Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G25580

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0071433: cell wall repair0.00E+00
2GO:2001143: N-methylnicotinate transport0.00E+00
3GO:2001142: nicotinate transport0.00E+00
4GO:0006468: protein phosphorylation6.70E-07
5GO:0060548: negative regulation of cell death1.81E-06
6GO:0007166: cell surface receptor signaling pathway1.52E-05
7GO:0017183: peptidyl-diphthamide biosynthetic process from peptidyl-histidine3.90E-05
8GO:0006422: aspartyl-tRNA aminoacylation3.90E-05
9GO:0002143: tRNA wobble position uridine thiolation3.90E-05
10GO:0006680: glucosylceramide catabolic process3.90E-05
11GO:0080181: lateral root branching9.72E-05
12GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)9.72E-05
13GO:0051258: protein polymerization9.72E-05
14GO:0042742: defense response to bacterium1.01E-04
15GO:0031348: negative regulation of defense response1.20E-04
16GO:0072661: protein targeting to plasma membrane1.68E-04
17GO:0006517: protein deglycosylation1.68E-04
18GO:0015695: organic cation transport1.68E-04
19GO:0016045: detection of bacterium1.68E-04
20GO:1900140: regulation of seedling development1.68E-04
21GO:0007276: gamete generation2.48E-04
22GO:0015696: ammonium transport2.48E-04
23GO:0071323: cellular response to chitin2.48E-04
24GO:0072488: ammonium transmembrane transport3.33E-04
25GO:0031365: N-terminal protein amino acid modification4.25E-04
26GO:0008219: cell death4.39E-04
27GO:0006499: N-terminal protein myristoylation4.83E-04
28GO:0006777: Mo-molybdopterin cofactor biosynthetic process5.22E-04
29GO:0009920: cell plate formation involved in plant-type cell wall biogenesis5.22E-04
30GO:0006694: steroid biosynthetic process6.22E-04
31GO:0043090: amino acid import7.28E-04
32GO:0006491: N-glycan processing8.37E-04
33GO:0006002: fructose 6-phosphate metabolic process9.50E-04
34GO:0009620: response to fungus1.20E-03
35GO:0000103: sulfate assimilation1.31E-03
36GO:0010102: lateral root morphogenesis1.72E-03
37GO:0010053: root epidermal cell differentiation2.01E-03
38GO:0006952: defense response2.35E-03
39GO:0051302: regulation of cell division2.48E-03
40GO:0010227: floral organ abscission2.97E-03
41GO:0042391: regulation of membrane potential3.50E-03
42GO:0050832: defense response to fungus3.65E-03
43GO:0006662: glycerol ether metabolic process3.69E-03
44GO:0010197: polar nucleus fusion3.69E-03
45GO:0010183: pollen tube guidance4.06E-03
46GO:0080167: response to karrikin4.23E-03
47GO:0010200: response to chitin4.37E-03
48GO:0016192: vesicle-mediated transport4.45E-03
49GO:0009615: response to virus5.47E-03
50GO:0009607: response to biotic stimulus5.69E-03
51GO:0006906: vesicle fusion5.91E-03
52GO:0032259: methylation5.97E-03
53GO:0009817: defense response to fungus, incompatible interaction6.58E-03
54GO:0010311: lateral root formation6.80E-03
55GO:0010119: regulation of stomatal movement7.27E-03
56GO:0006865: amino acid transport7.51E-03
57GO:0045087: innate immune response7.75E-03
58GO:0034599: cellular response to oxidative stress7.99E-03
59GO:0006887: exocytosis8.74E-03
60GO:0008643: carbohydrate transport9.77E-03
61GO:0006096: glycolytic process1.28E-02
62GO:0009626: plant-type hypersensitive response1.34E-02
63GO:0009624: response to nematode1.46E-02
64GO:0009742: brassinosteroid mediated signaling pathway1.52E-02
65GO:0045490: pectin catabolic process2.16E-02
66GO:0010150: leaf senescence2.16E-02
67GO:0010468: regulation of gene expression2.45E-02
68GO:0006810: transport3.30E-02
69GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway3.51E-02
70GO:0046777: protein autophosphorylation3.60E-02
71GO:0045454: cell redox homeostasis3.90E-02
72GO:0006886: intracellular protein transport3.99E-02
73GO:0009751: response to salicylic acid4.48E-02
74GO:0048364: root development4.66E-02
75GO:0007165: signal transduction4.66E-02
RankGO TermAdjusted P value
1GO:0090416: nicotinate transporter activity0.00E+00
2GO:0061604: molybdopterin-synthase sulfurtransferase activity0.00E+00
