Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G27390

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0071433: cell wall repair0.00E+00
2GO:0072660: maintenance of protein location in plasma membrane0.00E+00
3GO:0017186: peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase0.00E+00
4GO:0039694: viral RNA genome replication0.00E+00
5GO:0031564: transcription antitermination0.00E+00
6GO:0000466: maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)0.00E+00
7GO:2000072: regulation of defense response to fungus, incompatible interaction9.28E-08
8GO:0006177: GMP biosynthetic process3.77E-05
9GO:0051245: negative regulation of cellular defense response3.77E-05
10GO:0006422: aspartyl-tRNA aminoacylation3.77E-05
11GO:0009414: response to water deprivation8.73E-05
12GO:0010541: acropetal auxin transport9.40E-05
13GO:0051252: regulation of RNA metabolic process9.40E-05
14GO:0002221: pattern recognition receptor signaling pathway9.40E-05
15GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)9.40E-05
16GO:0031349: positive regulation of defense response9.40E-05
17GO:0009845: seed germination1.45E-04
18GO:0072661: protein targeting to plasma membrane1.63E-04
19GO:0006612: protein targeting to membrane2.40E-04
20GO:0015696: ammonium transport2.40E-04
21GO:0010148: transpiration2.40E-04
22GO:0000460: maturation of 5.8S rRNA3.24E-04
23GO:0080142: regulation of salicylic acid biosynthetic process3.24E-04
24GO:0072488: ammonium transmembrane transport3.24E-04
25GO:0010363: regulation of plant-type hypersensitive response3.24E-04
26GO:0045116: protein neddylation4.13E-04
27GO:0000470: maturation of LSU-rRNA5.07E-04
28GO:0000741: karyogamy5.07E-04
29GO:0009867: jasmonic acid mediated signaling pathway5.29E-04
30GO:0045087: innate immune response5.29E-04
31GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response6.05E-04
32GO:0050832: defense response to fungus7.32E-04
33GO:0009787: regulation of abscisic acid-activated signaling pathway8.13E-04
34GO:0009651: response to salt stress9.05E-04
35GO:0009409: response to cold1.04E-03
36GO:0007338: single fertilization1.04E-03
37GO:0009734: auxin-activated signaling pathway1.18E-03
38GO:0046686: response to cadmium ion1.28E-03
39GO:0043069: negative regulation of programmed cell death1.28E-03
40GO:0010105: negative regulation of ethylene-activated signaling pathway1.53E-03
41GO:0071365: cellular response to auxin stimulus1.53E-03
42GO:0006952: defense response2.17E-03
43GO:0009863: salicylic acid mediated signaling pathway2.25E-03
44GO:0010187: negative regulation of seed germination2.25E-03
45GO:0008380: RNA splicing2.54E-03
46GO:0009617: response to bacterium2.54E-03
47GO:0048278: vesicle docking2.56E-03
48GO:0007131: reciprocal meiotic recombination2.72E-03
49GO:0031348: negative regulation of defense response2.72E-03
50GO:0009625: response to insect2.89E-03
51GO:0009789: positive regulation of abscisic acid-activated signaling pathway3.22E-03
52GO:0008033: tRNA processing3.40E-03
53GO:0010501: RNA secondary structure unwinding3.40E-03
54GO:0042631: cellular response to water deprivation3.40E-03
55GO:0010197: polar nucleus fusion3.58E-03
56GO:0061025: membrane fusion3.76E-03
57GO:0009646: response to absence of light3.76E-03
58GO:0042742: defense response to bacterium3.84E-03
59GO:0000302: response to reactive oxygen species4.13E-03
60GO:0016192: vesicle-mediated transport4.26E-03
61GO:0046777: protein autophosphorylation4.33E-03
62GO:0030163: protein catabolic process4.51E-03
63GO:0009567: double fertilization forming a zygote and endosperm4.70E-03
64GO:0010252: auxin homeostasis4.70E-03
65GO:0006886: intracellular protein transport4.99E-03
66GO:0006906: vesicle fusion5.73E-03
67GO:0009817: defense response to fungus, incompatible interaction6.38E-03
68GO:0048527: lateral root development7.05E-03
69GO:0010119: regulation of stomatal movement7.05E-03
70GO:0009631: cold acclimation7.05E-03
71GO:0006099: tricarboxylic acid cycle7.75E-03
72GO:0006887: exocytosis8.47E-03
73GO:0000154: rRNA modification9.73E-03
74GO:0009965: leaf morphogenesis9.73E-03
75GO:0009737: response to abscisic acid1.00E-02
76GO:0009626: plant-type hypersensitive response1.30E-02
77GO:0009620: response to fungus1.33E-02
78GO:0009553: embryo sac development1.39E-02
79GO:0009624: response to nematode1.42E-02
80GO:0006511: ubiquitin-dependent protein catabolic process1.44E-02
81GO:0018105: peptidyl-serine phosphorylation1.45E-02
82GO:0006396: RNA processing1.45E-02
83GO:0006468: protein phosphorylation1.45E-02
84GO:0000398: mRNA splicing, via spliceosome1.57E-02
85GO:0009790: embryo development1.86E-02
86GO:0006413: translational initiation1.99E-02
87GO:0010150: leaf senescence2.09E-02
