co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G30270

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0009312: oligosaccharide biosynthetic process	0.00E+00
2	GO:0010793: regulation of mRNA export from nucleus	0.00E+00
3	GO:0000478: endonucleolytic cleavage involved in rRNA processing	0.00E+00
4	GO:0000188: inactivation of MAPK activity	0.00E+00
5	GO:0009991: response to extracellular stimulus	0.00E+00
6	GO:0007160: cell-matrix adhesion	0.00E+00
7	GO:0006903: vesicle targeting	0.00E+00
8	GO:0010111: glyoxysome organization	0.00E+00
9	GO:0080056: petal vascular tissue pattern formation	0.00E+00
10	GO:2001253: regulation of histone H3-K36 trimethylation	0.00E+00
11	GO:0006987: activation of signaling protein activity involved in unfolded protein response	0.00E+00
12	GO:0080057: sepal vascular tissue pattern formation	0.00E+00
13	GO:0006014: D-ribose metabolic process	5.33E-05
14	GO:0006635: fatty acid beta-oxidation	1.27E-04
15	GO:0016559: peroxisome fission	1.27E-04
16	GO:0030968: endoplasmic reticulum unfolded protein response	1.59E-04
17	GO:0060321: acceptance of pollen	1.59E-04
18	GO:0035494: SNARE complex disassembly	1.69E-04
19	GO:0031338: regulation of vesicle fusion	1.69E-04
20	GO:0098721: uracil import across plasma membrane	1.69E-04
21	GO:0006144: purine nucleobase metabolic process	1.69E-04
22	GO:0098702: adenine import across plasma membrane	1.69E-04
23	GO:0098710: guanine import across plasma membrane	1.69E-04
24	GO:0048482: plant ovule morphogenesis	1.69E-04
25	GO:0019628: urate catabolic process	1.69E-04
26	GO:0006481: C-terminal protein methylation	1.69E-04
27	GO:1902265: abscisic acid homeostasis	1.69E-04
28	GO:0035344: hypoxanthine transport	1.69E-04
29	GO:0008202: steroid metabolic process	2.33E-04
30	GO:0043069: negative regulation of programmed cell death	2.75E-04
31	GO:0000266: mitochondrial fission	3.66E-04
32	GO:0052542: defense response by callose deposition	3.83E-04
33	GO:0051258: protein polymerization	3.83E-04
34	GO:0015012: heparan sulfate proteoglycan biosynthetic process	3.83E-04
35	GO:0019441: tryptophan catabolic process to kynurenine	3.83E-04
36	GO:0019395: fatty acid oxidation	3.83E-04
37	GO:0006024: glycosaminoglycan biosynthetic process	3.83E-04
38	GO:0050684: regulation of mRNA processing	3.83E-04
39	GO:0009727: detection of ethylene stimulus	3.83E-04
40	GO:0010030: positive regulation of seed germination	5.27E-04
41	GO:0032784: regulation of DNA-templated transcription, elongation	6.25E-04
42	GO:0090630: activation of GTPase activity	6.25E-04
43	GO:0046621: negative regulation of organ growth	6.25E-04
44	GO:2000034: regulation of seed maturation	6.25E-04
45	GO:0006612: protein targeting to membrane	8.93E-04
46	GO:0006893: Golgi to plasma membrane transport	8.93E-04
47	GO:0051601: exocyst localization	8.93E-04
48	GO:2001289: lipid X metabolic process	8.93E-04
49	GO:0072334: UDP-galactose transmembrane transport	8.93E-04
50	GO:0019048: modulation by virus of host morphology or physiology	8.93E-04
51	GO:0009399: nitrogen fixation	8.93E-04
52	GO:0071369: cellular response to ethylene stimulus	9.28E-04
53	GO:0006542: glutamine biosynthetic process	1.18E-03
