GO:0009926: auxin polar transport | 2.50E-02 |
| 95 | GO:0009640: photomorphogenesis | 2.50E-02 |
| 96 | GO:0006412: translation | 2.54E-02 |
| 97 | GO:0006855: drug transmembrane transport | 2.79E-02 |
| 98 | GO:0008152: metabolic process | 2.83E-02 |
| 99 | GO:0009664: plant-type cell wall organization | 2.94E-02 |
| 100 | GO:0009809: lignin biosynthetic process | 3.09E-02 |
| 101 | GO:0006508: proteolysis | 3.28E-02 |
| 102 | GO:0009624: response to nematode | 3.98E-02 |
| 103 | GO:0009416: response to light stimulus | 4.53E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046406: magnesium protoporphyrin IX methyltransferase activity | 0.00E+00 |
| 2 | GO:0047513: 1,2-alpha-L-fucosidase activity | 0.00E+00 |
| 3 | GO:0010242: oxygen evolving activity | 0.00E+00 |
| 4 | GO:0016851: magnesium chelatase activity | 5.94E-06 |
| 5 | GO:0019843: rRNA binding | 6.02E-06 |
| 6 | GO:0015250: water channel activity | 9.90E-05 |
| 7 | GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity | 1.14E-04 |
| 8 | GO:0004425: indole-3-glycerol-phosphate synthase activity | 1.14E-04 |
| 9 | GO:0000234: phosphoethanolamine N-methyltransferase activity | 2.65E-04 |
| 10 | GO:0008266: poly(U) RNA binding | 2.74E-04 |
| 11 | GO:0005509: calcium ion binding | 2.76E-04 |
| 12 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 3.52E-04 |
| 13 | GO:0005528: FK506 binding | 3.83E-04 |
| 14 | GO:0004751: ribose-5-phosphate isomerase activity | 4.38E-04 |
| 15 | GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity | 8.35E-04 |
| 16 | GO:0010011: auxin binding | 8.35E-04 |
| 17 | GO:0004252: serine-type endopeptidase activity | 9.96E-04 |
| 18 | GO:0031177: phosphopantetheine binding | 1.29E-03 |
| 19 | GO:0004130: cytochrome-c peroxidase activity | 1.29E-03 |
| 20 | GO:0000035: acyl binding | 1.54E-03 |
| 21 | GO:0004124: cysteine synthase activity | 1.54E-03 |
| 22 | GO:0008236: serine-type peptidase activity | 1.61E-03 |
| 23 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 1.76E-03 |
| 24 | GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process | 2.09E-03 |
| 25 | GO:0004568: chitinase activity | 3.36E-03 |
| 26 | GO:0047372: acylglycerol lipase activity | 3.71E-03 |
| 27 | GO:0031072: heat shock protein binding | 4.43E-03 |
| 28 | GO:0009982: pseudouridine synthase activity | 4.43E-03 |
| 29 | GO:0004565: beta-galactosidase activity | 4.43E-03 |
| 30 | GO:0010329: auxin efflux transmembrane transporter activity | 4.43E-03 |
| 31 | GO:0003735: structural constituent of ribosome | 4.84E-03 |
| 32 | GO:0016787: hydrolase activity | 5.51E-03 |
| 33 | GO:0005515: protein binding | 6.06E-03 |
| 34 | GO:0043424: protein histidine kinase binding | 6.45E-03 |
| 35 | GO:0004707: MAP kinase activity | 6.89E-03 |
| 36 | GO:0016829: lyase activity | 7.06E-03 |
| 37 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 7.34E-03 |
| 38 | GO:0030570: pectate lyase activity | 7.79E-03 |
| 39 | GO:0003756: protein disulfide isomerase activity | 8.26E-03 |
| 40 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 9.73E-03 |
| 41 | GO:0003729: mRNA binding | 1.12E-02 |
