co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G23830

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0048219: inter-Golgi cisterna vesicle-mediated transport	0.00E+00
2	GO:0010401: pectic galactan metabolic process	0.00E+00
3	GO:0010499: proteasomal ubiquitin-independent protein catabolic process	0.00E+00
4	GO:0051553: flavone biosynthetic process	0.00E+00
5	GO:0009620: response to fungus	8.88E-06
6	GO:0008219: cell death	3.79E-05
7	GO:0006468: protein phosphorylation	4.68E-05
8	GO:0017183: peptidyl-diphthamide biosynthetic process from peptidyl-histidine	5.79E-05
9	GO:0016337: single organismal cell-cell adhesion	5.79E-05
10	GO:0002143: tRNA wobble position uridine thiolation	5.79E-05
11	GO:0010200: response to chitin	1.16E-04
12	GO:0006024: glycosaminoglycan biosynthetic process	1.41E-04
13	GO:0052541: plant-type cell wall cellulose metabolic process	1.41E-04
14	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	1.41E-04
15	GO:0015012: heparan sulfate proteoglycan biosynthetic process	1.41E-04
16	GO:0009751: response to salicylic acid	2.09E-04
17	GO:0010227: floral organ abscission	2.26E-04
18	GO:0006517: protein deglycosylation	2.40E-04
19	GO:0010498: proteasomal protein catabolic process	2.40E-04
20	GO:1900055: regulation of leaf senescence	2.40E-04
21	GO:1900140: regulation of seedling development	2.40E-04
22	GO:0048194: Golgi vesicle budding	3.49E-04
23	GO:0002239: response to oomycetes	3.49E-04
24	GO:0072583: clathrin-dependent endocytosis	3.49E-04
25	GO:0002679: respiratory burst involved in defense response	3.49E-04
26	GO:0000187: activation of MAPK activity	3.49E-04
27	GO:0010150: leaf senescence	4.24E-04
28	GO:0060548: negative regulation of cell death	4.66E-04
29	GO:2000038: regulation of stomatal complex development	4.66E-04
30	GO:0006665: sphingolipid metabolic process	5.92E-04
31	GO:0006777: Mo-molybdopterin cofactor biosynthetic process	7.24E-04
32	GO:1900425: negative regulation of defense response to bacterium	7.24E-04
33	GO:2000037: regulation of stomatal complex patterning	8.63E-04
34	GO:0043090: amino acid import	1.01E-03
35	GO:0071446: cellular response to salicylic acid stimulus	1.01E-03
36	GO:0006491: N-glycan processing	1.16E-03
37	GO:1900150: regulation of defense response to fungus	1.16E-03
38	GO:2000031: regulation of salicylic acid mediated signaling pathway	1.32E-03
39	GO:0006002: fructose 6-phosphate metabolic process	1.32E-03
40	GO:0006075: (1->3)-beta-D-glucan biosynthetic process	1.32E-03
41	GO:0031347: regulation of defense response	1.37E-03
42	GO:0009821: alkaloid biosynthetic process	1.48E-03
43	GO:0051865: protein autoubiquitination	1.48E-03
44	GO:0006995: cellular response to nitrogen starvation	1.83E-03
45	GO:0019684: photosynthesis, light reaction	2.02E-03
46	GO:0055046: microgametogenesis	2.41E-03
47	GO:0010102: lateral root morphogenesis	2.41E-03
48	GO:0010229: inflorescence development	2.41E-03
49	GO:0002237: response to molecule of bacterial origin	2.62E-03
50	GO:0010053: root epidermal cell differentiation	2.82E-03
51	GO:2000377: regulation of reactive oxygen species metabolic process	3.26E-03
52	GO:0006874: cellular calcium ion homeostasis	3.49E-03
53	GO:0009814: defense response, incompatible interaction	3.95E-03
54	GO:0031348: negative regulation of defense response	3.95E-03
