co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G28670

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0009264: deoxyribonucleotide catabolic process	0.00E+00
2	GO:0080167: response to karrikin	5.46E-06
3	GO:0051555: flavonol biosynthetic process	9.27E-06
4	GO:0010224: response to UV-B	1.27E-05
5	GO:0048438: floral whorl development	1.77E-05
6	GO:0031539: positive regulation of anthocyanin metabolic process	1.77E-05
7	GO:0009411: response to UV	4.31E-05
8	GO:0019388: galactose catabolic process	4.61E-05
9	GO:0007154: cell communication	4.61E-05
10	GO:0010220: positive regulation of vernalization response	4.61E-05
11	GO:1900386: positive regulation of flavonol biosynthetic process	4.61E-05
12	GO:0046417: chorismate metabolic process	8.18E-05
13	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	8.18E-05
14	GO:0009590: detection of gravity	1.23E-04
15	GO:0009963: positive regulation of flavonoid biosynthetic process	1.23E-04
16	GO:0030154: cell differentiation	1.62E-04
17	GO:0009813: flavonoid biosynthetic process	1.69E-04
18	GO:0006796: phosphate-containing compound metabolic process	2.72E-04
19	GO:0010304: PSII associated light-harvesting complex II catabolic process	2.72E-04
20	GO:0000060: protein import into nucleus, translocation	2.72E-04
21	GO:0010076: maintenance of floral meristem identity	3.27E-04
22	GO:0010555: response to mannitol	3.27E-04
23	GO:0010077: maintenance of inflorescence meristem identity	3.27E-04
24	GO:2000067: regulation of root morphogenesis	3.27E-04
25	GO:0098869: cellular oxidant detoxification	3.84E-04
26	GO:0005978: glycogen biosynthetic process	4.43E-04
27	GO:0009787: regulation of abscisic acid-activated signaling pathway	4.43E-04
28	GO:0010099: regulation of photomorphogenesis	5.05E-04
29	GO:0007186: G-protein coupled receptor signaling pathway	5.05E-04
30	GO:0009073: aromatic amino acid family biosynthetic process	7.68E-04
31	GO:0009750: response to fructose	7.68E-04
32	GO:0048229: gametophyte development	7.68E-04
33	GO:0009698: phenylpropanoid metabolic process	7.68E-04
34	GO:0010582: floral meristem determinacy	8.38E-04
35	GO:0006006: glucose metabolic process	9.08E-04
36	GO:0048768: root hair cell tip growth	9.82E-04
37	GO:0042753: positive regulation of circadian rhythm	1.13E-03
38	GO:0010017: red or far-red light signaling pathway	1.46E-03
39	GO:0010584: pollen exine formation	1.63E-03
40	GO:0009958: positive gravitropism	1.90E-03
41	GO:0009749: response to glucose	2.09E-03
42	GO:0019252: starch biosynthetic process	2.09E-03
43	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	2.19E-03
44	GO:0016125: sterol metabolic process	2.49E-03
45	GO:0009911: positive regulation of flower development	2.80E-03
46	GO:0048573: photoperiodism, flowering	3.13E-03
47	GO:0010218: response to far red light	3.59E-03
48	GO:0010119: regulation of stomatal movement	3.70E-03
49	GO:0006631: fatty acid metabolic process	4.43E-03
50	GO:0010114: response to red light	4.68E-03
51	GO:0009744: response to sucrose	4.68E-03
52	GO:0009640: photomorphogenesis	4.68E-03
53	GO:0045893: positive regulation of transcription, DNA-templated	4.71E-03
54	GO:0000165: MAPK cascade	5.34E-03
55	GO:0031347: regulation of defense response	5.34E-03
56	GO:0009809: lignin biosynthetic process	5.75E-03
57	GO:0009585: red, far-red light phototransduction	5.75E-03
58	GO:0009909: regulation of flower development	6.17E-03
59	GO:0009740: gibberellic acid mediated signaling pathway	7.04E-03
60	GO:0009739: response to gibberellin	1.16E-02
61	GO:0005975: carbohydrate metabolic process	1.26E-02
62	GO:0045944: positive regulation of transcription from RNA polymerase II promoter	1.39E-02
63	GO:0009860: pollen tube growth	1.54E-02
64	GO:0009737: response to abscisic acid	1.78E-02
65	GO:0045454: cell redox homeostasis	1.94E-02
66	GO:0006629: lipid metabolic process	2.25E-02
67	GO:0009408: response to heat	2.25E-02
68	GO:0008152: metabolic process	2.41E-02
69	GO:0055114: oxidation-reduction process	2.66E-02
70	GO:0006357: regulation of transcription from RNA polymerase II promoter	2.75E-02
71	GO:0009908: flower development	3.15E-02
72	GO:0009416: response to light stimulus	3.39E-02
73	GO:0009611: response to wounding	3.44E-02
74	GO:0051301: cell division	3.60E-02