54	GO:0010222: stem vascular tissue pattern formation	1.18E-03
55	GO:0009687: abscisic acid metabolic process	1.18E-03
56	GO:0006370: 7-methylguanosine mRNA capping	1.18E-03
57	GO:0019252: starch biosynthetic process	1.44E-03
58	GO:0006090: pyruvate metabolic process	1.50E-03
59	GO:0010225: response to UV-C	1.50E-03
60	GO:0010337: regulation of salicylic acid metabolic process	1.85E-03
61	GO:0048317: seed morphogenesis	1.85E-03
62	GO:0006904: vesicle docking involved in exocytosis	1.98E-03
63	GO:0006397: mRNA processing	2.15E-03
64	GO:0033962: cytoplasmic mRNA processing body assembly	2.22E-03
65	GO:0048280: vesicle fusion with Golgi apparatus	2.22E-03
66	GO:0019509: L-methionine salvage from methylthioadenosine	2.22E-03
67	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.35E-03
68	GO:0010044: response to aluminum ion	2.61E-03
69	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	2.61E-03
70	GO:0006955: immune response	2.61E-03
71	GO:0008219: cell death	2.89E-03
72	GO:0006875: cellular metal ion homeostasis	3.02E-03
73	GO:0032875: regulation of DNA endoreduplication	3.02E-03
74	GO:0009819: drought recovery	3.02E-03
75	GO:0006468: protein phosphorylation	3.21E-03
76	GO:0009051: pentose-phosphate shunt, oxidative branch	3.91E-03
77	GO:0006887: exocytosis	4.33E-03
78	GO:0048354: mucilage biosynthetic process involved in seed coat development	4.38E-03
79	GO:2000280: regulation of root development	4.38E-03
80	GO:0009738: abscisic acid-activated signaling pathway	4.59E-03
81	GO:0006896: Golgi to vacuole transport	4.87E-03
82	GO:0009299: mRNA transcription	4.87E-03
83	GO:0006970: response to osmotic stress	4.96E-03
84	GO:0072593: reactive oxygen species metabolic process	5.38E-03
85	GO:0030148: sphingolipid biosynthetic process	5.38E-03
86	GO:0009723: response to ethylene	5.43E-03
87	GO:0009846: pollen germination	5.89E-03
88	GO:0045037: protein import into chloroplast stroma	5.91E-03
89	GO:0010105: negative regulation of ethylene-activated signaling pathway	5.91E-03
90	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	6.19E-03
91	GO:0006486: protein glycosylation	6.32E-03
92	GO:0046777: protein autophosphorylation	6.46E-03
93	GO:0006108: malate metabolic process	6.46E-03
94	GO:0010588: cotyledon vascular tissue pattern formation	6.46E-03
95	GO:0055085: transmembrane transport	6.93E-03
96	GO:0006417: regulation of translation	7.00E-03
97	GO:0007034: vacuolar transport	7.02E-03
98	GO:0009887: animal organ morphogenesis	7.02E-03
99	GO:0071732: cellular response to nitric oxide	7.60E-03
100	GO:0007031: peroxisome organization	7.60E-03
101	GO:0042343: indole glucosinolate metabolic process	7.60E-03
102	GO:0048367: shoot system development	7.72E-03
103	GO:0006886: intracellular protein transport	7.76E-03
104	GO:0009695: jasmonic acid biosynthetic process	9.44E-03
105	GO:0006825: copper ion transport	9.44E-03
106	GO:0009742: brassinosteroid mediated signaling pathway	9.55E-03
107	GO:0031408: oxylipin biosynthetic process	1.01E-02
108	GO:0051260: protein homooligomerization	1.01E-02
109	GO:0098542: defense response to other organism	1.01E-02
110	GO:0007005: mitochondrion organization	1.08E-02
