GO Enrichment Analysis of Co-expressed Genes with
AT1G27120
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0015739: sialic acid transport | 0.00E+00 |
| 2 | GO:0050732: negative regulation of peptidyl-tyrosine phosphorylation | 0.00E+00 |
| 3 | GO:0090470: shoot organ boundary specification | 0.00E+00 |
| 4 | GO:0031365: N-terminal protein amino acid modification | 4.05E-05 |
| 5 | GO:0016120: carotene biosynthetic process | 4.05E-05 |
| 6 | GO:1901259: chloroplast rRNA processing | 8.36E-05 |
| 7 | GO:0043686: co-translational protein modification | 1.82E-04 |
| 8 | GO:0043087: regulation of GTPase activity | 1.82E-04 |
| 9 | GO:1902458: positive regulation of stomatal opening | 1.82E-04 |
| 10 | GO:0071588: hydrogen peroxide mediated signaling pathway | 1.82E-04 |
| 11 | GO:0060627: regulation of vesicle-mediated transport | 1.82E-04 |
| 12 | GO:0071277: cellular response to calcium ion | 1.82E-04 |
| 13 | GO:0051180: vitamin transport | 1.82E-04 |
| 14 | GO:0030974: thiamine pyrophosphate transport | 1.82E-04 |
| 15 | GO:0048640: negative regulation of developmental growth | 1.82E-04 |
| 16 | GO:0010205: photoinhibition | 2.59E-04 |
| 17 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 4.10E-04 |
| 18 | GO:0015893: drug transport | 4.10E-04 |
| 19 | GO:0034755: iron ion transmembrane transport | 4.10E-04 |
| 20 | GO:0080005: photosystem stoichiometry adjustment | 4.10E-04 |
| 21 | GO:0010115: regulation of abscisic acid biosynthetic process | 4.10E-04 |
| 22 | GO:0006633: fatty acid biosynthetic process | 4.23E-04 |
| 23 | GO:0006636: unsaturated fatty acid biosynthetic process | 6.48E-04 |
| 24 | GO:0006954: inflammatory response | 6.69E-04 |
| 25 | GO:0010371: regulation of gibberellin biosynthetic process | 9.55E-04 |
| 26 | GO:0006166: purine ribonucleoside salvage | 9.55E-04 |
| 27 | GO:0010239: chloroplast mRNA processing | 9.55E-04 |
| 28 | GO:0006168: adenine salvage | 9.55E-04 |
| 29 | GO:0009765: photosynthesis, light harvesting | 1.27E-03 |
| 30 | GO:0008295: spermidine biosynthetic process | 1.27E-03 |
| 31 | GO:0031122: cytoplasmic microtubule organization | 1.27E-03 |
| 32 | GO:0010182: sugar mediated signaling pathway | 1.39E-03 |
| 33 | GO:0016123: xanthophyll biosynthetic process | 1.61E-03 |
| 34 | GO:0044209: AMP salvage | 1.61E-03 |
| 35 | GO:0006564: L-serine biosynthetic process | 1.61E-03 |
| 36 | GO:0010236: plastoquinone biosynthetic process | 1.61E-03 |
| 37 | GO:0045038: protein import into chloroplast thylakoid membrane | 1.61E-03 |
| 38 | GO:0006561: proline biosynthetic process | 1.98E-03 |
| 39 | GO:0009920: cell plate formation involved in plant-type cell wall biogenesis | 1.98E-03 |
| 40 | GO:0032973: amino acid export | 1.98E-03 |
| 41 | GO:0035435: phosphate ion transmembrane transport | 1.98E-03 |
| 42 | GO:0010019: chloroplast-nucleus signaling pathway | 2.38E-03 |
| 43 | GO:0071333: cellular response to glucose stimulus | 2.38E-03 |
| 44 | GO:0009955: adaxial/abaxial pattern specification | 2.38E-03 |
| 45 | GO:0042372: phylloquinone biosynthetic process | 2.38E-03 |
| 46 | GO:0010189: vitamin E biosynthetic process | 2.38E-03 |
