co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G28610

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0018023: peptidyl-lysine trimethylation	0.00E+00
2	GO:0010028: xanthophyll cycle	2.08E-05
3	GO:0006824: cobalt ion transport	2.08E-05
4	GO:0018026: peptidyl-lysine monomethylation	5.37E-05
5	GO:0016122: xanthophyll metabolic process	5.37E-05
6	GO:0034755: iron ion transmembrane transport	5.37E-05
7	GO:0051639: actin filament network formation	1.42E-04
8	GO:0042938: dipeptide transport	1.95E-04
9	GO:0051764: actin crosslink formation	1.95E-04
10	GO:0015994: chlorophyll metabolic process	1.95E-04
11	GO:0006629: lipid metabolic process	2.99E-04
12	GO:1901371: regulation of leaf morphogenesis	3.11E-04
13	GO:0006655: phosphatidylglycerol biosynthetic process	3.11E-04
14	GO:0080186: developmental vegetative growth	4.37E-04
15	GO:0005978: glycogen biosynthetic process	5.05E-04
16	GO:0010206: photosystem II repair	6.45E-04
17	GO:0015706: nitrate transport	9.50E-04
18	GO:0016024: CDP-diacylglycerol biosynthetic process	9.50E-04
19	GO:0010628: positive regulation of gene expression	1.03E-03
20	GO:0006094: gluconeogenesis	1.03E-03
21	GO:0009887: animal organ morphogenesis	1.11E-03
22	GO:0051017: actin filament bundle assembly	1.38E-03
23	GO:0009686: gibberellin biosynthetic process	1.76E-03
24	GO:0010268: brassinosteroid homeostasis	2.17E-03
25	GO:0019252: starch biosynthetic process	2.39E-03
26	GO:0008654: phospholipid biosynthetic process	2.39E-03
27	GO:0016132: brassinosteroid biosynthetic process	2.50E-03
28	GO:0009567: double fertilization forming a zygote and endosperm	2.85E-03
29	GO:0016125: sterol metabolic process	2.85E-03
30	GO:0016311: dephosphorylation	3.71E-03
31	GO:0007568: aging	4.24E-03
32	GO:0006631: fatty acid metabolic process	5.07E-03
33	GO:0009640: photomorphogenesis	5.37E-03
34	GO:0006364: rRNA processing	6.59E-03
35	GO:0006486: protein glycosylation	6.59E-03
36	GO:0006857: oligopeptide transport	6.91E-03
37	GO:0006096: glycolytic process	7.40E-03
38	GO:0007623: circadian rhythm	1.24E-02
39	GO:0010228: vegetative to reproductive phase transition of meristem	1.28E-02
40	GO:0007166: cell surface receptor signaling pathway	1.36E-02
41	GO:0042254: ribosome biogenesis	1.71E-02
42	GO:0048366: leaf development	1.89E-02
43	GO:0007275: multicellular organism development	2.00E-02
44	GO:0044550: secondary metabolite biosynthetic process	2.08E-02
45	GO:0009408: response to heat	2.59E-02
46	GO:0008152: metabolic process	2.78E-02
47	GO:0009873: ethylene-activated signaling pathway	3.11E-02
48	GO:0006351: transcription, DNA-templated	3.11E-02
49	GO:0009908: flower development	3.63E-02

Rank	GO Term	Adjusted P value
1	GO:0090711: FMN hydrolase activity	0.00E+00
2	GO:0046422: violaxanthin de-epoxidase activity	0.00E+00
3	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	2.08E-05
4	GO:0051777: ent-kaurenoate oxidase activity	2.08E-05
5	GO:0008963: phospho-N-acetylmuramoyl-pentapeptide-transferase activity	5.37E-05
6	GO:0016868: intramolecular transferase activity, phosphotransferases	5.37E-05
7	GO:0019201: nucleotide kinase activity	1.42E-04
8	GO:0008878: glucose-1-phosphate adenylyltransferase activity	1.95E-04
9	GO:0016279: protein-lysine N-methyltransferase activity	1.95E-04
10	GO:0042936: dipeptide transporter activity	1.95E-04
11	GO:0004605: phosphatidate cytidylyltransferase activity	3.11E-04
12	GO:0004332: fructose-bisphosphate aldolase activity	3.11E-04
13	GO:0004017: adenylate kinase activity	3.73E-04
14	GO:0005381: iron ion transmembrane transporter activity	7.18E-04
15	GO:0047372: acylglycerol lipase activity	8.71E-04
16	GO:0008081: phosphoric diester hydrolase activity	1.03E-03
17	GO:0003824: catalytic activity	1.67E-03
18	GO:0019901: protein kinase binding	2.39E-03
19	GO:0051015: actin filament binding	2.73E-03
20	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	3.84E-03
21	GO:0003993: acid phosphatase activity	4.65E-03
22	GO:0043621: protein self-association	5.66E-03
23	GO:0003779: actin binding	8.25E-03
24	GO:0005506: iron ion binding	9.99E-03
25	GO:0016829: lyase activity	1.04E-02
26	GO:0005215: transporter activity	1.12E-02
27	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.18E-02
28	GO:0020037: heme binding	1.61E-02
29	GO:0046982: protein heterodimerization activity	1.66E-02
30	GO:0016787: hydrolase activity	2.18E-02
31	GO:0004871: signal transducer activity	2.31E-02
32	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	2.36E-02
33	GO:0004519: endonuclease activity	2.75E-02
34	GO:0003700: transcription factor activity, sequence-specific DNA binding	2.98E-02
35	GO:0003677: DNA binding	3.86E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	2.78E-06
2	GO:0009534: chloroplast thylakoid	8.06E-05
3	GO:0032432: actin filament bundle	1.42E-04
4	GO:0031977: thylakoid lumen	3.02E-04
5	GO:0009535: chloroplast thylakoid membrane	7.07E-04
6	GO:0009570: chloroplast stroma	7.57E-04
7	GO:0009543: chloroplast thylakoid lumen	7.66E-04
8	GO:0005884: actin filament	8.71E-04
9	GO:0009508: plastid chromosome	1.03E-03
10	GO:0016602: CCAAT-binding factor complex	1.03E-03
11	GO:0030095: chloroplast photosystem II	1.11E-03
12	GO:0009295: nucleoid	2.96E-03
13	GO:0009579: thylakoid	5.99E-03
14	GO:0010287: plastoglobule	9.48E-03
15	GO:0016020: membrane	9.53E-03
16	GO:0009941: chloroplast envelope	1.05E-02
17	GO:0005789: endoplasmic reticulum membrane	1.55E-02