Rank	GO Term	Adjusted P value
1	GO:0047230: flavonol-3-O-glucoside L-rhamnosyltransferase activity	0.00E+00
2	GO:0045430: chalcone isomerase activity	4.80E-07
3	GO:0004106: chorismate mutase activity	4.61E-05
4	GO:0004614: phosphoglucomutase activity	4.61E-05
5	GO:0016868: intramolecular transferase activity, phosphotransferases	4.61E-05
6	GO:0001664: G-protein coupled receptor binding	8.18E-05
7	GO:0008253: 5'-nucleotidase activity	8.18E-05
8	GO:0031683: G-protein beta/gamma-subunit complex binding	8.18E-05
9	GO:0016462: pyrophosphatase activity	2.72E-04
10	GO:0016688: L-ascorbate peroxidase activity	2.72E-04
11	GO:0008429: phosphatidylethanolamine binding	2.72E-04
12	GO:0004427: inorganic diphosphatase activity	3.84E-04
13	GO:0016621: cinnamoyl-CoA reductase activity	3.84E-04
14	GO:0016207: 4-coumarate-CoA ligase activity	5.68E-04
15	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	7.16E-04
16	GO:0008081: phosphoric diester hydrolase activity	9.08E-04
17	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	9.82E-04
18	GO:0000287: magnesium ion binding	1.28E-03
19	GO:0004176: ATP-dependent peptidase activity	1.37E-03
20	GO:0043565: sequence-specific DNA binding	1.79E-03
21	GO:0008237: metallopeptidase activity	2.60E-03
22	GO:0030247: polysaccharide binding	3.13E-03
23	GO:0004222: metalloendopeptidase activity	3.59E-03
24	GO:0003690: double-stranded DNA binding	5.89E-03
25	GO:0080043: quercetin 3-O-glucosyltransferase activity	6.89E-03
26	GO:0080044: quercetin 7-O-glucosyltransferase activity	6.89E-03
27	GO:0016874: ligase activity	7.04E-03
28	GO:0003779: actin binding	7.19E-03
29	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	8.74E-03
30	GO:0008194: UDP-glycosyltransferase activity	1.16E-02
31	GO:0020037: heme binding	1.31E-02
32	GO:0046982: protein heterodimerization activity	1.44E-02
33	GO:0004497: monooxygenase activity	1.70E-02
34	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	1.94E-02
35	GO:0042803: protein homodimerization activity	2.00E-02
36	GO:0004871: signal transducer activity	2.00E-02
37	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	2.09E-02
38	GO:0003924: GTPase activity	2.25E-02
39	GO:0016887: ATPase activity	3.07E-02
40	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	4.13E-02
41	GO:0005525: GTP binding	4.83E-02

Rank	GO Term	Adjusted P value
1	GO:0042406: extrinsic component of endoplasmic reticulum membrane	8.18E-05
2	GO:0010319: stromule	2.60E-03
3	GO:0005783: endoplasmic reticulum	2.87E-03
4	GO:0031966: mitochondrial membrane	5.48E-03
5	GO:0005834: heterotrimeric G-protein complex	6.74E-03
6	GO:0005623: cell	8.74E-03
7	GO:0009536: plastid	1.02E-02
8	GO:0009705: plant-type vacuole membrane	1.08E-02
9	GO:0046658: anchored component of plasma membrane	1.31E-02
10	GO:0005743: mitochondrial inner membrane	2.14E-02
11	GO:0043231: intracellular membrane-bounded organelle	2.41E-02
12	GO:0005886: plasma membrane	2.65E-02
13	GO:0005774: vacuolar membrane	2.89E-02
14	GO:0009506: plasmodesma	3.01E-02
15	GO:0009579: thylakoid	3.85E-02
16	GO:0009941: chloroplast envelope	3.92E-02
17	GO:0005634: nucleus	3.97E-02
18	GO:0009507: chloroplast	4.12E-02
19	GO:0005773: vacuole	4.42E-02
20	GO:0031225: anchored component of membrane	4.65E-02