| 47 | GO:0009395: phospholipid catabolic process | 2.80E-03 |
| 48 | GO:0043090: amino acid import | 2.80E-03 |
| 49 | GO:0010444: guard mother cell differentiation | 2.80E-03 |
| 50 | GO:0006400: tRNA modification | 2.80E-03 |
| 51 | GO:0007623: circadian rhythm | 2.96E-03 |
| 52 | GO:0016559: peroxisome fission | 3.24E-03 |
| 53 | GO:0008610: lipid biosynthetic process | 3.24E-03 |
| 54 | GO:0006353: DNA-templated transcription, termination | 3.24E-03 |
| 55 | GO:0009704: de-etiolation | 3.24E-03 |
| 56 | GO:2000070: regulation of response to water deprivation | 3.24E-03 |
| 57 | GO:0015996: chlorophyll catabolic process | 3.71E-03 |
| 58 | GO:0007186: G-protein coupled receptor signaling pathway | 3.71E-03 |
| 59 | GO:0032544: plastid translation | 3.71E-03 |
| 60 | GO:0015780: nucleotide-sugar transport | 4.20E-03 |
| 61 | GO:0090305: nucleic acid phosphodiester bond hydrolysis | 4.20E-03 |
| 62 | GO:0080144: amino acid homeostasis | 4.20E-03 |
| 63 | GO:0090333: regulation of stomatal closure | 4.20E-03 |
| 64 | GO:0042761: very long-chain fatty acid biosynthetic process | 4.71E-03 |
| 65 | GO:0009688: abscisic acid biosynthetic process | 5.24E-03 |
| 66 | GO:0019538: protein metabolic process | 5.24E-03 |
| 67 | GO:0008643: carbohydrate transport | 5.63E-03 |
| 68 | GO:0009773: photosynthetic electron transport in photosystem I | 5.79E-03 |
| 69 | GO:0008285: negative regulation of cell proliferation | 5.79E-03 |
| 70 | GO:0006879: cellular iron ion homeostasis | 5.79E-03 |
| 71 | GO:0009750: response to fructose | 5.79E-03 |
| 72 | GO:0045037: protein import into chloroplast stroma | 6.35E-03 |
| 73 | GO:0050826: response to freezing | 6.94E-03 |
| 74 | GO:0009718: anthocyanin-containing compound biosynthetic process | 6.94E-03 |
| 75 | GO:0009725: response to hormone | 6.94E-03 |
| 76 | GO:0006813: potassium ion transport | 7.02E-03 |
| 77 | GO:0006857: oligopeptide transport | 7.51E-03 |
| 78 | GO:0010143: cutin biosynthetic process | 7.55E-03 |
| 79 | GO:0010020: chloroplast fission | 7.55E-03 |
| 80 | GO:0010207: photosystem II assembly | 7.55E-03 |
| 81 | GO:0015979: photosynthesis | 8.02E-03 |
| 82 | GO:0010025: wax biosynthetic process | 8.82E-03 |
| 83 | GO:0010073: meristem maintenance | 1.02E-02 |
| 84 | GO:0051302: regulation of cell division | 1.02E-02 |
| 85 | GO:0006418: tRNA aminoacylation for protein translation | 1.02E-02 |
| 86 | GO:0016042: lipid catabolic process | 1.07E-02 |
| 87 | GO:0061077: chaperone-mediated protein folding | 1.09E-02 |
| 88 | GO:0031408: oxylipin biosynthetic process | 1.09E-02 |
| 89 | GO:0016998: cell wall macromolecule catabolic process | 1.09E-02 |
| 90 | GO:0010227: floral organ abscission | 1.23E-02 |
| 91 | GO:0009294: DNA mediated transformation | 1.23E-02 |
| 92 | GO:0019722: calcium-mediated signaling | 1.31E-02 |
| 93 | GO:0006817: phosphate ion transport | 1.31E-02 |
| 94 | GO:0016117: carotenoid biosynthetic process | 1.38E-02 |
| 95 | GO:0071555: cell wall organization | 1.64E-02 |
| 96 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 1.79E-02 |
| 97 | GO:0000302: response to reactive oxygen species | 1.79E-02 |
| 98 | GO:0007264: small GTPase mediated signal transduction | 1.87E-02 |
