co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G24793

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010793: regulation of mRNA export from nucleus	0.00E+00
2	GO:0048867: stem cell fate determination	0.00E+00
3	GO:0000478: endonucleolytic cleavage involved in rRNA processing	0.00E+00
4	GO:0010499: proteasomal ubiquitin-independent protein catabolic process	0.00E+00
5	GO:0000188: inactivation of MAPK activity	0.00E+00
6	GO:0080056: petal vascular tissue pattern formation	0.00E+00
7	GO:2001253: regulation of histone H3-K36 trimethylation	0.00E+00
8	GO:0002764: immune response-regulating signaling pathway	0.00E+00
9	GO:0009312: oligosaccharide biosynthetic process	0.00E+00
10	GO:0006987: activation of signaling protein activity involved in unfolded protein response	0.00E+00
11	GO:0080057: sepal vascular tissue pattern formation	0.00E+00
12	GO:0032497: detection of lipopolysaccharide	0.00E+00
13	GO:0006983: ER overload response	0.00E+00
14	GO:0071578: zinc II ion transmembrane import	0.00E+00
15	GO:0006468: protein phosphorylation	2.14E-05
16	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	8.03E-05
17	GO:0006014: D-ribose metabolic process	9.03E-05
18	GO:0098721: uracil import across plasma membrane	2.34E-04
19	GO:0098702: adenine import across plasma membrane	2.34E-04
20	GO:0035266: meristem growth	2.34E-04
21	GO:0098710: guanine import across plasma membrane	2.34E-04
22	GO:0048363: mucilage pectin metabolic process	2.34E-04
23	GO:0071596: ubiquitin-dependent protein catabolic process via the N-end rule pathway	2.34E-04
24	GO:0007292: female gamete generation	2.34E-04
25	GO:0010365: positive regulation of ethylene biosynthetic process	2.34E-04
26	GO:0000303: response to superoxide	2.34E-04
27	GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic	2.34E-04
28	GO:0035344: hypoxanthine transport	2.34E-04
29	GO:0048367: shoot system development	2.85E-04
30	GO:0048366: leaf development	4.21E-04
31	GO:0043069: negative regulation of programmed cell death	4.36E-04
32	GO:0042325: regulation of phosphorylation	5.20E-04
33	GO:0019441: tryptophan catabolic process to kynurenine	5.20E-04
34	GO:0050684: regulation of mRNA processing	5.20E-04
35	GO:0050994: regulation of lipid catabolic process	5.20E-04
36	GO:0009727: detection of ethylene stimulus	5.20E-04
37	GO:0019374: galactolipid metabolic process	5.20E-04
38	GO:0007584: response to nutrient	5.20E-04
39	GO:0051788: response to misfolded protein	5.20E-04
40	GO:0043066: negative regulation of apoptotic process	5.20E-04
41	GO:0051258: protein polymerization	5.20E-04
42	GO:0045087: innate immune response	7.52E-04
43	GO:0042780: tRNA 3'-end processing	8.44E-04
44	GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic	8.44E-04
45	GO:0060968: regulation of gene silencing	8.44E-04
46	GO:1900055: regulation of leaf senescence	8.44E-04
47	GO:0032784: regulation of DNA-templated transcription, elongation	8.44E-04
48	GO:0016045: detection of bacterium	8.44E-04
49	GO:0010359: regulation of anion channel activity	8.44E-04
50	GO:0010150: leaf senescence	8.47E-04
51	GO:2000377: regulation of reactive oxygen species metabolic process	1.01E-03
52	GO:0006874: cellular calcium ion homeostasis	1.11E-03
53	GO:0000187: activation of MAPK activity	1.20E-03
54	GO:0010116: positive regulation of abscisic acid biosynthetic process	1.20E-03
55	GO:1901000: regulation of response to salt stress	1.20E-03
56	GO:0070301: cellular response to hydrogen peroxide	1.20E-03
57	GO:0072334: UDP-galactose transmembrane transport	1.20E-03
58	GO:0015749: monosaccharide transport	1.20E-03
59	GO:0006809: nitric oxide biosynthetic process	1.20E-03
