Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G27980

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0048227: plasma membrane to endosome transport0.00E+00
2GO:1900409: positive regulation of cellular response to oxidative stress0.00E+00
3GO:0072722: response to amitrole0.00E+00
4GO:0043048: dolichyl monophosphate biosynthetic process0.00E+00
5GO:0017186: peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase0.00E+00
6GO:0042430: indole-containing compound metabolic process0.00E+00
7GO:0002376: immune system process0.00E+00
8GO:0010360: negative regulation of anion channel activity0.00E+00
9GO:1901017: negative regulation of potassium ion transmembrane transporter activity0.00E+00
10GO:0006793: phosphorus metabolic process0.00E+00
11GO:0046685: response to arsenic-containing substance9.99E-06
12GO:0009814: defense response, incompatible interaction1.13E-04
13GO:0046686: response to cadmium ion2.02E-04
14GO:0010265: SCF complex assembly2.48E-04
15GO:0080120: CAAX-box protein maturation2.48E-04
16GO:0071586: CAAX-box protein processing2.48E-04
17GO:0006805: xenobiotic metabolic process2.48E-04
18GO:0051245: negative regulation of cellular defense response2.48E-04
19GO:0010482: regulation of epidermal cell division2.48E-04
20GO:1990022: RNA polymerase III complex localization to nucleus2.48E-04
21GO:0033306: phytol metabolic process2.48E-04
22GO:0044376: RNA polymerase II complex import to nucleus2.48E-04
23GO:1902361: mitochondrial pyruvate transmembrane transport2.48E-04
24GO:0030163: protein catabolic process3.23E-04
25GO:0015031: protein transport4.33E-04
26GO:0018105: peptidyl-serine phosphorylation4.36E-04
27GO:0043069: negative regulation of programmed cell death4.74E-04
28GO:0009816: defense response to bacterium, incompatible interaction4.75E-04
29GO:0060919: auxin influx5.49E-04
30GO:0019441: tryptophan catabolic process to kynurenine5.49E-04
31GO:0046740: transport of virus in host, cell to cell5.49E-04
32GO:0051592: response to calcium ion5.49E-04
33GO:0031648: protein destabilization5.49E-04
34GO:0071395: cellular response to jasmonic acid stimulus5.49E-04
35GO:0015914: phospholipid transport5.49E-04
36GO:0006850: mitochondrial pyruvate transport5.49E-04
37GO:1902000: homogentisate catabolic process5.49E-04
38GO:0010541: acropetal auxin transport5.49E-04
39GO:0046777: protein autophosphorylation6.08E-04
40GO:0009407: toxin catabolic process7.01E-04
41GO:0035556: intracellular signal transduction8.29E-04
42GO:0010288: response to lead ion8.92E-04
43GO:0010351: lithium ion transport8.92E-04
44GO:0009410: response to xenobiotic stimulus8.92E-04
45GO:0010272: response to silver ion8.92E-04
46GO:0009072: aromatic amino acid family metabolic process8.92E-04
47GO:0048281: inflorescence morphogenesis8.92E-04
48GO:0010167: response to nitrate8.92E-04
49GO:0000289: nuclear-transcribed mRNA poly(A) tail shortening8.92E-04
50GO:0010359: regulation of anion channel activity8.92E-04
51GO:0006468: protein phosphorylation9.05E-04
52GO:0010150: leaf senescence9.61E-04
53GO:0009863: salicylic acid mediated signaling pathway1.09E-03
54GO:0009617: response to bacterium1.25E-03
55GO:0006882: cellular zinc ion homeostasis1.27E-03
56GO:0001676: long-chain fatty acid metabolic process1.27E-03
57GO:0048194: Golgi vesicle budding1.27E-03
58GO:0010071: root meristem specification1.27E-03
59GO:0034219: carbohydrate transmembrane transport1.27E-03
60GO:0006612: protein targeting to membrane1.27E-03
61GO:0010188: response to microbial phytotoxin1.70E-03
62GO:0080142: regulation of salicylic acid biosynthetic process1.70E-03
63GO:0046345: abscisic acid catabolic process1.70E-03
64GO:0010483: pollen tube reception1.70E-03