| 99 | GO:1901657: glycosyl compound metabolic process | 1.96E-02 |
| 100 | GO:0071805: potassium ion transmembrane transport | 2.14E-02 |
| 101 | GO:0007267: cell-cell signaling | 2.14E-02 |
| 102 | GO:0010027: thylakoid membrane organization | 2.32E-02 |
| 103 | GO:0042128: nitrate assimilation | 2.51E-02 |
| 104 | GO:0015995: chlorophyll biosynthetic process | 2.61E-02 |
| 105 | GO:0010411: xyloglucan metabolic process | 2.61E-02 |
| 106 | GO:0016311: dephosphorylation | 2.71E-02 |
| 107 | GO:0042254: ribosome biogenesis | 2.74E-02 |
| 108 | GO:0018298: protein-chromophore linkage | 2.81E-02 |
| 109 | GO:0000160: phosphorelay signal transduction system | 2.91E-02 |
| 110 | GO:0010311: lateral root formation | 2.91E-02 |
| 111 | GO:0009407: toxin catabolic process | 3.01E-02 |
| 112 | GO:0006412: translation | 3.04E-02 |
| 113 | GO:0009631: cold acclimation | 3.11E-02 |
| 114 | GO:0034599: cellular response to oxidative stress | 3.43E-02 |
| 115 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 3.44E-02 |
| 116 | GO:0006839: mitochondrial transport | 3.65E-02 |
| 117 | GO:0006631: fatty acid metabolic process | 3.76E-02 |
| 118 | GO:0009744: response to sucrose | 3.98E-02 |
| 119 | GO:0051707: response to other organism | 3.98E-02 |
| 120 | GO:0009640: photomorphogenesis | 3.98E-02 |
| 121 | GO:0042546: cell wall biogenesis | 4.09E-02 |
| 122 | GO:0009644: response to high light intensity | 4.21E-02 |
| 123 | GO:0009636: response to toxic substance | 4.32E-02 |
| 124 | GO:0006855: drug transmembrane transport | 4.44E-02 |
| 125 | GO:0042538: hyperosmotic salinity response | 4.68E-02 |
| 126 | GO:0006629: lipid metabolic process | 4.89E-02 |
| 127 | GO:0009736: cytokinin-activated signaling pathway | 4.92E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1990534: thermospermine oxidase activity | 0.00E+00 |
| 2 | GO:0005456: CMP-N-acetylneuraminate transmembrane transporter activity | 0.00E+00 |
| 3 | GO:0009673: low-affinity phosphate transmembrane transporter activity | 0.00E+00 |
| 4 | GO:0102344: 3-hydroxy-behenoyl-CoA dehydratase activity | 0.00E+00 |
| 5 | GO:0010301: xanthoxin dehydrogenase activity | 0.00E+00 |
| 6 | GO:0045435: lycopene epsilon cyclase activity | 0.00E+00 |
| 7 | GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity | 0.00E+00 |
| 8 | GO:0102550: 2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity | 0.00E+00 |
| 9 | GO:0015136: sialic acid transmembrane transporter activity | 0.00E+00 |
| 10 | GO:0090471: 9,15,9'-tri-cis-zeta-carotene isomerase activity | 0.00E+00 |
| 11 | GO:0102345: 3-hydroxy-lignoceroyl-CoA dehydratase activity | 0.00E+00 |
| 12 | GO:0008756: o-succinylbenzoate-CoA ligase activity | 0.00E+00 |
| 13 | GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity | 1.82E-04 |
| 14 | GO:0047259: glucomannan 4-beta-mannosyltransferase activity | 1.82E-04 |
| 15 | GO:0090422: thiamine pyrophosphate transporter activity | 1.82E-04 |
| 16 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 1.82E-04 |
| 17 | GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity | 1.82E-04 |
| 18 | GO:0042586: peptide deformylase activity | 1.82E-04 |