60	GO:0009399: nitrogen fixation	1.20E-03
61	GO:0080001: mucilage extrusion from seed coat	1.20E-03
62	GO:0006542: glutamine biosynthetic process	1.61E-03
63	GO:0033320: UDP-D-xylose biosynthetic process	1.61E-03
64	GO:0010107: potassium ion import	1.61E-03
65	GO:0061088: regulation of sequestering of zinc ion	1.61E-03
66	GO:0046686: response to cadmium ion	1.90E-03
67	GO:0009626: plant-type hypersensitive response	2.00E-03
68	GO:0005513: detection of calcium ion	2.05E-03
69	GO:0007029: endoplasmic reticulum organization	2.05E-03
70	GO:0010225: response to UV-C	2.05E-03
71	GO:0006090: pyruvate metabolic process	2.05E-03
72	GO:0048544: recognition of pollen	2.12E-03
73	GO:0019252: starch biosynthetic process	2.27E-03
74	GO:0046777: protein autophosphorylation	2.51E-03
75	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	2.52E-03
76	GO:0048827: phyllome development	2.52E-03
77	GO:0006388: tRNA splicing, via endonucleolytic cleavage and ligation	2.52E-03
78	GO:0048232: male gamete generation	2.52E-03
79	GO:0043248: proteasome assembly	2.52E-03
80	GO:0042732: D-xylose metabolic process	2.52E-03
81	GO:1900425: negative regulation of defense response to bacterium	2.52E-03
82	GO:2000037: regulation of stomatal complex patterning	3.03E-03
83	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	3.03E-03
84	GO:0009612: response to mechanical stimulus	3.03E-03
85	GO:0048280: vesicle fusion with Golgi apparatus	3.03E-03
86	GO:1902074: response to salt	3.58E-03
87	GO:0009816: defense response to bacterium, incompatible interaction	3.71E-03
88	GO:0006875: cellular metal ion homeostasis	4.15E-03
89	GO:0010078: maintenance of root meristem identity	4.15E-03
90	GO:0016559: peroxisome fission	4.15E-03
91	GO:0006644: phospholipid metabolic process	4.15E-03
92	GO:1900150: regulation of defense response to fungus	4.15E-03
93	GO:0048364: root development	4.37E-03
94	GO:0010204: defense response signaling pathway, resistance gene-independent	4.74E-03
95	GO:0030968: endoplasmic reticulum unfolded protein response	4.74E-03
96	GO:0009827: plant-type cell wall modification	4.74E-03
97	GO:0006499: N-terminal protein myristoylation	5.04E-03
98	GO:0009051: pentose-phosphate shunt, oxidative branch	5.37E-03
99	GO:0009821: alkaloid biosynthetic process	5.37E-03
100	GO:0006470: protein dephosphorylation	5.55E-03
101	GO:0016051: carbohydrate biosynthetic process	5.79E-03
102	GO:0008202: steroid metabolic process	6.03E-03
103	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	6.03E-03
104	GO:0048829: root cap development	6.71E-03
105	GO:0010629: negative regulation of gene expression	6.71E-03
106	GO:0006896: Golgi to vacuole transport	6.71E-03
107	GO:0007064: mitotic sister chromatid cohesion	6.71E-03
108	GO:0030148: sphingolipid biosynthetic process	7.43E-03
109	GO:0010015: root morphogenesis	7.43E-03
110	GO:0000038: very long-chain fatty acid metabolic process	7.43E-03
111	GO:0008283: cell proliferation	7.46E-03
112	GO:0071365: cellular response to auxin stimulus	8.17E-03
113	GO:0000266: mitochondrial fission	8.17E-03
114	GO:0012501: programmed cell death	8.17E-03
115	GO:0010152: pollen maturation	8.17E-03
116	GO:0006108: malate metabolic process	8.93E-03
117	GO:0010229: inflorescence development	8.93E-03
118	GO:0010588: cotyledon vascular tissue pattern formation	8.93E-03
119	GO:0010102: lateral root morphogenesis	8.93E-03
120	GO:0006812: cation transport	9.38E-03
121	GO:0006446: regulation of translational initiation	9.72E-03
122	GO:0007034: vacuolar transport	9.72E-03
123	GO:0009933: meristem structural organization	9.72E-03
124	GO:0009723: response to ethylene	9.82E-03
