GO Enrichment Analysis of Co-expressed Genes with
AT1G24120
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 2 | GO:0035970: peptidyl-threonine dephosphorylation | 0.00E+00 |
| 3 | GO:0009773: photosynthetic electron transport in photosystem I | 6.48E-07 |
| 4 | GO:0032544: plastid translation | 2.84E-05 |
| 5 | GO:0071482: cellular response to light stimulus | 2.84E-05 |
| 6 | GO:0018298: protein-chromophore linkage | 3.39E-05 |
| 7 | GO:0010205: photoinhibition | 4.36E-05 |
| 8 | GO:1904966: positive regulation of vitamin E biosynthetic process | 5.48E-05 |
| 9 | GO:1904964: positive regulation of phytol biosynthetic process | 5.48E-05 |
| 10 | GO:0071588: hydrogen peroxide mediated signaling pathway | 5.48E-05 |
| 11 | GO:0009658: chloroplast organization | 6.50E-05 |
| 12 | GO:0015979: photosynthesis | 1.22E-04 |
| 13 | GO:0006636: unsaturated fatty acid biosynthetic process | 1.25E-04 |
| 14 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 1.34E-04 |
| 15 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 1.34E-04 |
| 16 | GO:0006000: fructose metabolic process | 2.28E-04 |
| 17 | GO:0042335: cuticle development | 2.70E-04 |
| 18 | GO:2001141: regulation of RNA biosynthetic process | 3.33E-04 |
| 19 | GO:0009765: photosynthesis, light harvesting | 4.45E-04 |
| 20 | GO:0010027: thylakoid membrane organization | 5.19E-04 |
| 21 | GO:0006564: L-serine biosynthetic process | 5.66E-04 |
| 22 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 6.92E-04 |
| 23 | GO:0010019: chloroplast-nucleus signaling pathway | 8.25E-04 |
| 24 | GO:0009645: response to low light intensity stimulus | 9.62E-04 |
| 25 | GO:0009395: phospholipid catabolic process | 9.62E-04 |
| 26 | GO:0010196: nonphotochemical quenching | 9.62E-04 |
| 27 | GO:0008610: lipid biosynthetic process | 1.11E-03 |
| 28 | GO:0009644: response to high light intensity | 1.15E-03 |
| 29 | GO:0006869: lipid transport | 1.22E-03 |
| 30 | GO:0006002: fructose 6-phosphate metabolic process | 1.26E-03 |
| 31 | GO:0042761: very long-chain fatty acid biosynthetic process | 1.58E-03 |
| 32 | GO:0055114: oxidation-reduction process | 1.92E-03 |
| 33 | GO:0019684: photosynthesis, light reaction | 1.93E-03 |
| 34 | GO:0009089: lysine biosynthetic process via diaminopimelate | 1.93E-03 |
| 35 | GO:0006352: DNA-templated transcription, initiation | 1.93E-03 |
| 36 | GO:0006415: translational termination | 1.93E-03 |
| 37 | GO:0006094: gluconeogenesis | 2.30E-03 |
| 38 | GO:0009767: photosynthetic electron transport chain | 2.30E-03 |
| 39 | GO:0005986: sucrose biosynthetic process | 2.30E-03 |
| 40 | GO:0010020: chloroplast fission | 2.49E-03 |
| 41 | GO:0019253: reductive pentose-phosphate cycle | 2.49E-03 |
| 42 | GO:0005985: sucrose metabolic process | 2.70E-03 |
| 43 | GO:0010025: wax biosynthetic process | 2.90E-03 |
| 44 | GO:0009768: photosynthesis, light harvesting in photosystem I | 3.32E-03 |
| 45 | GO:0031408: oxylipin biosynthetic process | 3.54E-03 |
| 46 | GO:0016226: iron-sulfur cluster assembly | 3.77E-03 |
| 47 | GO:0055085: transmembrane transport | 3.94E-03 |
| 48 | GO:0000302: response to reactive oxygen species | 5.74E-03 |
| 49 | GO:0071554: cell wall organization or biogenesis | 5.74E-03 |