| 19 | GO:0045485: omega-6 fatty acid desaturase activity | 1.82E-04 |
| 20 | GO:0031957: very long-chain fatty acid-CoA ligase activity | 1.82E-04 |
| 21 | GO:0008568: microtubule-severing ATPase activity | 1.82E-04 |
| 22 | GO:0005080: protein kinase C binding | 1.82E-04 |
| 23 | GO:0019843: rRNA binding | 2.94E-04 |
| 24 | GO:0005215: transporter activity | 3.98E-04 |
| 25 | GO:0004617: phosphoglycerate dehydrogenase activity | 4.10E-04 |
| 26 | GO:0004766: spermidine synthase activity | 4.10E-04 |
| 27 | GO:0008805: carbon-monoxide oxygenase activity | 4.10E-04 |
| 28 | GO:0005528: FK506 binding | 7.17E-04 |
| 29 | GO:0001872: (1->3)-beta-D-glucan binding | 9.55E-04 |
| 30 | GO:0003999: adenine phosphoribosyltransferase activity | 9.55E-04 |
| 31 | GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity | 9.55E-04 |
| 32 | GO:0004040: amidase activity | 1.61E-03 |
| 33 | GO:0004518: nuclease activity | 1.82E-03 |
| 34 | GO:0004130: cytochrome-c peroxidase activity | 1.98E-03 |
| 35 | GO:0016208: AMP binding | 1.98E-03 |
| 36 | GO:0016688: L-ascorbate peroxidase activity | 1.98E-03 |
| 37 | GO:0016597: amino acid binding | 2.32E-03 |
| 38 | GO:0102391: decanoate--CoA ligase activity | 2.38E-03 |
| 39 | GO:0051753: mannan synthase activity | 2.38E-03 |
| 40 | GO:0004467: long-chain fatty acid-CoA ligase activity | 2.80E-03 |
| 41 | GO:0005338: nucleotide-sugar transmembrane transporter activity | 2.80E-03 |
| 42 | GO:0008235: metalloexopeptidase activity | 2.80E-03 |
| 43 | GO:0004620: phospholipase activity | 2.80E-03 |
| 44 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 3.71E-03 |
| 45 | GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors | 4.20E-03 |
| 46 | GO:0003993: acid phosphatase activity | 4.23E-03 |
| 47 | GO:0005381: iron ion transmembrane transporter activity | 4.71E-03 |
| 48 | GO:0016788: hydrolase activity, acting on ester bonds | 5.28E-03 |
| 49 | GO:0004177: aminopeptidase activity | 5.79E-03 |
| 50 | GO:0047372: acylglycerol lipase activity | 5.79E-03 |
| 51 | GO:0015293: symporter activity | 5.85E-03 |
| 52 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 6.08E-03 |
| 53 | GO:0031072: heat shock protein binding | 6.94E-03 |
| 54 | GO:0015114: phosphate ion transmembrane transporter activity | 6.94E-03 |
| 55 | GO:0004565: beta-galactosidase activity | 6.94E-03 |
| 56 | GO:0004022: alcohol dehydrogenase (NAD) activity | 6.94E-03 |
| 57 | GO:0005315: inorganic phosphate transmembrane transporter activity | 6.94E-03 |
| 58 | GO:0008131: primary amine oxidase activity | 7.55E-03 |
| 59 | GO:0052689: carboxylic ester hydrolase activity | 7.69E-03 |
| 60 | GO:0008146: sulfotransferase activity | 8.18E-03 |
| 61 | GO:0004725: protein tyrosine phosphatase activity | 8.82E-03 |
| 62 | GO:0015079: potassium ion transmembrane transporter activity | 1.02E-02 |
| 63 | GO:0008324: cation transmembrane transporter activity | 1.02E-02 |
| 64 | GO:0004176: ATP-dependent peptidase activity | 1.09E-02 |
| 65 | GO:0003924: GTPase activity | 1.11E-02 |
| 66 | GO:0022891: substrate-specific transmembrane transporter activity | 1.23E-02 |
| 67 | GO:0008514: organic anion transmembrane transporter activity | 1.31E-02 |