125	GO:0090351: seedling development	1.05E-02
126	GO:0009225: nucleotide-sugar metabolic process	1.05E-02
127	GO:0006096: glycolytic process	1.19E-02
128	GO:0010073: meristem maintenance	1.31E-02
129	GO:0006825: copper ion transport	1.31E-02
130	GO:0051260: protein homooligomerization	1.40E-02
131	GO:0009814: defense response, incompatible interaction	1.50E-02
132	GO:0030433: ubiquitin-dependent ERAD pathway	1.50E-02
133	GO:0071369: cellular response to ethylene stimulus	1.59E-02
134	GO:0010227: floral organ abscission	1.59E-02
135	GO:0009751: response to salicylic acid	1.73E-02
136	GO:0042147: retrograde transport, endosome to Golgi	1.79E-02
137	GO:0010118: stomatal movement	1.89E-02
138	GO:0046323: glucose import	1.99E-02
139	GO:0006885: regulation of pH	1.99E-02
140	GO:0010305: leaf vascular tissue pattern formation	1.99E-02
141	GO:0009790: embryo development	2.11E-02
142	GO:0006623: protein targeting to vacuole	2.20E-02
143	GO:0009749: response to glucose	2.20E-02
144	GO:0006891: intra-Golgi vesicle-mediated transport	2.31E-02
145	GO:0006635: fatty acid beta-oxidation	2.31E-02
146	GO:0071554: cell wall organization or biogenesis	2.31E-02
147	GO:0000302: response to reactive oxygen species	2.31E-02
148	GO:0010193: response to ozone	2.31E-02
149	GO:0009630: gravitropism	2.42E-02
150	GO:0007264: small GTPase mediated signal transduction	2.42E-02
151	GO:0010583: response to cyclopentenone	2.42E-02
152	GO:0016032: viral process	2.42E-02
153	GO:0006914: autophagy	2.65E-02
154	GO:0010252: auxin homeostasis	2.65E-02
155	GO:0009414: response to water deprivation	2.72E-02
156	GO:0006904: vesicle docking involved in exocytosis	2.77E-02
157	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	2.79E-02
158	GO:0016579: protein deubiquitination	2.89E-02
159	GO:0010468: regulation of gene expression	2.97E-02
160	GO:0009615: response to virus	3.01E-02
161	GO:0010029: regulation of seed germination	3.13E-02
162	GO:0042128: nitrate assimilation	3.25E-02
163	GO:0006888: ER to Golgi vesicle-mediated transport	3.38E-02
164	GO:0016049: cell growth	3.50E-02
165	GO:0010311: lateral root formation	3.76E-02
166	GO:0016310: phosphorylation	3.96E-02
167	GO:0010043: response to zinc ion	4.03E-02
168	GO:0010119: regulation of stomatal movement	4.03E-02
169	GO:0006970: response to osmotic stress	4.14E-02
170	GO:0009867: jasmonic acid mediated signaling pathway	4.30E-02
171	GO:0006099: tricarboxylic acid cycle	4.43E-02
172	GO:0006887: exocytosis	4.85E-02
173	GO:0006897: endocytosis	4.85E-02
174	GO:0016192: vesicle-mediated transport	5.00E-02

Rank	GO Term	Adjusted P value
1	GO:0016504: peptidase activator activity	0.00E+00
2	GO:0017017: MAP kinase tyrosine/serine/threonine phosphatase activity	0.00E+00
3	GO:0032442: phenylcoumaran benzylic ether reductase activity	0.00E+00
4	GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity	0.00E+00
5	GO:0070577: lysine-acetylated histone binding	0.00E+00
6	GO:0005358: high-affinity hydrogen:glucose symporter activity	0.00E+00
7	GO:0016301: kinase activity	6.86E-10
8	GO:0004674: protein serine/threonine kinase activity	4.58E-08
9	GO:0005524: ATP binding	3.20E-07
10	GO:0019829: cation-transporting ATPase activity	9.29E-06
11	GO:0004747: ribokinase activity	1.24E-04
12	GO:0008865: fructokinase activity	2.09E-04
13	GO:0009679: hexose:proton symporter activity	2.34E-04
14	GO:0015208: guanine transmembrane transporter activity	2.34E-04
15	GO:0004112: cyclic-nucleotide phosphodiesterase activity	2.34E-04
16	GO:0015294: solute:cation symporter activity	2.34E-04
17	GO:0016274: protein-arginine N-methyltransferase activity	2.34E-04
18	GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity	2.34E-04