65GO:0010363: regulation of plant-type hypersensitive response1.70E-03
66GO:0051567: histone H3-K9 methylation1.70E-03
67GO:0055114: oxidation-reduction process1.76E-03
68GO:0006564: L-serine biosynthetic process2.17E-03
69GO:0030308: negative regulation of cell growth2.17E-03
70GO:0009697: salicylic acid biosynthetic process2.17E-03
71GO:0018258: protein O-linked glycosylation via hydroxyproline2.67E-03
72GO:0009228: thiamine biosynthetic process2.67E-03
73GO:0010405: arabinogalactan protein metabolic process2.67E-03
74GO:0006751: glutathione catabolic process2.67E-03
75GO:0043248: proteasome assembly2.67E-03
76GO:0070814: hydrogen sulfide biosynthetic process2.67E-03
77GO:1902456: regulation of stomatal opening2.67E-03
78GO:0010315: auxin efflux2.67E-03
79GO:0007264: small GTPase mediated signal transduction2.82E-03
80GO:0098655: cation transmembrane transport3.21E-03
81GO:0045454: cell redox homeostasis3.39E-03
82GO:0050790: regulation of catalytic activity3.79E-03
83GO:0071446: cellular response to salicylic acid stimulus3.79E-03
84GO:1900056: negative regulation of leaf senescence3.79E-03
85GO:0030026: cellular manganese ion homeostasis3.79E-03
86GO:0009615: response to virus3.81E-03
87GO:0010078: maintenance of root meristem identity4.39E-03
88GO:2000070: regulation of response to water deprivation4.39E-03
89GO:0050821: protein stabilization4.39E-03
90GO:0010492: maintenance of shoot apical meristem identity4.39E-03
91GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline4.39E-03
92GO:0009819: drought recovery4.39E-03
93GO:0006605: protein targeting4.39E-03
94GO:0030968: endoplasmic reticulum unfolded protein response5.03E-03
95GO:0043562: cellular response to nitrogen levels5.03E-03
96GO:0009699: phenylpropanoid biosynthetic process5.03E-03
97GO:0010112: regulation of systemic acquired resistance5.70E-03
98GO:0009056: catabolic process5.70E-03
99GO:0009051: pentose-phosphate shunt, oxidative branch5.70E-03
100GO:0009821: alkaloid biosynthetic process5.70E-03
101GO:0019432: triglyceride biosynthetic process5.70E-03
102GO:0006470: protein dephosphorylation6.18E-03
103GO:0009867: jasmonic acid mediated signaling pathway6.30E-03
104GO:0030042: actin filament depolymerization6.40E-03
105GO:0048354: mucilage biosynthetic process involved in seed coat development6.40E-03
106GO:0055062: phosphate ion homeostasis7.12E-03
107GO:0000103: sulfate assimilation7.12E-03
108GO:0006032: chitin catabolic process7.12E-03
109GO:0006631: fatty acid metabolic process7.49E-03
110GO:0015770: sucrose transport7.88E-03
111GO:0000272: polysaccharide catabolic process7.88E-03
112GO:0048765: root hair cell differentiation7.88E-03
113GO:0015706: nitrate transport8.66E-03
114GO:0009636: response to toxic substance9.14E-03
115GO:0006006: glucose metabolic process9.47E-03
116GO:0009846: pollen germination1.02E-02
117GO:0009887: animal organ morphogenesis1.03E-02
118GO:0010540: basipetal auxin transport1.03E-02
119GO:0002237: response to molecule of bacterial origin1.03E-02
120GO:0007034: vacuolar transport1.03E-02
121GO:0009738: abscisic acid-activated signaling pathway1.06E-02
122GO:0006486: protein glycosylation1.10E-02
123GO:0070588: calcium ion transmembrane transport1.12E-02
124GO:0010053: root epidermal cell differentiation1.12E-02
125GO:0046688: response to copper ion1.12E-02
126GO:0005985: sucrose metabolic process1.12E-02
127GO:0010200: response to chitin1.25E-02
128GO:2000377: regulation of reactive oxygen species metabolic process1.30E-02
129GO:0000027: ribosomal large subunit assembly1.30E-02
130GO:0009737: response to abscisic acid1.31E-02
131GO:0044550: secondary metabolite biosynthetic process1.33E-02
132GO:0006825: copper ion transport1.39E-02
