Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G27000

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0002376: immune system process0.00E+00
2GO:2000541: positive regulation of protein geranylgeranylation0.00E+00
3GO:0072722: response to amitrole0.00E+00
4GO:0048227: plasma membrane to endosome transport0.00E+00
5GO:0006014: D-ribose metabolic process4.50E-06
6GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process1.33E-05
7GO:0043069: negative regulation of programmed cell death2.99E-05
8GO:0018343: protein farnesylation3.77E-05
9GO:1902065: response to L-glutamate3.77E-05
10GO:0051245: negative regulation of cellular defense response3.77E-05
11GO:0019441: tryptophan catabolic process to kynurenine9.40E-05
12GO:0006423: cysteinyl-tRNA aminoacylation9.40E-05
13GO:0018342: protein prenylation1.63E-04
14GO:0010272: response to silver ion1.63E-04
15GO:0048281: inflorescence morphogenesis1.63E-04
16GO:0010150: leaf senescence2.04E-04
17GO:0019252: starch biosynthetic process2.06E-04
18GO:0007264: small GTPase mediated signal transduction2.37E-04
19GO:0006612: protein targeting to membrane2.40E-04
20GO:0009617: response to bacterium2.58E-04
21GO:0080142: regulation of salicylic acid biosynthetic process3.24E-04
22GO:0010363: regulation of plant-type hypersensitive response3.24E-04
23GO:0022622: root system development3.24E-04
24GO:0009816: defense response to bacterium, incompatible interaction3.42E-04
25GO:0009697: salicylic acid biosynthetic process4.13E-04
26GO:0007029: endoplasmic reticulum organization4.13E-04
27GO:0018344: protein geranylgeranylation4.13E-04
28GO:0009407: toxin catabolic process4.63E-04
29GO:0010200: response to chitin5.00E-04
30GO:0002238: response to molecule of fungal origin5.07E-04
31GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly5.07E-04
32GO:0006952: defense response5.17E-04
33GO:0071470: cellular response to osmotic stress6.05E-04
34GO:0009636: response to toxic substance7.56E-04
35GO:0043068: positive regulation of programmed cell death8.13E-04
36GO:0010928: regulation of auxin mediated signaling pathway8.13E-04
37GO:0009819: drought recovery8.13E-04
38GO:0006506: GPI anchor biosynthetic process8.13E-04
39GO:0010120: camalexin biosynthetic process9.23E-04
40GO:0030968: endoplasmic reticulum unfolded protein response9.23E-04
41GO:0043562: cellular response to nitrogen levels9.23E-04
42GO:0009808: lignin metabolic process9.23E-04
43GO:0051865: protein autoubiquitination1.04E-03
44GO:0010112: regulation of systemic acquired resistance1.04E-03
45GO:0010449: root meristem growth1.15E-03
46GO:0006032: chitin catabolic process1.28E-03
47GO:0046686: response to cadmium ion1.28E-03
48GO:0000272: polysaccharide catabolic process1.40E-03
49GO:0030148: sphingolipid biosynthetic process1.40E-03
50GO:0009682: induced systemic resistance1.40E-03
51GO:0052544: defense response by callose deposition in cell wall1.40E-03
52GO:0012501: programmed cell death1.53E-03
53GO:0055114: oxidation-reduction process1.62E-03
54GO:2000028: regulation of photoperiodism, flowering1.67E-03
55GO:0055046: microgametogenesis1.67E-03
56GO:0009934: regulation of meristem structural organization1.81E-03
57GO:0002237: response to molecule of bacterial origin1.81E-03
58GO:0070588: calcium ion transmembrane transport1.95E-03
59GO:0000162: tryptophan biosynthetic process2.10E-03
60GO:2000377: regulation of reactive oxygen species metabolic process2.25E-03
61GO:0009863: salicylic acid mediated signaling pathway2.25E-03
62GO:0016998: cell wall macromolecule catabolic process2.56E-03
63GO:0048278: vesicle docking2.56E-03
64GO:0009814: defense response, incompatible interaction2.72E-03
65GO:0030433: ubiquitin-dependent ERAD pathway2.72E-03
66GO:0071456: cellular response to hypoxia2.72E-03
67GO:0009625: response to insect2.89E-03
68GO:0042127: regulation of cell proliferation3.05E-03
69GO:0009306: protein secretion3.05E-03
70GO:0009561: megagametogenesis3.05E-03
71GO:0042631: cellular response to water deprivation3.40E-03
72GO:0009414: response to water deprivation3.73E-03
73GO:0061025: membrane fusion3.76E-03
74GO:0009646: response to absence of light3.76E-03
75GO:0042742: defense response to bacterium3.84E-03
76GO:0009851: auxin biosynthetic process3.94E-03
77GO:0000302: response to reactive oxygen species4.13E-03
78GO:0009630: gravitropism4.32E-03
79GO:0006904: vesicle docking involved in exocytosis4.90E-03
80GO:0006886: intracellular protein transport4.99E-03
81GO:0000910: cytokinesis5.11E-03
82GO:0015031: protein transport5.21E-03
83GO:0009615: response to virus5.31E-03
84GO:0009607: response to biotic stimulus5.52E-03
85GO:0009788: negative regulation of abscisic acid-activated signaling pathway5.52E-03
86GO:0009627: systemic acquired resistance5.73E-03