| 50 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 6.76E-03 |
| 51 | GO:0071555: cell wall organization | 7.12E-03 |
| 52 | GO:0030244: cellulose biosynthetic process | 8.91E-03 |
| 53 | GO:0006629: lipid metabolic process | 9.65E-03 |
| 54 | GO:0009631: cold acclimation | 9.86E-03 |
| 55 | GO:0009409: response to cold | 1.05E-02 |
| 56 | GO:0009637: response to blue light | 1.05E-02 |
| 57 | GO:0034599: cellular response to oxidative stress | 1.09E-02 |
| 58 | GO:0006810: transport | 1.16E-02 |
| 59 | GO:0010114: response to red light | 1.26E-02 |
| 60 | GO:0009664: plant-type cell wall organization | 1.48E-02 |
| 61 | GO:0006096: glycolytic process | 1.75E-02 |
| 62 | GO:0006457: protein folding | 2.23E-02 |
| 63 | GO:0042744: hydrogen peroxide catabolic process | 2.57E-02 |
| 64 | GO:0006633: fatty acid biosynthetic process | 2.75E-02 |
| 65 | GO:0040008: regulation of growth | 2.85E-02 |
| 66 | GO:0007623: circadian rhythm | 2.94E-02 |
| 67 | GO:0009451: RNA modification | 2.99E-02 |
| 68 | GO:0009826: unidimensional cell growth | 3.91E-02 |
| 69 | GO:0042254: ribosome biogenesis | 4.07E-02 |
| 70 | GO:0007049: cell cycle | 4.34E-02 |
| 71 | GO:0080167: response to karrikin | 4.68E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity | 0.00E+00 |
| 2 | GO:0016168: chlorophyll binding | 2.42E-05 |
| 3 | GO:0009496: plastoquinol--plastocyanin reductase activity | 5.48E-05 |
| 4 | GO:0046028: electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity | 5.48E-05 |
| 5 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 5.48E-05 |
| 6 | GO:0045485: omega-6 fatty acid desaturase activity | 5.48E-05 |
| 7 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 1.34E-04 |
| 8 | GO:0004617: phosphoglycerate dehydrogenase activity | 1.34E-04 |
| 9 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 1.34E-04 |
| 10 | GO:0022891: substrate-specific transmembrane transporter activity | 2.10E-04 |
| 11 | GO:0045158: electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity | 2.28E-04 |
| 12 | GO:0008289: lipid binding | 3.27E-04 |
| 13 | GO:0016149: translation release factor activity, codon specific | 3.33E-04 |
| 14 | GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity | 3.33E-04 |
| 15 | GO:0016491: oxidoreductase activity | 4.16E-04 |
| 16 | GO:0001053: plastid sigma factor activity | 4.45E-04 |
| 17 | GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity | 4.45E-04 |
| 18 | GO:0016987: sigma factor activity | 4.45E-04 |
| 19 | GO:0052793: pectin acetylesterase activity | 4.45E-04 |
| 20 | GO:0043495: protein anchor | 4.45E-04 |
| 21 | GO:0004040: amidase activity | 5.66E-04 |
| 22 | GO:0016688: L-ascorbate peroxidase activity | 6.92E-04 |
| 23 | GO:0004130: cytochrome-c peroxidase activity | 6.92E-04 |
| 24 | GO:0051920: peroxiredoxin activity | 8.25E-04 |
| 25 | GO:0019899: enzyme binding | 9.62E-04 |
| 26 | GO:0004620: phospholipase activity | 9.62E-04 |
| 27 | GO:0016787: hydrolase activity | 9.80E-04 |
| 28 | GO:0016209: antioxidant activity | 1.11E-03 |
| 29 | GO:0004033: aldo-keto reductase (NADP) activity | 1.11E-03 |
| 30 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.24E-03 |
| 31 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 1.26E-03 |