133GO:0006874: cellular calcium ion homeostasis1.39E-02
134GO:0010026: trichome differentiation1.39E-02
135GO:0016998: cell wall macromolecule catabolic process1.49E-02
136GO:0015992: proton transport1.49E-02
137GO:0048278: vesicle docking1.49E-02
138GO:0006886: intracellular protein transport1.56E-02
139GO:0009624: response to nematode1.57E-02
140GO:0031348: negative regulation of defense response1.59E-02
141GO:0071456: cellular response to hypoxia1.59E-02
142GO:0009625: response to insect1.69E-02
143GO:0010091: trichome branching1.79E-02
144GO:0019722: calcium-mediated signaling1.79E-02
145GO:0080022: primary root development2.01E-02
146GO:0042391: regulation of membrane potential2.01E-02
147GO:0010087: phloem or xylem histogenesis2.01E-02
148GO:0042631: cellular response to water deprivation2.01E-02
149GO:0006662: glycerol ether metabolic process2.12E-02
150GO:0008152: metabolic process2.22E-02
151GO:0061025: membrane fusion2.23E-02
152GO:0006814: sodium ion transport2.23E-02
153GO:0042752: regulation of circadian rhythm2.23E-02
154GO:0009646: response to absence of light2.23E-02
155GO:0009790: embryo development2.29E-02
156GO:0008654: phospholipid biosynthetic process2.34E-02
157GO:0006623: protein targeting to vacuole2.34E-02
158GO:0010193: response to ozone2.46E-02
159GO:0000302: response to reactive oxygen species2.46E-02
160GO:0009630: gravitropism2.58E-02
161GO:0040008: regulation of growth2.59E-02
162GO:0006464: cellular protein modification process2.82E-02
163GO:0009734: auxin-activated signaling pathway3.01E-02
164GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process3.03E-02
165GO:0001666: response to hypoxia3.19E-02
166GO:0042742: defense response to bacterium3.19E-02
167GO:0009607: response to biotic stimulus3.32E-02
168GO:0009627: systemic acquired resistance3.46E-02
169GO:0042128: nitrate assimilation3.46E-02
170GO:0006906: vesicle fusion3.46E-02
171GO:0008219: cell death3.86E-02
172GO:0009817: defense response to fungus, incompatible interaction3.86E-02
173GO:0048767: root hair elongation4.00E-02
174GO:0010043: response to zinc ion4.28E-02
175GO:0048527: lateral root development4.28E-02
176GO:0010119: regulation of stomatal movement4.28E-02
177GO:0007049: cell cycle4.66E-02
178GO:0034599: cellular response to oxidative stress4.71E-02
179GO:0009723: response to ethylene4.83E-02
RankGO TermAdjusted P value
1GO:0016603: glutaminyl-peptide cyclotransferase activity0.00E+00
2GO:0016034: maleylacetoacetate isomerase activity0.00E+00
3GO:0004168: dolichol kinase activity0.00E+00
4GO:0050269: coniferyl-aldehyde dehydrogenase activity0.00E+00
5GO:0051670: inulinase activity0.00E+00
6GO:0004683: calmodulin-dependent protein kinase activity2.18E-06
7GO:0005516: calmodulin binding2.22E-06
8GO:0005093: Rab GDP-dissociation inhibitor activity1.03E-05
9GO:0009931: calcium-dependent protein serine/threonine kinase activity4.23E-05
10GO:0004364: glutathione transferase activity1.31E-04
11GO:0102391: decanoate--CoA ligase activity1.37E-04
12GO:0004467: long-chain fatty acid-CoA ligase activity1.80E-04
13GO:0005509: calcium ion binding1.86E-04
14GO:0031219: levanase activity2.48E-04
15GO:0004591: oxoglutarate dehydrogenase (succinyl-transferring) activity2.48E-04
16GO:0051669: fructan beta-fructosidase activity2.48E-04
17GO:0071949: FAD binding3.41E-04
18GO:0008794: arsenate reductase (glutaredoxin) activity5.47E-04
19GO:0032791: lead ion binding5.49E-04
20GO:0010296: prenylcysteine methylesterase activity5.49E-04
21GO:0004617: phosphoglycerate dehydrogenase activity5.49E-04
22GO:0001671: ATPase activator activity5.49E-04
23GO:0019172: glyoxalase III activity5.49E-04
24GO:0004061: arylformamidase activity5.49E-04
25GO:0050833: pyruvate transmembrane transporter activity8.92E-04
