co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G29860

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010055: atrichoblast differentiation	0.00E+00
2	GO:0043620: regulation of DNA-templated transcription in response to stress	0.00E+00
3	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	4.98E-05
4	GO:0032491: detection of molecule of fungal origin	1.31E-04
5	GO:0032107: regulation of response to nutrient levels	1.31E-04
6	GO:0051938: L-glutamate import	1.31E-04
7	GO:0010726: positive regulation of hydrogen peroxide metabolic process	1.31E-04
8	GO:0010421: hydrogen peroxide-mediated programmed cell death	1.31E-04
9	GO:0009407: toxin catabolic process	2.20E-04
10	GO:0010150: leaf senescence	2.38E-04
11	GO:0042325: regulation of phosphorylation	3.03E-04
12	GO:0043091: L-arginine import	3.03E-04
13	GO:0009838: abscission	3.03E-04
14	GO:0015802: basic amino acid transport	3.03E-04
15	GO:0009805: coumarin biosynthetic process	3.03E-04
16	GO:0002240: response to molecule of oomycetes origin	3.03E-04
17	GO:0009617: response to bacterium	3.17E-04
18	GO:0009636: response to toxic substance	4.33E-04
19	GO:0006874: cellular calcium ion homeostasis	5.12E-04
20	GO:0010227: floral organ abscission	6.66E-04
21	GO:0070301: cellular response to hydrogen peroxide	7.14E-04
22	GO:0009620: response to fungus	7.57E-04
23	GO:1901002: positive regulation of response to salt stress	9.47E-04
24	GO:0045227: capsule polysaccharide biosynthetic process	9.47E-04
25	GO:0006536: glutamate metabolic process	9.47E-04
26	GO:0033358: UDP-L-arabinose biosynthetic process	9.47E-04
27	GO:0002238: response to molecule of fungal origin	1.47E-03
28	GO:0006561: proline biosynthetic process	1.47E-03
29	GO:0010942: positive regulation of cell death	1.47E-03
30	GO:0051607: defense response to virus	1.49E-03
31	GO:0008219: cell death	2.05E-03
32	GO:0009817: defense response to fungus, incompatible interaction	2.05E-03
33	GO:1900057: positive regulation of leaf senescence	2.06E-03
34	GO:0000122: negative regulation of transcription from RNA polymerase II promoter	2.06E-03
35	GO:1900056: negative regulation of leaf senescence	2.06E-03
36	GO:0050829: defense response to Gram-negative bacterium	2.06E-03
37	GO:0007165: signal transduction	2.12E-03
38	GO:0009642: response to light intensity	2.39E-03
39	GO:0010120: camalexin biosynthetic process	2.73E-03
40	GO:0010204: defense response signaling pathway, resistance gene-independent	2.73E-03
41	GO:0009699: phenylpropanoid biosynthetic process	2.73E-03
42	GO:0009056: catabolic process	3.08E-03
43	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	3.46E-03
44	GO:0006032: chitin catabolic process	3.84E-03
45	GO:0009688: abscisic acid biosynthetic process	3.84E-03
46	GO:0010162: seed dormancy process	3.84E-03
47	GO:0010200: response to chitin	3.97E-03
48	GO:0009089: lysine biosynthetic process via diaminopimelate	4.24E-03
49	GO:0009073: aromatic amino acid family biosynthetic process	4.24E-03
50	GO:0000272: polysaccharide catabolic process	4.24E-03
51	GO:0009682: induced systemic resistance	4.24E-03
52	GO:0006790: sulfur compound metabolic process	4.65E-03
53	GO:0006952: defense response	4.99E-03
54	GO:0055046: microgametogenesis	5.08E-03
55	GO:0009718: anthocyanin-containing compound biosynthetic process	5.08E-03
56	GO:0010102: lateral root morphogenesis	5.08E-03
57	GO:0002237: response to molecule of bacterial origin	5.52E-03
58	GO:0046854: phosphatidylinositol phosphorylation	5.97E-03
59	GO:0009225: nucleotide-sugar metabolic process	5.97E-03
60	GO:0005992: trehalose biosynthetic process	6.91E-03
61	GO:0030150: protein import into mitochondrial matrix	6.91E-03
62	GO:0003333: amino acid transmembrane transport	7.91E-03
63	GO:0016998: cell wall macromolecule catabolic process	7.91E-03
64	GO:0042742: defense response to bacterium	8.26E-03
65	GO:0071456: cellular response to hypoxia	8.42E-03
66	GO:0019748: secondary metabolic process	8.42E-03
67	GO:0006012: galactose metabolic process	8.95E-03
68	GO:0009561: megagametogenesis	9.49E-03
69	GO:0006468: protein phosphorylation	1.02E-02
70	GO:0042631: cellular response to water deprivation	1.06E-02
71	GO:0045490: pectin catabolic process	1.10E-02
72	GO:0006885: regulation of pH	1.12E-02
73	GO:0006520: cellular amino acid metabolic process	1.12E-02
74	GO:0042752: regulation of circadian rhythm	1.18E-02
75	GO:0006623: protein targeting to vacuole	1.24E-02
76	GO:0007166: cell surface receptor signaling pathway	1.26E-02
77	GO:0002229: defense response to oomycetes	1.30E-02
78	GO:0010193: response to ozone	1.30E-02
79	GO:0010252: auxin homeostasis	1.49E-02
80	GO:0046686: response to cadmium ion	1.61E-02
81	GO:0009615: response to virus	1.68E-02
82	GO:0009607: response to biotic stimulus	1.75E-02
83	GO:0009723: response to ethylene	1.97E-02
84	GO:0048527: lateral root development	2.25E-02
85	GO:0045087: innate immune response	2.41E-02
86	GO:0006839: mitochondrial transport	2.64E-02
87	GO:0042542: response to hydrogen peroxide	2.80E-02
88	GO:0051707: response to other organism	2.88E-02
89	GO:0016310: phosphorylation	3.16E-02
90	GO:0006979: response to oxidative stress	3.17E-02
91	GO:0006855: drug transmembrane transport	3.22E-02
92	GO:0006812: cation transport	3.39E-02
93	GO:0009664: plant-type cell wall organization	3.39E-02
94	GO:0042538: hyperosmotic salinity response	3.39E-02
95	GO:0006813: potassium ion transport	3.56E-02
96	GO:0050832: defense response to fungus	4.16E-02
97	GO:0015031: protein transport	4.22E-02
98	GO:0042545: cell wall modification	4.48E-02