88GO:0006979: response to oxidative stress2.17E-02
89GO:0007166: cell surface receptor signaling pathway2.30E-02
90GO:0042254: ribosome biogenesis2.89E-02
91GO:0006970: response to osmotic stress3.01E-02
92GO:0006412: translation3.10E-02
93GO:0009723: response to ethylene3.16E-02
94GO:0048366: leaf development3.20E-02
95GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway3.40E-02
96GO:0009408: response to heat4.39E-02
97GO:0006281: DNA repair4.39E-02
98GO:0048364: root development4.52E-02
99GO:0009793: embryo development ending in seed dormancy4.94E-02
RankGO TermAdjusted P value
1GO:0001072: transcription antitermination factor activity, RNA binding0.00E+00
2GO:0016603: glutaminyl-peptide cyclotransferase activity0.00E+00
3GO:0000166: nucleotide binding1.89E-05
4GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity3.77E-05
5GO:0048037: cofactor binding3.77E-05
6GO:0004815: aspartate-tRNA ligase activity3.77E-05
7GO:0008428: ribonuclease inhibitor activity9.40E-05
8GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity9.40E-05
9GO:0004776: succinate-CoA ligase (GDP-forming) activity9.40E-05
10GO:0019781: NEDD8 activating enzyme activity9.40E-05
11GO:0043021: ribonucleoprotein complex binding9.40E-05
12GO:0003938: IMP dehydrogenase activity9.40E-05
13GO:0038199: ethylene receptor activity9.40E-05
14GO:0004775: succinate-CoA ligase (ADP-forming) activity9.40E-05
15GO:0051740: ethylene binding2.40E-04
16GO:0043495: protein anchor3.24E-04
17GO:0008641: small protein activating enzyme activity4.13E-04
18GO:0008948: oxaloacetate decarboxylase activity4.13E-04
19GO:0008519: ammonium transmembrane transporter activity5.07E-04
20GO:0008320: protein transmembrane transporter activity7.07E-04
21GO:0030515: snoRNA binding7.07E-04
22GO:0004673: protein histidine kinase activity1.28E-03
23GO:0000155: phosphorelay sensor kinase activity1.67E-03
24GO:0003712: transcription cofactor activity1.95E-03
25GO:0005515: protein binding2.17E-03
26GO:0005528: FK506 binding2.25E-03
27GO:0010181: FMN binding3.76E-03
28GO:0004872: receptor activity3.94E-03
29GO:0016491: oxidoreductase activity5.45E-03
30GO:0009931: calcium-dependent protein serine/threonine kinase activity5.73E-03
31GO:0004004: ATP-dependent RNA helicase activity5.94E-03
32GO:0004683: calmodulin-dependent protein kinase activity5.94E-03
33GO:0004672: protein kinase activity6.25E-03
34GO:0003697: single-stranded DNA binding7.51E-03
35GO:0000149: SNARE binding7.99E-03
36GO:0051539: 4 iron, 4 sulfur cluster binding8.23E-03
37GO:0005484: SNAP receptor activity8.96E-03
38GO:0003735: structural constituent of ribosome9.20E-03
39GO:0003755: peptidyl-prolyl cis-trans isomerase activity9.99E-03
40GO:0003690: double-stranded DNA binding1.13E-02
41GO:0016746: transferase activity, transferring acyl groups1.45E-02
42GO:0003723: RNA binding1.47E-02
43GO:0008026: ATP-dependent helicase activity1.48E-02
44GO:0005507: copper ion binding1.51E-02
45GO:0004386: helicase activity1.51E-02
46GO:0005516: calmodulin binding1.59E-02
47GO:0019843: rRNA binding1.66E-02
48GO:0005524: ATP binding1.71E-02
49GO:0016829: lyase activity1.76E-02
50GO:0004675: transmembrane receptor protein serine/threonine kinase activity1.99E-02
51GO:0046872: metal ion binding2.07E-02
52GO:0003676: nucleic acid binding2.31E-02
53GO:0003743: translation initiation factor activity2.33E-02
54GO:0004674: protein serine/threonine kinase activity2.89E-02
55GO:0003729: mRNA binding3.20E-02
56GO:0016301: kinase activity4.54E-02
RankGO TermAdjusted P value
1GO:0019034: viral replication complex0.00E+00
2GO:0005901: caveola9.40E-05
3GO:0070545: PeBoW complex9.40E-05
4GO:0080008: Cul4-RING E3 ubiquitin ligase complex4.10E-04
5GO:0019005: SCF ubiquitin ligase complex4.20E-04
6GO:0031428: box C/D snoRNP complex5.07E-04
7GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane7.07E-04
8GO:0030687: preribosome, large subunit precursor7.07E-04
9GO:0005829: cytosol9.62E-04
10GO:0005834: heterotrimeric G-protein complex1.12E-03
11GO:0005852: eukaryotic translation initiation factor 3 complex1.40E-03
12GO:0032040: small-subunit processome1.53E-03
13GO:0043234: protein complex2.10E-03
14GO:0009504: cell plate3.94E-03
15GO:0032580: Golgi cisterna membrane4.70E-03
16GO:0030529: intracellular ribonucleoprotein complex5.31E-03
17GO:0005789: endoplasmic reticulum membrane6.57E-03
18GO:0015934: large ribosomal subunit7.05E-03
19GO:0031201: SNARE complex8.47E-03
20GO:0005783: endoplasmic reticulum1.24E-02
21GO:0005681: spliceosomal complex1.24E-02
22GO:0016607: nuclear speck1.27E-02
23GO:0005886: plasma membrane1.39E-02
24GO:0005654: nucleoplasm1.63E-02
25GO:0005840: ribosome2.25E-02
26GO:0009506: plasmodesma3.22E-02
27GO:0005730: nucleolus3.63E-02
<
Gene type



Gene DE type