26GO:0004781: sulfate adenylyltransferase (ATP) activity8.92E-04
27GO:0008430: selenium binding8.92E-04
28GO:0016531: copper chaperone activity8.92E-04
29GO:0003840: gamma-glutamyltransferase activity8.92E-04
30GO:0036374: glutathione hydrolase activity8.92E-04
31GO:0031176: endo-1,4-beta-xylanase activity1.27E-03
32GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity1.27E-03
33GO:0000062: fatty-acyl-CoA binding1.70E-03
34GO:0015368: calcium:cation antiporter activity1.70E-03
35GO:0004345: glucose-6-phosphate dehydrogenase activity1.70E-03
36GO:0015369: calcium:proton antiporter activity1.70E-03
37GO:0010328: auxin influx transmembrane transporter activity1.70E-03
38GO:0005524: ATP binding2.11E-03
39GO:0004040: amidase activity2.17E-03
40GO:0005496: steroid binding2.17E-03
41GO:0031386: protein tag2.17E-03
42GO:0030976: thiamine pyrophosphate binding2.67E-03
43GO:0004605: phosphatidate cytidylyltransferase activity2.67E-03
44GO:1990714: hydroxyproline O-galactosyltransferase activity2.67E-03
45GO:0031593: polyubiquitin binding2.67E-03
46GO:0047714: galactolipase activity2.67E-03
47GO:0004029: aldehyde dehydrogenase (NAD) activity2.67E-03
48GO:0015035: protein disulfide oxidoreductase activity2.70E-03
49GO:0004656: procollagen-proline 4-dioxygenase activity3.21E-03
50GO:0004012: phospholipid-translocating ATPase activity3.21E-03
51GO:0004602: glutathione peroxidase activity3.21E-03
52GO:0004144: diacylglycerol O-acyltransferase activity3.21E-03
53GO:0016758: transferase activity, transferring hexosyl groups3.34E-03
54GO:0008320: protein transmembrane transporter activity3.79E-03
55GO:0043295: glutathione binding3.79E-03
56GO:0008506: sucrose:proton symporter activity3.79E-03
57GO:0004674: protein serine/threonine kinase activity4.25E-03
58GO:0015491: cation:cation antiporter activity4.39E-03
59GO:0008135: translation factor activity, RNA binding5.03E-03
60GO:0008970: phosphatidylcholine 1-acylhydrolase activity5.03E-03
61GO:0005096: GTPase activator activity5.22E-03
62GO:0008194: UDP-glycosyltransferase activity6.01E-03
63GO:0016844: strictosidine synthase activity6.40E-03
64GO:0015112: nitrate transmembrane transporter activity6.40E-03
65GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity6.40E-03
66GO:0004568: chitinase activity7.12E-03
67GO:0004713: protein tyrosine kinase activity7.12E-03
68GO:0005515: protein binding7.84E-03
69GO:0008559: xenobiotic-transporting ATPase activity7.88E-03
70GO:0008378: galactosyltransferase activity8.66E-03
71GO:0005198: structural molecule activity9.14E-03
72GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism9.47E-03
73GO:0005388: calcium-transporting ATPase activity9.47E-03
74GO:0000175: 3'-5'-exoribonuclease activity9.47E-03
75GO:0010329: auxin efflux transmembrane transporter activity9.47E-03
76GO:0008083: growth factor activity1.03E-02
77GO:0004175: endopeptidase activity1.03E-02
78GO:0004535: poly(A)-specific ribonuclease activity1.03E-02
79GO:0004190: aspartic-type endopeptidase activity1.12E-02
80GO:0030552: cAMP binding1.12E-02
81GO:0030553: cGMP binding1.12E-02
82GO:0008061: chitin binding1.12E-02
83GO:0003712: transcription cofactor activity1.12E-02
84GO:0004497: monooxygenase activity1.20E-02
85GO:0061630: ubiquitin protein ligase activity1.27E-02
86GO:0031418: L-ascorbic acid binding1.30E-02
87GO:0051087: chaperone binding1.39E-02
88GO:0043424: protein histidine kinase binding1.39E-02
89GO:0005216: ion channel activity1.39E-02
90GO:0080043: quercetin 3-O-glucosyltransferase activity1.43E-02
91GO:0080044: quercetin 7-O-glucosyltransferase activity1.43E-02
92GO:0019706: protein-cysteine S-palmitoyltransferase activity1.49E-02