111	GO:0008284: positive regulation of cell proliferation	1.28E-02
112	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.28E-02
113	GO:0042147: retrograde transport, endosome to Golgi	1.28E-02
114	GO:0051028: mRNA transport	1.28E-02
115	GO:0009873: ethylene-activated signaling pathway	1.35E-02
116	GO:0010501: RNA secondary structure unwinding	1.36E-02
117	GO:0042631: cellular response to water deprivation	1.36E-02
118	GO:0010305: leaf vascular tissue pattern formation	1.43E-02
119	GO:0071472: cellular response to salt stress	1.43E-02
120	GO:0010154: fruit development	1.43E-02
121	GO:0061025: membrane fusion	1.51E-02
122	GO:0006623: protein targeting to vacuole	1.58E-02
123	GO:0006891: intra-Golgi vesicle-mediated transport	1.66E-02
124	GO:0002229: defense response to oomycetes	1.66E-02
125	GO:0016032: viral process	1.74E-02
126	GO:0009630: gravitropism	1.74E-02
127	GO:0006470: protein dephosphorylation	1.79E-02
128	GO:0007166: cell surface receptor signaling pathway	1.79E-02
129	GO:0016310: phosphorylation	1.81E-02
130	GO:0071281: cellular response to iron ion	1.82E-02
131	GO:0008380: RNA splicing	1.86E-02
132	GO:0006914: autophagy	1.90E-02
133	GO:0001666: response to hypoxia	2.16E-02
134	GO:0055114: oxidation-reduction process	2.23E-02
135	GO:0009816: defense response to bacterium, incompatible interaction	2.24E-02
136	GO:0042128: nitrate assimilation	2.33E-02
137	GO:0006888: ER to Golgi vesicle-mediated transport	2.42E-02
138	GO:0016049: cell growth	2.51E-02
139	GO:0009860: pollen tube growth	2.61E-02
140	GO:0009817: defense response to fungus, incompatible interaction	2.61E-02
141	GO:0048527: lateral root development	2.89E-02
142	GO:0010119: regulation of stomatal movement	2.89E-02
143	GO:0045087: innate immune response	3.08E-02
144	GO:0016051: carbohydrate biosynthetic process	3.08E-02
145	GO:0009867: jasmonic acid mediated signaling pathway	3.08E-02
146	GO:0016192: vesicle-mediated transport	3.16E-02
147	GO:0006099: tricarboxylic acid cycle	3.18E-02
148	GO:0044550: secondary metabolite biosynthetic process	3.26E-02
149	GO:0006897: endocytosis	3.49E-02
150	GO:0006869: lipid transport	3.93E-02
151	GO:0031347: regulation of defense response	4.23E-02
152	GO:0006364: rRNA processing	4.57E-02
153	GO:0048364: root development	4.60E-02
154	GO:0010224: response to UV-B	4.68E-02

Rank	GO Term	Adjusted P value
1	GO:0004846: urate oxidase activity	0.00E+00
2	GO:0017017: MAP kinase tyrosine/serine/threonine phosphatase activity	0.00E+00
3	GO:0046522: S-methyl-5-thioribose kinase activity	0.00E+00
4	GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity	0.00E+00
5	GO:0005524: ATP binding	3.99E-05
6	GO:0004747: ribokinase activity	7.42E-05
7	GO:0008865: fructokinase activity	1.27E-04
8	GO:0008142: oxysterol binding	1.59E-04
9	GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity	1.69E-04
10	GO:0000386: second spliceosomal transesterification activity	1.69E-04
11	GO:0015207: adenine transmembrane transporter activity	1.69E-04
12	GO:0004671: protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity	1.69E-04
13	GO:0015208: guanine transmembrane transporter activity	1.69E-04