3GO:0004164: diphthine synthase activity0.00E+00
4GO:0061605: molybdopterin-synthase adenylyltransferase activity0.00E+00
5GO:0090417: N-methylnicotinate transporter activity0.00E+00
6GO:0005524: ATP binding1.55E-07
7GO:0004714: transmembrane receptor protein tyrosine kinase activity1.29E-05
8GO:0004815: aspartate-tRNA ligase activity3.90E-05
9GO:0033925: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity3.90E-05
10GO:0004348: glucosylceramidase activity3.90E-05
11GO:0004674: protein serine/threonine kinase activity8.27E-05
12GO:0043021: ribonucleoprotein complex binding9.72E-05
13GO:0016301: kinase activity1.01E-04
14GO:0033612: receptor serine/threonine kinase binding1.08E-04
15GO:0052692: raffinose alpha-galactosidase activity1.68E-04
16GO:0008265: Mo-molybdopterin cofactor sulfurase activity1.68E-04
17GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity1.68E-04
18GO:0004557: alpha-galactosidase activity1.68E-04
19GO:0004675: transmembrane receptor protein serine/threonine kinase activity1.97E-04
20GO:0004792: thiosulfate sulfurtransferase activity2.48E-04
21GO:0004576: oligosaccharyl transferase activity3.33E-04
22GO:0008641: small protein activating enzyme activity4.25E-04
23GO:0008519: ammonium transmembrane transporter activity5.22E-04
24GO:0008235: metalloexopeptidase activity7.28E-04
25GO:0003872: 6-phosphofructokinase activity7.28E-04
26GO:0004177: aminopeptidase activity1.44E-03
27GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.72E-03
28GO:0030552: cAMP binding2.01E-03
29GO:0030553: cGMP binding2.01E-03
30GO:0008061: chitin binding2.01E-03
31GO:0005216: ion channel activity2.48E-03
32GO:0005516: calmodulin binding2.80E-03
33GO:0022891: substrate-specific transmembrane transporter activity2.97E-03
34GO:0008514: organic anion transmembrane transporter activity3.15E-03
35GO:0008168: methyltransferase activity3.29E-03
36GO:0047134: protein-disulfide reductase activity3.32E-03
37GO:0005249: voltage-gated potassium channel activity3.50E-03
38GO:0030551: cyclic nucleotide binding3.50E-03
39GO:0030276: clathrin binding3.69E-03
40GO:0043531: ADP binding3.75E-03
41GO:0004791: thioredoxin-disulfide reductase activity3.87E-03
42GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor4.65E-03
43GO:0016798: hydrolase activity, acting on glycosyl bonds6.13E-03
44GO:0030247: polysaccharide binding6.13E-03
45GO:0004672: protein kinase activity6.62E-03
46GO:0000149: SNARE binding8.24E-03
47GO:0005484: SNAP receptor activity9.25E-03
48GO:0015293: symporter activity1.00E-02
49GO:0000166: nucleotide binding1.11E-02
50GO:0015171: amino acid transmembrane transporter activity1.23E-02
51GO:0022857: transmembrane transporter activity1.40E-02
52GO:0015035: protein disulfide oxidoreductase activity1.49E-02
53GO:0015144: carbohydrate transmembrane transporter activity1.95E-02
54GO:0008565: protein transporter activity1.95E-02
55GO:0005351: sugar:proton symporter activity2.12E-02
56GO:0000287: magnesium ion binding2.90E-02
57GO:0042803: protein homodimerization activity4.03E-02
RankGO TermAdjusted P value
1GO:0005886: plasma membrane9.58E-12
2GO:0016021: integral component of membrane4.62E-05
3GO:0070545: PeBoW complex9.72E-05
4GO:0009506: plasmodesma2.30E-04
5GO:0005945: 6-phosphofructokinase complex4.25E-04
6GO:0030687: preribosome, large subunit precursor7.28E-04
7GO:0030131: clathrin adaptor complex8.37E-04
8GO:0031901: early endosome membrane1.07E-03
9GO:0030665: clathrin-coated vesicle membrane1.19E-03
10GO:0019898: extrinsic component of membrane4.06E-03
11GO:0009504: cell plate4.06E-03
12GO:0009505: plant-type cell wall5.41E-03
13GO:0016020: membrane6.74E-03
14GO:0005887: integral component of plasma membrane8.45E-03
15GO:0031201: SNARE complex8.74E-03
16GO:0090406: pollen tube9.25E-03
17GO:0005768: endosome2.02E-02
18GO:0080008: Cul4-RING E3 ubiquitin ligase complex3.14E-02
19GO:0005773: vacuole3.35E-02
20GO:0005783: endoplasmic reticulum4.69E-02
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Gene type



Gene DE type