| 42 | GO:0008168: methyltransferase activity | 1.34E-02 |
| 43 | GO:0016788: hydrolase activity, acting on ester bonds | 1.42E-02 |
| 44 | GO:0030247: polysaccharide binding | 1.64E-02 |
| 45 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.77E-02 |
| 46 | GO:0005525: GTP binding | 1.89E-02 |
| 47 | GO:0030145: manganese ion binding | 1.96E-02 |
| 48 | GO:0003746: translation elongation factor activity | 2.09E-02 |
| 49 | GO:0031625: ubiquitin protein ligase binding | 3.33E-02 |
| 50 | GO:0004650: polygalacturonase activity | 3.73E-02 |
| 51 | GO:0016887: ATPase activity | 3.96E-02 |
| 52 | GO:0051082: unfolded protein binding | 3.98E-02 |
| 53 | GO:0016746: transferase activity, transferring acyl groups | 4.06E-02 |
| 54 | GO:0003723: RNA binding | 4.93E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009515: granal stacked thylakoid | 0.00E+00 |
| 2 | GO:0043224: nuclear SCF ubiquitin ligase complex | 0.00E+00 |
| 3 | GO:0098572: stromal side of plastid thylakoid membrane | 0.00E+00 |
| 4 | GO:0009507: chloroplast | 3.57E-31 |
| 5 | GO:0009534: chloroplast thylakoid | 9.58E-27 |
| 6 | GO:0009535: chloroplast thylakoid membrane | 7.19E-25 |
| 7 | GO:0009543: chloroplast thylakoid lumen | 5.87E-21 |
| 8 | GO:0009570: chloroplast stroma | 1.13E-20 |
| 9 | GO:0009579: thylakoid | 2.25E-20 |
| 10 | GO:0009941: chloroplast envelope | 7.90E-20 |
| 11 | GO:0031977: thylakoid lumen | 5.92E-16 |
| 12 | GO:0030095: chloroplast photosystem II | 4.29E-12 |
| 13 | GO:0009654: photosystem II oxygen evolving complex | 2.05E-11 |
| 14 | GO:0019898: extrinsic component of membrane | 2.69E-10 |
| 15 | GO:0009533: chloroplast stromal thylakoid | 4.62E-07 |
| 16 | GO:0010007: magnesium chelatase complex | 2.51E-06 |
| 17 | GO:0010287: plastoglobule | 8.77E-05 |
| 18 | GO:0043674: columella | 1.14E-04 |
| 19 | GO:0009508: plastid chromosome | 2.41E-04 |
| 20 | GO:0030093: chloroplast photosystem I | 2.65E-04 |
| 21 | GO:0016020: membrane | 3.80E-04 |
| 22 | GO:0033281: TAT protein transport complex | 4.38E-04 |
| 23 | GO:0009509: chromoplast | 4.38E-04 |
| 24 | GO:0009523: photosystem II | 8.60E-04 |
| 25 | GO:0055035: plastid thylakoid membrane | 1.05E-03 |
| 26 | GO:0009295: nucleoid | 1.17E-03 |
| 27 | GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1) | 1.29E-03 |
| 28 | GO:0005840: ribosome | 1.57E-03 |
| 29 | GO:0042807: central vacuole | 1.81E-03 |
| 30 | GO:0009538: photosystem I reaction center | 2.09E-03 |
| 31 | GO:0008180: COP9 signalosome | 2.70E-03 |
| 32 | GO:0042644: chloroplast nucleoid | 2.70E-03 |
| 33 | GO:0055028: cortical microtubule | 3.36E-03 |
| 34 | GO:0032040: small-subunit processome | 4.06E-03 |
| 35 | GO:0000312: plastid small ribosomal subunit | 4.81E-03 |
| 36 | GO:0005887: integral component of plasma membrane | 7.15E-03 |
| 37 | GO:0010319: stromule | 1.35E-02 |
| 38 | GO:0048046: apoplast | 1.38E-02 |
| 39 | GO:0005618: cell wall | 1.60E-02 |
| 40 | GO:0031969: chloroplast membrane | 1.74E-02 |
| 41 | GO:0019005: SCF ubiquitin ligase complex | 1.77E-02 |
| 42 | GO:0000502: proteasome complex | 3.09E-02 |
| 43 | GO:0009706: chloroplast inner membrane | 3.98E-02 |