55	GO:0006012: galactose metabolic process	4.20E-03
56	GO:0009561: megagametogenesis	4.44E-03
57	GO:0010087: phloem or xylem histogenesis	4.95E-03
58	GO:0008360: regulation of cell shape	5.21E-03
59	GO:0010197: polar nucleus fusion	5.21E-03
60	GO:0048544: recognition of pollen	5.48E-03
61	GO:0010183: pollen tube guidance	5.75E-03
62	GO:0009749: response to glucose	5.75E-03
63	GO:0002229: defense response to oomycetes	6.02E-03
64	GO:0000302: response to reactive oxygen species	6.02E-03
65	GO:0030163: protein catabolic process	6.59E-03
66	GO:0010252: auxin homeostasis	6.88E-03
67	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	7.26E-03
68	GO:0046777: protein autophosphorylation	7.50E-03
69	GO:0009615: response to virus	7.78E-03
70	GO:0042742: defense response to bacterium	7.80E-03
71	GO:0009607: response to biotic stimulus	8.08E-03
72	GO:0009627: systemic acquired resistance	8.40E-03
73	GO:0009817: defense response to fungus, incompatible interaction	9.36E-03
74	GO:0009813: flavonoid biosynthetic process	9.69E-03
75	GO:0006499: N-terminal protein myristoylation	1.00E-02
76	GO:0010119: regulation of stomatal movement	1.04E-02
77	GO:0006865: amino acid transport	1.07E-02
78	GO:0006099: tricarboxylic acid cycle	1.14E-02
79	GO:0009744: response to sucrose	1.32E-02
80	GO:0000209: protein polyubiquitination	1.36E-02
81	GO:0008643: carbohydrate transport	1.40E-02
82	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	1.51E-02
83	GO:0000165: MAPK cascade	1.51E-02
84	GO:0006486: protein glycosylation	1.63E-02
85	GO:0006417: regulation of translation	1.75E-02
86	GO:0009738: abscisic acid-activated signaling pathway	1.79E-02
87	GO:0006096: glycolytic process	1.84E-02
88	GO:0009626: plant-type hypersensitive response	1.92E-02
89	GO:0006952: defense response	2.05E-02
90	GO:0051726: regulation of cell cycle	2.19E-02
91	GO:0009742: brassinosteroid mediated signaling pathway	2.19E-02
92	GO:0009058: biosynthetic process	2.55E-02
93	GO:0045490: pectin catabolic process	3.09E-02
94	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	3.35E-02
95	GO:0007166: cell surface receptor signaling pathway	3.40E-02
96	GO:0010468: regulation of gene expression	3.51E-02
97	GO:0009617: response to bacterium	3.51E-02
98	GO:0009723: response to ethylene	4.68E-02
99	GO:0080167: response to karrikin	4.92E-02

Rank	GO Term	Adjusted P value
1	GO:0033759: flavone synthase activity	0.00E+00
2	GO:0015370: solute:sodium symporter activity	0.00E+00
3	GO:0061604: molybdopterin-synthase sulfurtransferase activity	0.00E+00
4	GO:0004164: diphthine synthase activity	0.00E+00
5	GO:0070577: lysine-acetylated histone binding	0.00E+00
6	GO:0061605: molybdopterin-synthase adenylyltransferase activity	0.00E+00
7	GO:0016504: peptidase activator activity	0.00E+00
8	GO:0005524: ATP binding	7.39E-06
9	GO:0004012: phospholipid-translocating ATPase activity	1.32E-05
10	GO:0004714: transmembrane receptor protein tyrosine kinase activity	2.41E-05
11	GO:0032050: clathrin heavy chain binding	5.79E-05
12	GO:0033925: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity	5.79E-05
13	GO:0019707: protein-cysteine S-acyltransferase activity	5.79E-05
14	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	5.79E-05