19	GO:0015207: adenine transmembrane transporter activity	2.34E-04
20	GO:0019707: protein-cysteine S-acyltransferase activity	2.34E-04
21	GO:0030955: potassium ion binding	3.73E-04
22	GO:0004743: pyruvate kinase activity	3.73E-04
23	GO:0016891: endoribonuclease activity, producing 5'-phosphomonoesters	5.20E-04
24	GO:0045140: inositol phosphoceramide synthase activity	5.20E-04
25	GO:0004061: arylformamidase activity	5.20E-04
26	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	6.54E-04
27	GO:0004383: guanylate cyclase activity	8.44E-04
28	GO:0016805: dipeptidase activity	8.44E-04
29	GO:0004473: malate dehydrogenase (decarboxylating) (NADP+) activity	8.44E-04
30	GO:0042781: 3'-tRNA processing endoribonuclease activity	8.44E-04
31	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	8.44E-04
32	GO:0005515: protein binding	8.45E-04
33	GO:0001653: peptide receptor activity	1.20E-03
34	GO:0004108: citrate (Si)-synthase activity	1.20E-03
35	GO:0016652: oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor	1.61E-03
36	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.61E-03
37	GO:0004471: malate dehydrogenase (decarboxylating) (NAD+) activity	1.61E-03
38	GO:0015210: uracil transmembrane transporter activity	1.61E-03
39	GO:0070628: proteasome binding	1.61E-03
40	GO:0004470: malic enzyme activity	1.61E-03
41	GO:0019199: transmembrane receptor protein kinase activity	1.61E-03
42	GO:0005496: steroid binding	2.05E-03
43	GO:0004356: glutamate-ammonia ligase activity	2.05E-03
44	GO:0005459: UDP-galactose transmembrane transporter activity	2.05E-03
45	GO:0015145: monosaccharide transmembrane transporter activity	2.05E-03
46	GO:0008948: oxaloacetate decarboxylase activity	2.05E-03
47	GO:0036402: proteasome-activating ATPase activity	2.52E-03
48	GO:0048040: UDP-glucuronate decarboxylase activity	2.52E-03
49	GO:0015562: efflux transmembrane transporter activity	2.52E-03
50	GO:0004556: alpha-amylase activity	2.52E-03
51	GO:0070403: NAD+ binding	3.03E-03
52	GO:0003950: NAD+ ADP-ribosyltransferase activity	3.03E-03
53	GO:0004012: phospholipid-translocating ATPase activity	3.03E-03
54	GO:0004620: phospholipase activity	3.58E-03
55	GO:0008235: metalloexopeptidase activity	3.58E-03
56	GO:0008375: acetylglucosaminyltransferase activity	3.91E-03
57	GO:0004708: MAP kinase kinase activity	4.15E-03
58	GO:0052747: sinapyl alcohol dehydrogenase activity	4.15E-03
59	GO:0030246: carbohydrate binding	4.24E-03
60	GO:0008142: oxysterol binding	4.74E-03
61	GO:0005267: potassium channel activity	4.74E-03
62	GO:0005375: copper ion transmembrane transporter activity	4.74E-03
63	GO:0008417: fucosyltransferase activity	5.37E-03
64	GO:0071949: FAD binding	5.37E-03
65	GO:0004672: protein kinase activity	5.39E-03
66	GO:0047617: acyl-CoA hydrolase activity	6.03E-03
67	GO:0016844: strictosidine synthase activity	6.03E-03
68	GO:0015020: glucuronosyltransferase activity	6.71E-03
69	GO:0004713: protein tyrosine kinase activity	6.71E-03
70	GO:0004177: aminopeptidase activity	7.43E-03
71	GO:0000287: magnesium ion binding	7.96E-03
72	GO:0045551: cinnamyl-alcohol dehydrogenase activity	8.17E-03
73	GO:0004521: endoribonuclease activity	8.17E-03
74	GO:0019888: protein phosphatase regulator activity	8.93E-03
75	GO:0005388: calcium-transporting ATPase activity	8.93E-03
76	GO:0004970: ionotropic glutamate receptor activity	1.05E-02
77	GO:0005217: intracellular ligand-gated ion channel activity	1.05E-02
78	GO:0017025: TBP-class protein binding	1.05E-02
79	GO:0004725: protein tyrosine phosphatase activity	1.14E-02
80	GO:0005385: zinc ion transmembrane transporter activity	1.22E-02