| 68 | GO:0004812: aminoacyl-tRNA ligase activity | 1.38E-02 |
| 69 | GO:0004872: receptor activity | 1.70E-02 |
| 70 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 1.79E-02 |
| 71 | GO:0000156: phosphorelay response regulator activity | 1.96E-02 |
| 72 | GO:0016759: cellulose synthase activity | 2.05E-02 |
| 73 | GO:0016168: chlorophyll binding | 2.42E-02 |
| 74 | GO:0016491: oxidoreductase activity | 2.48E-02 |
| 75 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 2.61E-02 |
| 76 | GO:0102483: scopolin beta-glucosidase activity | 2.61E-02 |
| 77 | GO:0030247: polysaccharide binding | 2.61E-02 |
| 78 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 2.71E-02 |
| 79 | GO:0005096: GTPase activator activity | 2.91E-02 |
| 80 | GO:0015238: drug transmembrane transporter activity | 2.91E-02 |
| 81 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 3.25E-02 |
| 82 | GO:0008422: beta-glucosidase activity | 3.54E-02 |
| 83 | GO:0051539: 4 iron, 4 sulfur cluster binding | 3.65E-02 |
| 84 | GO:0004364: glutathione transferase activity | 3.87E-02 |
| 85 | GO:0004185: serine-type carboxypeptidase activity | 3.98E-02 |
| 86 | GO:0004871: signal transducer activity | 4.17E-02 |
| 87 | GO:0043621: protein self-association | 4.21E-02 |
| 88 | GO:0035091: phosphatidylinositol binding | 4.21E-02 |
| 89 | GO:0005525: GTP binding | 4.26E-02 |
| 90 | GO:0003735: structural constituent of ribosome | 4.51E-02 |
| 91 | GO:0051287: NAD binding | 4.56E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 8.00E-18 |
| 2 | GO:0009535: chloroplast thylakoid membrane | 9.10E-08 |
| 3 | GO:0009941: chloroplast envelope | 5.23E-06 |
| 4 | GO:0009543: chloroplast thylakoid lumen | 2.93E-05 |
| 5 | GO:0009579: thylakoid | 8.20E-05 |
| 6 | GO:0009534: chloroplast thylakoid | 8.44E-05 |
| 7 | GO:0016021: integral component of membrane | 9.36E-05 |
| 8 | GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex | 1.82E-04 |
| 9 | GO:0009923: fatty acid elongase complex | 1.82E-04 |
| 10 | GO:0009528: plastid inner membrane | 6.69E-04 |
| 11 | GO:0009527: plastid outer membrane | 1.27E-03 |
| 12 | GO:0031969: chloroplast membrane | 1.31E-03 |
| 13 | GO:0009706: chloroplast inner membrane | 1.48E-03 |
| 14 | GO:0009570: chloroplast stroma | 2.77E-03 |
| 15 | GO:0009707: chloroplast outer membrane | 3.20E-03 |
| 16 | GO:0015934: large ribosomal subunit | 3.70E-03 |
| 17 | GO:0005763: mitochondrial small ribosomal subunit | 4.20E-03 |
| 18 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 4.20E-03 |
| 19 | GO:0009574: preprophase band | 6.94E-03 |
| 20 | GO:0009654: photosystem II oxygen evolving complex | 1.02E-02 |
| 21 | GO:0009532: plastid stroma | 1.09E-02 |
| 22 | GO:0009523: photosystem II | 1.70E-02 |
| 23 | GO:0019898: extrinsic component of membrane | 1.70E-02 |
| 24 | GO:0005840: ribosome | 1.76E-02 |
| 25 | GO:0005778: peroxisomal membrane | 2.14E-02 |
| 26 | GO:0010319: stromule | 2.14E-02 |
| 27 | GO:0046658: anchored component of plasma membrane | 2.30E-02 |
| 28 | GO:0031977: thylakoid lumen | 3.76E-02 |
| 29 | GO:0048046: apoplast | 4.16E-02 |
| 30 | GO:0005856: cytoskeleton | 4.32E-02 |