14	GO:0015294: solute:cation symporter activity	1.69E-04
15	GO:0045140: inositol phosphoceramide synthase activity	3.83E-04
16	GO:0004061: arylformamidase activity	3.83E-04
17	GO:0004484: mRNA guanylyltransferase activity	3.83E-04
18	GO:0003988: acetyl-CoA C-acyltransferase activity	3.83E-04
19	GO:0004383: guanylate cyclase activity	6.25E-04
20	GO:0004473: malate dehydrogenase (decarboxylating) (NADP+) activity	6.25E-04
21	GO:0005483: soluble NSF attachment protein activity	6.25E-04
22	GO:0019829: cation-transporting ATPase activity	6.25E-04
23	GO:0043130: ubiquitin binding	6.49E-04
24	GO:0004108: citrate (Si)-synthase activity	8.93E-04
25	GO:0004300: enoyl-CoA hydratase activity	8.93E-04
26	GO:0001653: peptide receptor activity	8.93E-04
27	GO:0004674: protein serine/threonine kinase activity	1.01E-03
28	GO:0004470: malic enzyme activity	1.18E-03
29	GO:0016652: oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor	1.18E-03
30	GO:0019905: syntaxin binding	1.18E-03
31	GO:0004471: malate dehydrogenase (decarboxylating) (NAD+) activity	1.18E-03
32	GO:0015210: uracil transmembrane transporter activity	1.18E-03
33	GO:0017137: Rab GTPase binding	1.50E-03
34	GO:0004040: amidase activity	1.50E-03
35	GO:0004356: glutamate-ammonia ligase activity	1.50E-03
36	GO:0010294: abscisic acid glucosyltransferase activity	1.50E-03
37	GO:0005459: UDP-galactose transmembrane transporter activity	1.50E-03
38	GO:0008948: oxaloacetate decarboxylase activity	1.50E-03
39	GO:0016301: kinase activity	1.72E-03
40	GO:0008420: CTD phosphatase activity	1.85E-03
41	GO:0004714: transmembrane receptor protein tyrosine kinase activity	3.02E-03
42	GO:0005375: copper ion transmembrane transporter activity	3.46E-03
43	GO:0005515: protein binding	3.90E-03
44	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	3.91E-03
45	GO:0008417: fucosyltransferase activity	3.91E-03
46	GO:0071949: FAD binding	3.91E-03
47	GO:0000149: SNARE binding	3.98E-03
48	GO:0004713: protein tyrosine kinase activity	4.87E-03
49	GO:0004177: aminopeptidase activity	5.38E-03
50	GO:0004521: endoribonuclease activity	5.91E-03
51	GO:0004022: alcohol dehydrogenase (NAD) activity	6.46E-03
52	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	6.46E-03
53	GO:0004672: protein kinase activity	7.47E-03
54	GO:0003729: mRNA binding	7.64E-03
55	GO:0004725: protein tyrosine phosphatase activity	8.20E-03
56	GO:0022857: transmembrane transporter activity	8.47E-03
57	GO:0043424: protein histidine kinase binding	9.44E-03
58	GO:0004176: ATP-dependent peptidase activity	1.01E-02
59	GO:0033612: receptor serine/threonine kinase binding	1.01E-02
60	GO:0003727: single-stranded RNA binding	1.21E-02
61	GO:0001085: RNA polymerase II transcription factor binding	1.43E-02
62	GO:0008289: lipid binding	1.48E-02
63	GO:0010181: FMN binding	1.51E-02
64	GO:0004872: receptor activity	1.58E-02
65	GO:0016887: ATPase activity	1.70E-02
66	GO:0016791: phosphatase activity	1.90E-02
67	GO:0008237: metallopeptidase activity	1.99E-02
68	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	1.99E-02
69	GO:0016597: amino acid binding	2.07E-02
70	GO:0051213: dioxygenase activity	2.16E-02
71	GO:0008375: acetylglucosaminyltransferase activity	2.33E-02