87GO:0006906: vesicle fusion5.73E-03
88GO:0008219: cell death6.38E-03
89GO:0009631: cold acclimation7.05E-03
90GO:0009867: jasmonic acid mediated signaling pathway7.51E-03
91GO:0045087: innate immune response7.51E-03
92GO:0016051: carbohydrate biosynthetic process7.51E-03
93GO:0006887: exocytosis8.47E-03
94GO:0000209: protein polyubiquitination9.22E-03
95GO:0009737: response to abscisic acid1.00E-02
96GO:0000165: MAPK cascade1.02E-02
97GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process1.02E-02
98GO:0009809: lignin biosynthetic process1.11E-02
99GO:0051603: proteolysis involved in cellular protein catabolic process1.13E-02
100GO:0048367: shoot system development1.27E-02
101GO:0051726: regulation of cell cycle1.48E-02
102GO:0009651: response to salt stress1.78E-02
103GO:0009790: embryo development1.86E-02
104GO:0006633: fatty acid biosynthetic process1.95E-02
105GO:0006979: response to oxidative stress2.17E-02
106GO:0006470: protein dephosphorylation2.30E-02
107GO:0007166: cell surface receptor signaling pathway2.30E-02
108GO:0009409: response to cold2.91E-02
109GO:0006970: response to osmotic stress3.01E-02
110GO:0007049: cell cycle3.08E-02
111GO:0009723: response to ethylene3.16E-02
112GO:0046777: protein autophosphorylation3.49E-02
RankGO TermAdjusted P value
1GO:0004660: protein farnesyltransferase activity0.00E+00
2GO:0047720: indoleacetaldoxime dehydratase activity0.00E+00
3GO:0005092: GDP-dissociation inhibitor activity0.00E+00
4GO:0005093: Rab GDP-dissociation inhibitor activity3.60E-07
5GO:0004747: ribokinase activity6.56E-06
6GO:0008865: fructokinase activity1.21E-05
7GO:0016491: oxidoreductase activity1.71E-05
8GO:2001147: camalexin binding3.77E-05
9GO:2001227: quercitrin binding3.77E-05
10GO:0033984: indole-3-glycerol-phosphate lyase activity3.77E-05
11GO:0061630: ubiquitin protein ligase activity4.28E-05
12GO:0045140: inositol phosphoceramide synthase activity9.40E-05
13GO:0004061: arylformamidase activity9.40E-05
14GO:0015036: disulfide oxidoreductase activity9.40E-05
15GO:0004817: cysteine-tRNA ligase activity9.40E-05
16GO:0004834: tryptophan synthase activity3.24E-04
17GO:0017137: Rab GTPase binding4.13E-04
18GO:0005096: GTPase activator activity4.41E-04
19GO:0036402: proteasome-activating ATPase activity5.07E-04
20GO:0004709: MAP kinase kinase kinase activity5.07E-04
21GO:0019900: kinase binding6.05E-04
22GO:0004364: glutathione transferase activity6.50E-04
23GO:0043295: glutathione binding7.07E-04
24GO:0052747: sinapyl alcohol dehydrogenase activity8.13E-04
25GO:0004311: farnesyltranstransferase activity8.13E-04
26GO:0004033: aldo-keto reductase (NADP) activity8.13E-04
27GO:0004568: chitinase activity1.28E-03
28GO:0045551: cinnamyl-alcohol dehydrogenase activity1.53E-03
29GO:0004022: alcohol dehydrogenase (NAD) activity1.67E-03
30GO:0005388: calcium-transporting ATPase activity1.67E-03
31GO:0017025: TBP-class protein binding1.95E-03
32GO:0008061: chitin binding1.95E-03
33GO:0005516: calmodulin binding2.64E-03
34GO:0008270: zinc ion binding3.30E-03
35GO:0050897: cobalt ion binding7.05E-03
36GO:0000149: SNARE binding7.99E-03
37GO:0005484: SNAP receptor activity8.96E-03
38GO:0016301: kinase activity1.50E-02
39GO:0005524: ATP binding1.71E-02
40GO:0008565: protein transporter activity1.89E-02
41GO:0004675: transmembrane receptor protein serine/threonine kinase activity1.99E-02
42GO:0004842: ubiquitin-protein transferase activity2.97E-02
43GO:0043565: sequence-specific DNA binding3.03E-02
44GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen3.99E-02
45GO:0004722: protein serine/threonine phosphatase activity4.03E-02
RankGO TermAdjusted P value
1GO:0005829: cytosol1.95E-05
2GO:0005965: protein farnesyltransferase complex3.77E-05
3GO:0031314: extrinsic component of mitochondrial inner membrane9.40E-05
4GO:0005968: Rab-protein geranylgeranyltransferase complex2.40E-04
5GO:0031597: cytosolic proteasome complex6.05E-04
6GO:0031595: nuclear proteasome complex7.07E-04
7GO:0005886: plasma membrane1.13E-03
8GO:0008540: proteasome regulatory particle, base subcomplex1.15E-03
9GO:0005789: endoplasmic reticulum membrane1.25E-03
10GO:0019898: extrinsic component of membrane3.94E-03
11GO:0005778: peroxisomal membrane4.90E-03
12GO:0031201: SNARE complex8.47E-03
13GO:0005856: cytoskeleton9.73E-03
14GO:0000502: proteasome complex1.11E-02
15GO:0012505: endomembrane system1.39E-02
16GO:0016021: integral component of membrane1.71E-02
17GO:0009524: phragmoplast1.73E-02
18GO:0005618: cell wall2.20E-02
19GO:0005737: cytoplasm2.93E-02
20GO:0005773: vacuole3.17E-02
21GO:0009506: plasmodesma3.22E-02
22GO:0005743: mitochondrial inner membrane4.17E-02
23GO:0043231: intracellular membrane-bounded organelle4.70E-02
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Gene type



Gene DE type