15	GO:0004674: protein serine/threonine kinase activity	6.27E-05
16	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	9.21E-05
17	GO:0004190: aspartic-type endopeptidase activity	1.20E-04
18	GO:0008265: Mo-molybdopterin cofactor sulfurase activity	2.40E-04
19	GO:0004792: thiosulfate sulfurtransferase activity	3.49E-04
20	GO:0070628: proteasome binding	4.66E-04
21	GO:0015204: urea transmembrane transporter activity	4.66E-04
22	GO:0016301: kinase activity	4.92E-04
23	GO:0004672: protein kinase activity	5.75E-04
24	GO:0008641: small protein activating enzyme activity	5.92E-04
25	GO:0003872: 6-phosphofructokinase activity	1.01E-03
26	GO:0004034: aldose 1-epimerase activity	1.16E-03
27	GO:0004708: MAP kinase kinase activity	1.16E-03
28	GO:0015293: symporter activity	1.28E-03
29	GO:0003843: 1,3-beta-D-glucan synthase activity	1.32E-03
30	GO:0016844: strictosidine synthase activity	1.65E-03
31	GO:0005217: intracellular ligand-gated ion channel activity	2.82E-03
32	GO:0004970: ionotropic glutamate receptor activity	2.82E-03
33	GO:0003954: NADH dehydrogenase activity	3.26E-03
34	GO:0019706: protein-cysteine S-palmitoyltransferase activity	3.72E-03
35	GO:0008408: 3'-5' exonuclease activity	3.72E-03
36	GO:0035251: UDP-glucosyltransferase activity	3.72E-03
37	GO:0033612: receptor serine/threonine kinase binding	3.72E-03
38	GO:0008514: organic anion transmembrane transporter activity	4.44E-03
39	GO:0030246: carbohydrate binding	4.64E-03
40	GO:0004527: exonuclease activity	5.21E-03
41	GO:0016853: isomerase activity	5.48E-03
42	GO:0000287: magnesium ion binding	5.56E-03
43	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	7.18E-03
44	GO:0016798: hydrolase activity, acting on glycosyl bonds	8.71E-03
45	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.11E-02
46	GO:0005198: structural molecule activity	1.44E-02
47	GO:0015171: amino acid transmembrane transporter activity	1.75E-02
48	GO:0016746: transferase activity, transferring acyl groups	2.14E-02
49	GO:0046872: metal ion binding	2.47E-02
50	GO:0005516: calmodulin binding	2.78E-02
51	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	2.94E-02
52	GO:0008168: methyltransferase activity	4.11E-02
53	GO:0016788: hydrolase activity, acting on ester bonds	4.28E-02
54	GO:0003676: nucleic acid binding	4.60E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	5.60E-06
2	GO:0045252: oxoglutarate dehydrogenase complex	5.79E-05
3	GO:0000138: Golgi trans cisterna	5.79E-05
4	GO:0031304: intrinsic component of mitochondrial inner membrane	1.41E-04
5	GO:0005802: trans-Golgi network	1.82E-04
6	GO:0016021: integral component of membrane	2.26E-04
7	GO:0005945: 6-phosphofructokinase complex	5.92E-04
8	GO:0005798: Golgi-associated vesicle	7.24E-04
9	GO:0000148: 1,3-beta-D-glucan synthase complex	1.32E-03
10	GO:0030125: clathrin vesicle coat	1.83E-03
11	GO:0005795: Golgi stack	2.82E-03
12	GO:0005769: early endosome	3.04E-03
13	GO:0005839: proteasome core complex	3.72E-03
14	GO:0019898: extrinsic component of membrane	5.75E-03
15	GO:0009504: cell plate	5.75E-03
16	GO:0016020: membrane	9.50E-03
17	GO:0090406: pollen tube	1.32E-02
18	GO:0009543: chloroplast thylakoid lumen	2.46E-02
19	GO:0005768: endosome	3.36E-02
20	GO:0005794: Golgi apparatus	4.31E-02
21	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	4.51E-02