Rank	GO Term	Adjusted P value
1	GO:0003796: lysozyme activity	0.00E+00
2	GO:0010285: L,L-diaminopimelate aminotransferase activity	1.31E-04
3	GO:0016301: kinase activity	1.94E-04
4	GO:0003849: 3-deoxy-7-phosphoheptulonate synthase activity	3.03E-04
5	GO:0004364: glutathione transferase activity	3.53E-04
6	GO:0004970: ionotropic glutamate receptor activity	3.75E-04
7	GO:0005217: intracellular ligand-gated ion channel activity	3.75E-04
8	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	4.99E-04
9	GO:0045735: nutrient reservoir activity	6.73E-04
10	GO:0004351: glutamate decarboxylase activity	7.14E-04
11	GO:0015189: L-lysine transmembrane transporter activity	7.14E-04
12	GO:0015181: arginine transmembrane transporter activity	7.14E-04
13	GO:0010279: indole-3-acetic acid amido synthetase activity	9.47E-04
14	GO:0050373: UDP-arabinose 4-epimerase activity	9.47E-04
15	GO:0005313: L-glutamate transmembrane transporter activity	9.47E-04
16	GO:0045549: 9-cis-epoxycarotenoid dioxygenase activity	1.20E-03
17	GO:0030170: pyridoxal phosphate binding	1.27E-03
18	GO:0008483: transaminase activity	1.41E-03
19	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	1.76E-03
20	GO:0003978: UDP-glucose 4-epimerase activity	1.76E-03
21	GO:0005085: guanyl-nucleotide exchange factor activity	2.06E-03
22	GO:0030145: manganese ion binding	2.37E-03
23	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	2.37E-03
24	GO:0015174: basic amino acid transmembrane transporter activity	3.46E-03
25	GO:0004568: chitinase activity	3.84E-03
26	GO:0019888: protein phosphatase regulator activity	5.08E-03
27	GO:0015114: phosphate ion transmembrane transporter activity	5.08E-03
28	GO:0015266: protein channel activity	5.08E-03
29	GO:0001046: core promoter sequence-specific DNA binding	6.91E-03
30	GO:0005102: receptor binding	1.00E-02
31	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.02E-02
32	GO:0005451: monovalent cation:proton antiporter activity	1.06E-02
33	GO:0005199: structural constituent of cell wall	1.12E-02
34	GO:0015299: solute:proton antiporter activity	1.18E-02
35	GO:0019901: protein kinase binding	1.24E-02
36	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	1.40E-02
37	GO:0015385: sodium:proton antiporter activity	1.42E-02
38	GO:0051213: dioxygenase activity	1.68E-02
39	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	1.96E-02
40	GO:0050660: flavin adenine dinucleotide binding	1.97E-02
41	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	2.03E-02
42	GO:0015238: drug transmembrane transporter activity	2.11E-02
43	GO:0005516: calmodulin binding	2.17E-02
44	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	2.41E-02
45	GO:0008422: beta-glucosidase activity	2.56E-02
46	GO:0004674: protein serine/threonine kinase activity	3.23E-02
47	GO:0009055: electron carrier activity	3.35E-02
48	GO:0008234: cysteine-type peptidase activity	3.83E-02
49	GO:0015171: amino acid transmembrane transporter activity	3.83E-02
50	GO:0045330: aspartyl esterase activity	3.83E-02
51	GO:0004650: polygalacturonase activity	4.29E-02
52	GO:0080043: quercetin 3-O-glucosyltransferase activity	4.29E-02
53	GO:0080044: quercetin 7-O-glucosyltransferase activity	4.29E-02
54	GO:0030599: pectinesterase activity	4.39E-02

Rank	GO Term	Adjusted P value
1	GO:0016021: integral component of membrane	4.86E-04
2	GO:0009530: primary cell wall	4.99E-04
3	GO:0005886: plasma membrane	5.19E-04
4	GO:0005770: late endosome	9.05E-04
5	GO:0032588: trans-Golgi network membrane	1.47E-03
6	GO:0031305: integral component of mitochondrial inner membrane	2.39E-03
7	GO:0005744: mitochondrial inner membrane presequence translocase complex	9.49E-03
8	GO:0005615: extracellular space	1.23E-02
9	GO:0071944: cell periphery	1.42E-02
10	GO:0032580: Golgi cisterna membrane	1.49E-02
11	GO:0000325: plant-type vacuole	2.25E-02
12	GO:0043231: intracellular membrane-bounded organelle	3.44E-02