72	GO:0009931: calcium-dependent protein serine/threonine kinase activity	2.33E-02
73	GO:0004721: phosphoprotein phosphatase activity	2.42E-02
74	GO:0004004: ATP-dependent RNA helicase activity	2.42E-02
75	GO:0004683: calmodulin-dependent protein kinase activity	2.42E-02
76	GO:0008236: serine-type peptidase activity	2.51E-02
77	GO:0005096: GTPase activator activity	2.70E-02
78	GO:0004222: metalloendopeptidase activity	2.79E-02
79	GO:0030145: manganese ion binding	2.89E-02
80	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	2.89E-02
81	GO:0008233: peptidase activity	2.95E-02
82	GO:0004497: monooxygenase activity	3.00E-02
83	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	3.08E-02
84	GO:0019825: oxygen binding	3.13E-02
85	GO:0004712: protein serine/threonine/tyrosine kinase activity	3.28E-02
86	GO:0005484: SNAP receptor activity	3.69E-02
87	GO:0004871: signal transducer activity	3.76E-02
88	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	3.87E-02
89	GO:0035091: phosphatidylinositol binding	3.91E-02
90	GO:0051287: NAD binding	4.23E-02
91	GO:0005509: calcium ion binding	4.37E-02
92	GO:0005506: iron ion binding	4.73E-02
93	GO:0008234: cysteine-type peptidase activity	4.91E-02

Rank	GO Term	Adjusted P value
1	GO:0008305: integrin complex	0.00E+00
2	GO:0005886: plasma membrane	7.82E-05
3	GO:0000145: exocyst	1.40E-04
4	GO:0005778: peroxisomal membrane	1.82E-04
5	GO:0016021: integral component of membrane	2.84E-04
6	GO:0005783: endoplasmic reticulum	3.06E-04
7	GO:0005777: peroxisome	3.18E-04
8	GO:0042406: extrinsic component of endoplasmic reticulum membrane	6.25E-04
9	GO:0005741: mitochondrial outer membrane	7.83E-04
10	GO:0005794: Golgi apparatus	8.71E-04
11	GO:0005829: cytosol	1.13E-03
12	GO:0030140: trans-Golgi network transport vesicle	1.85E-03
13	GO:0000815: ESCRT III complex	2.22E-03
14	GO:0030173: integral component of Golgi membrane	2.22E-03
15	GO:0005802: trans-Golgi network	2.53E-03
16	GO:0012507: ER to Golgi transport vesicle membrane	3.02E-03
17	GO:0030131: clathrin adaptor complex	3.02E-03
18	GO:0005768: endosome	3.17E-03
19	GO:0000325: plant-type vacuole	3.33E-03
20	GO:0009514: glyoxysome	3.46E-03
21	GO:0005774: vacuolar membrane	3.88E-03
22	GO:0010494: cytoplasmic stress granule	3.91E-03
23	GO:0031902: late endosome membrane	4.33E-03
24	GO:0031201: SNARE complex	4.33E-03
25	GO:0016604: nuclear body	4.38E-03
26	GO:0030125: clathrin vesicle coat	4.87E-03
27	GO:0005856: cytoskeleton	5.27E-03
28	GO:0030176: integral component of endoplasmic reticulum membrane	7.60E-03
29	GO:0005795: Golgi stack	7.60E-03
30	GO:0043234: protein complex	8.20E-03
31	GO:0005773: vacuole	9.71E-03
32	GO:0005905: clathrin-coated pit	1.01E-02
33	GO:0000775: chromosome, centromeric region	1.08E-02
34	GO:0009524: phragmoplast	1.19E-02
35	GO:0009506: plasmodesma	1.24E-02
36	GO:0005770: late endosome	1.43E-02
37	GO:0005694: chromosome	1.74E-02
38	GO:0032580: Golgi cisterna membrane	1.90E-02
39	GO:0000932: P-body	2.16E-02
40	GO:0005667: transcription factor complex	2.33E-02
41	GO:0005789: endoplasmic reticulum membrane	2.64E-02
42	GO:0016020: membrane	2.71E-02
43	GO:0005618: cell wall	4.03E-02