| 32 | GO:0003747: translation release factor activity | 1.41E-03 |
| 33 | GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors | 1.41E-03 |
| 34 | GO:0047372: acylglycerol lipase activity | 1.93E-03 |
| 35 | GO:0031072: heat shock protein binding | 2.30E-03 |
| 36 | GO:0009982: pseudouridine synthase activity | 2.30E-03 |
| 37 | GO:0004565: beta-galactosidase activity | 2.30E-03 |
| 38 | GO:0019843: rRNA binding | 2.49E-03 |
| 39 | GO:0031409: pigment binding | 2.90E-03 |
| 40 | GO:0046872: metal ion binding | 3.03E-03 |
| 41 | GO:0051536: iron-sulfur cluster binding | 3.11E-03 |
| 42 | GO:0005528: FK506 binding | 3.11E-03 |
| 43 | GO:0042802: identical protein binding | 4.34E-03 |
| 44 | GO:0016413: O-acetyltransferase activity | 7.11E-03 |
| 45 | GO:0016597: amino acid binding | 7.11E-03 |
| 46 | GO:0052689: carboxylic ester hydrolase activity | 7.22E-03 |
| 47 | GO:0004721: phosphoprotein phosphatase activity | 8.29E-03 |
| 48 | GO:0003993: acid phosphatase activity | 1.09E-02 |
| 49 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.33E-02 |
| 50 | GO:0005198: structural molecule activity | 1.37E-02 |
| 51 | GO:0051287: NAD binding | 1.44E-02 |
| 52 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.55E-02 |
| 53 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 1.79E-02 |
| 54 | GO:0051082: unfolded protein binding | 1.99E-02 |
| 55 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 3.49E-02 |
| 56 | GO:0005215: transporter activity | 3.85E-02 |
| 57 | GO:0004601: peroxidase activity | 4.01E-02 |
| 58 | GO:0016788: hydrolase activity, acting on ester bonds | 4.07E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 6.09E-20 |
| 2 | GO:0009570: chloroplast stroma | 1.10E-11 |
| 3 | GO:0009941: chloroplast envelope | 1.86E-11 |
| 4 | GO:0009535: chloroplast thylakoid membrane | 1.16E-09 |
| 5 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 3.56E-05 |
| 6 | GO:0009782: photosystem I antenna complex | 5.48E-05 |
| 7 | GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex | 5.48E-05 |
| 8 | GO:0009534: chloroplast thylakoid | 8.77E-05 |
| 9 | GO:0042651: thylakoid membrane | 1.57E-04 |
| 10 | GO:0009523: photosystem II | 3.37E-04 |
| 11 | GO:0009512: cytochrome b6f complex | 5.66E-04 |
| 12 | GO:0009579: thylakoid | 6.28E-04 |
| 13 | GO:0009533: chloroplast stromal thylakoid | 9.62E-04 |
| 14 | GO:0009706: chloroplast inner membrane | 2.00E-03 |
| 15 | GO:0010287: plastoglobule | 2.37E-03 |
| 16 | GO:0009543: chloroplast thylakoid lumen | 2.49E-03 |
| 17 | GO:0030076: light-harvesting complex | 2.70E-03 |
| 18 | GO:0009532: plastid stroma | 3.54E-03 |
| 19 | GO:0046658: anchored component of plasma membrane | 4.52E-03 |
| 20 | GO:0031225: anchored component of membrane | 5.11E-03 |
| 21 | GO:0031969: chloroplast membrane | 6.54E-03 |
| 22 | GO:0010319: stromule | 6.83E-03 |
| 23 | GO:0009536: plastid | 9.23E-03 |
| 24 | GO:0015934: large ribosomal subunit | 9.86E-03 |
| 25 | GO:0031977: thylakoid lumen | 1.19E-02 |
| 26 | GO:0016020: membrane | 1.95E-02 |
| 27 | GO:0016021: integral component of membrane | 2.63E-02 |
| 28 | GO:0048046: apoplast | 3.62E-02 |
| 29 | GO:0005840: ribosome | 3.65E-02 |
| 30 | GO:0009505: plant-type cell wall | 4.35E-02 |
| 31 | GO:0005874: microtubule | 4.56E-02 |