81	GO:0043130: ubiquitin binding	1.22E-02
82	GO:0043424: protein histidine kinase binding	1.31E-02
83	GO:0008324: cation transmembrane transporter activity	1.31E-02
84	GO:0019706: protein-cysteine S-palmitoyltransferase activity	1.40E-02
85	GO:0036459: thiol-dependent ubiquitinyl hydrolase activity	1.40E-02
86	GO:0004707: MAP kinase activity	1.40E-02
87	GO:0016779: nucleotidyltransferase activity	1.50E-02
88	GO:0005451: monovalent cation:proton antiporter activity	1.89E-02
89	GO:0003713: transcription coactivator activity	1.99E-02
90	GO:0001085: RNA polymerase II transcription factor binding	1.99E-02
91	GO:0015299: solute:proton antiporter activity	2.10E-02
92	GO:0010181: FMN binding	2.10E-02
93	GO:0015144: carbohydrate transmembrane transporter activity	2.16E-02
94	GO:0004872: receptor activity	2.20E-02
95	GO:0004843: thiol-dependent ubiquitin-specific protease activity	2.31E-02
96	GO:0005351: sugar:proton symporter activity	2.43E-02
97	GO:0015385: sodium:proton antiporter activity	2.54E-02
98	GO:0008483: transaminase activity	2.77E-02
99	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	2.77E-02
100	GO:0016413: O-acetyltransferase activity	2.89E-02
101	GO:0051213: dioxygenase activity	3.01E-02
102	GO:0016887: ATPase activity	3.05E-02
103	GO:0005096: GTPase activator activity	3.76E-02
104	GO:0030145: manganese ion binding	4.03E-02
105	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	4.03E-02
106	GO:0003682: chromatin binding	4.07E-02
107	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	4.30E-02
108	GO:0000149: SNARE binding	4.57E-02
109	GO:0004497: monooxygenase activity	4.76E-02
110	GO:0003729: mRNA binding	4.99E-02
111	GO:0061630: ubiquitin protein ligase activity	5.00E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	6.30E-13
2	GO:0016021: integral component of membrane	3.76E-09
3	GO:0005789: endoplasmic reticulum membrane	3.07E-05
4	GO:0005794: Golgi apparatus	4.38E-05
5	GO:0005783: endoplasmic reticulum	5.01E-05
6	GO:0031902: late endosome membrane	1.05E-04
7	GO:0000138: Golgi trans cisterna	2.34E-04
8	GO:0042406: extrinsic component of endoplasmic reticulum membrane	8.44E-04
9	GO:0005829: cytosol	1.06E-03
10	GO:0070062: extracellular exosome	1.20E-03
11	GO:0016020: membrane	1.37E-03
12	GO:0005802: trans-Golgi network	1.59E-03
13	GO:0030140: trans-Golgi network transport vesicle	2.52E-03
14	GO:0031597: cytosolic proteasome complex	3.03E-03
15	GO:0000815: ESCRT III complex	3.03E-03
16	GO:0030173: integral component of Golgi membrane	3.03E-03
17	GO:0016363: nuclear matrix	3.03E-03
18	GO:0031595: nuclear proteasome complex	3.58E-03
19	GO:0012507: ER to Golgi transport vesicle membrane	4.15E-03
20	GO:0030131: clathrin adaptor complex	4.15E-03
21	GO:0008540: proteasome regulatory particle, base subcomplex	6.03E-03
22	GO:0030125: clathrin vesicle coat	6.71E-03
23	GO:0005795: Golgi stack	1.05E-02
24	GO:0030176: integral component of endoplasmic reticulum membrane	1.05E-02
25	GO:0005773: vacuole	1.06E-02
26	GO:0005769: early endosome	1.14E-02
27	GO:0005905: clathrin-coated pit	1.40E-02
28	GO:0005839: proteasome core complex	1.40E-02
29	GO:0012505: endomembrane system	1.40E-02
30	GO:0005741: mitochondrial outer membrane	1.40E-02
31	GO:0005770: late endosome	1.99E-02
32	GO:0005768: endosome	2.41E-02
33	GO:0000145: exocyst	2.42E-02
34	GO:0032580: Golgi cisterna membrane	2.65E-02
35	GO:0005778: peroxisomal membrane	2.77E-02
36	GO:0005667: transcription factor complex	3.25E-02
37	GO:0000151: ubiquitin ligase complex	3.63E-02
38	GO:0000325: plant-type vacuole	4.03E-02
39	GO:0000786: nucleosome	4.16E-02
40	GO:0000139: Golgi membrane	4.36E-02
41	GO:0031201: SNARE complex	4.85E-02