93GO:0008408: 3'-5' exonuclease activity1.49E-02
94GO:0035251: UDP-glucosyltransferase activity1.49E-02
95GO:0004540: ribonuclease activity1.49E-02
96GO:0004298: threonine-type endopeptidase activity1.49E-02
97GO:0004722: protein serine/threonine phosphatase activity1.69E-02
98GO:0030246: carbohydrate binding1.74E-02
99GO:0047134: protein-disulfide reductase activity1.90E-02
100GO:0004672: protein kinase activity1.94E-02
101GO:0003924: GTPase activity1.96E-02
102GO:0005249: voltage-gated potassium channel activity2.01E-02
103GO:0030551: cyclic nucleotide binding2.01E-02
104GO:0016301: kinase activity2.03E-02
105GO:0004527: exonuclease activity2.12E-02
106GO:0004791: thioredoxin-disulfide reductase activity2.23E-02
107GO:0005525: GTP binding2.35E-02
108GO:0004197: cysteine-type endopeptidase activity2.58E-02
109GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor2.70E-02
110GO:0008237: metallopeptidase activity2.94E-02
111GO:0016597: amino acid binding3.07E-02
112GO:0042802: identical protein binding3.44E-02
113GO:0004806: triglyceride lipase activity3.59E-02
114GO:0003824: catalytic activity3.65E-02
115GO:0016787: hydrolase activity3.65E-02
116GO:0004222: metalloendopeptidase activity4.14E-02
117GO:0050897: cobalt ion binding4.28E-02
118GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors4.56E-02
119GO:0003746: translation elongation factor activity4.56E-02
120GO:0003697: single-stranded DNA binding4.56E-02
121GO:0016491: oxidoreductase activity4.74E-02
122GO:0000149: SNARE binding4.86E-02
123GO:0004712: protein serine/threonine/tyrosine kinase activity4.86E-02
RankGO TermAdjusted P value
1GO:0034455: t-UTP complex0.00E+00
2GO:0005886: plasma membrane2.50E-08
3GO:0005829: cytosol3.30E-06
4GO:0005789: endoplasmic reticulum membrane7.51E-06
5GO:0030139: endocytic vesicle1.03E-05
6GO:0005783: endoplasmic reticulum1.99E-05
7GO:0030014: CCR4-NOT complex2.48E-04
8GO:0008541: proteasome regulatory particle, lid subcomplex5.47E-04
9GO:0030134: ER to Golgi transport vesicle5.49E-04
10GO:0030176: integral component of endoplasmic reticulum membrane8.92E-04
11GO:0031461: cullin-RING ubiquitin ligase complex1.27E-03
12GO:0032585: multivesicular body membrane1.27E-03
13GO:0030658: transport vesicle membrane1.27E-03
14GO:0000502: proteasome complex1.66E-03
15GO:0005773: vacuole1.98E-03
16GO:0005794: Golgi apparatus2.51E-03
17GO:0005801: cis-Golgi network3.21E-03
18GO:0000794: condensed nuclear chromosome3.79E-03
19GO:0031305: integral component of mitochondrial inner membrane4.39E-03
20GO:0009506: plasmodesma4.73E-03
21GO:0009514: glyoxysome5.03E-03
22GO:0019773: proteasome core complex, alpha-subunit complex5.03E-03
23GO:0016021: integral component of membrane5.56E-03
24GO:0031901: early endosome membrane5.70E-03
25GO:0005819: spindle6.88E-03
26GO:0017119: Golgi transport complex7.12E-03
27GO:0005887: integral component of plasma membrane7.42E-03
28GO:0031902: late endosome membrane7.49E-03
29GO:0005768: endosome8.35E-03
30GO:0031012: extracellular matrix9.47E-03
31GO:0005764: lysosome1.03E-02
32GO:0005769: early endosome1.21E-02
33GO:0005774: vacuolar membrane1.28E-02
34GO:0005758: mitochondrial intermembrane space1.30E-02
35GO:0016020: membrane1.40E-02
36GO:0048046: apoplast1.42E-02
37GO:0005839: proteasome core complex1.49E-02
38GO:0015629: actin cytoskeleton1.69E-02
39GO:0005623: cell2.02E-02
40GO:0009524: phragmoplast2.07E-02
41GO:0005802: trans-Golgi network2.26E-02
42GO:0005737: cytoplasm2.45E-02
43GO:0005778: peroxisomal membrane2.94E-02
44GO:0030529: intracellular ribonucleoprotein complex3.19E-02
45GO:0000151: ubiquitin ligase complex3.86E-02
46GO:0000139: Golgi membrane4.93E-02
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Gene type



Gene DE type