GO Enrichment Analysis of Co-expressed Genes with
AT1G23740
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process | 0.00E+00 |
| 2 | GO:0098586: cellular response to virus | 0.00E+00 |
| 3 | GO:0017009: protein-phycocyanobilin linkage | 0.00E+00 |
| 4 | GO:0046838: phosphorylated carbohydrate dephosphorylation | 0.00E+00 |
| 5 | GO:0010021: amylopectin biosynthetic process | 4.03E-06 |
| 6 | GO:0010304: PSII associated light-harvesting complex II catabolic process | 1.04E-05 |
| 7 | GO:0019252: starch biosynthetic process | 1.42E-05 |
| 8 | GO:0030091: protein repair | 2.73E-05 |
| 9 | GO:0000373: Group II intron splicing | 4.35E-05 |
| 10 | GO:0010206: photosystem II repair | 4.35E-05 |
| 11 | GO:0010205: photoinhibition | 5.35E-05 |
| 12 | GO:0051775: response to redox state | 6.26E-05 |
| 13 | GO:0009773: photosynthetic electron transport in photosystem I | 7.62E-05 |
| 14 | GO:0009644: response to high light intensity | 1.06E-04 |
| 15 | GO:0010020: chloroplast fission | 1.18E-04 |
| 16 | GO:0016122: xanthophyll metabolic process | 1.52E-04 |
| 17 | GO:0046741: transport of virus in host, tissue to tissue | 1.52E-04 |
| 18 | GO:0009915: phloem sucrose loading | 1.52E-04 |
| 19 | GO:0080005: photosystem stoichiometry adjustment | 1.52E-04 |
| 20 | GO:0015979: photosynthesis | 1.65E-04 |
| 21 | GO:0016050: vesicle organization | 2.57E-04 |
| 22 | GO:0006662: glycerol ether metabolic process | 3.47E-04 |
| 23 | GO:0043572: plastid fission | 3.73E-04 |
| 24 | GO:0006020: inositol metabolic process | 3.73E-04 |
| 25 | GO:0071484: cellular response to light intensity | 3.73E-04 |
| 26 | GO:0006107: oxaloacetate metabolic process | 3.73E-04 |
| 27 | GO:0006021: inositol biosynthetic process | 4.99E-04 |
| 28 | GO:0006734: NADH metabolic process | 4.99E-04 |
| 29 | GO:0006109: regulation of carbohydrate metabolic process | 4.99E-04 |
| 30 | GO:0015994: chlorophyll metabolic process | 4.99E-04 |
| 31 | GO:0016126: sterol biosynthetic process | 6.12E-04 |
| 32 | GO:0010117: photoprotection | 6.32E-04 |
| 33 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 7.73E-04 |
| 34 | GO:0046855: inositol phosphate dephosphorylation | 7.73E-04 |
| 35 | GO:0010190: cytochrome b6f complex assembly | 7.73E-04 |
| 36 | GO:0010189: vitamin E biosynthetic process | 9.20E-04 |
| 37 | GO:0034599: cellular response to oxidative stress | 1.03E-03 |
| 38 | GO:0009645: response to low light intensity stimulus | 1.07E-03 |
| 39 | GO:0009395: phospholipid catabolic process | 1.07E-03 |
| 40 | GO:0055114: oxidation-reduction process | 1.10E-03 |
| 41 | GO:0016559: peroxisome fission | 1.24E-03 |
| 42 | GO:0048564: photosystem I assembly | 1.24E-03 |
| 43 | GO:0005978: glycogen biosynthetic process | 1.24E-03 |
| 44 | GO:0009642: response to light intensity | 1.24E-03 |
| 45 | GO:0006098: pentose-phosphate shunt | 1.58E-03 |
| 46 | GO:0034765: regulation of ion transmembrane transport | 1.58E-03 |
| 47 | GO:0005982: starch metabolic process | 1.77E-03 |
| 48 | GO:0008152: metabolic process | 1.99E-03 |
| 49 | GO:0043085: positive regulation of catalytic activity | 2.17E-03 |
| 50 | GO:0006790: sulfur compound metabolic process | 2.37E-03 |
| 51 | GO:0005983: starch catabolic process | 2.37E-03 |
| 52 | GO:0006108: malate metabolic process | 2.58E-03 |
| 53 | GO:0006094: gluconeogenesis | 2.58E-03 |
| 54 | GO:0009266: response to temperature stimulus | 2.80E-03 |
| 55 | GO:0046854: phosphatidylinositol phosphorylation | 3.03E-03 |
| 56 | GO:0009768: photosynthesis, light harvesting in photosystem I | 3.74E-03 |
| 57 | GO:0051302: regulation of cell division | 3.74E-03 |
| 58 | GO:0008299: isoprenoid biosynthetic process | 3.74E-03 |
| 59 | GO:0007017: microtubule-based process | 3.74E-03 |
| 60 | GO:0007623: circadian rhythm | 4.06E-03 |
| 61 | GO:0016226: iron-sulfur cluster assembly | 4.24E-03 |
| 62 | GO:0042391: regulation of membrane potential | 5.31E-03 |
| 63 | GO:0048544: recognition of pollen | 5.88E-03 |
| 64 | GO:0000302: response to reactive oxygen species | 6.46E-03 |
| 65 | GO:0030163: protein catabolic process | 7.07E-03 |
| 66 | GO:0071805: potassium ion transmembrane transport | 7.70E-03 |
| 67 | GO:0010027: thylakoid membrane organization | 8.35E-03 |
| 68 | GO:0006979: response to oxidative stress | 8.97E-03 |
| 69 | GO:0042128: nitrate assimilation | 9.01E-03 |
| 70 | GO:0045454: cell redox homeostasis | 9.31E-03 |
| 71 | GO:0018298: protein-chromophore linkage | 1.01E-02 |
| 72 | GO:0000160: phosphorelay signal transduction system | 1.04E-02 |
| 73 | GO:0006099: tricarboxylic acid cycle | 1.23E-02 |
| 74 | GO:0006631: fatty acid metabolic process | 1.34E-02 |
| 75 | GO:0006855: drug transmembrane transport | 1.58E-02 |
| 76 | GO:0031347: regulation of defense response | 1.63E-02 |
| 77 | GO:0009736: cytokinin-activated signaling pathway | 1.75E-02 |
| 78 | GO:0006857: oligopeptide transport | 1.84E-02 |
| 79 | GO:0009735: response to cytokinin | 1.87E-02 |
| 80 | GO:0006096: glycolytic process | 1.98E-02 |
| 81 | GO:0043086: negative regulation of catalytic activity | 1.98E-02 |
| 82 | GO:0007275: multicellular organism development | 2.09E-02 |
| 83 | GO:0009611: response to wounding | 2.09E-02 |
| 84 | GO:0006508: proteolysis | 3.65E-02 |
| 85 | GO:0007166: cell surface receptor signaling pathway | 3.66E-02 |
| 86 | GO:0006470: protein dephosphorylation | 3.66E-02 |
| 87 | GO:0010468: regulation of gene expression | 3.77E-02 |
| 88 | GO:0009658: chloroplast organization | 4.54E-02 |
| 89 | GO:0007049: cell cycle | 4.91E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046554: malate dehydrogenase (NADP+) activity | 0.00E+00 |
| 2 | GO:0009976: tocopherol cyclase activity | 0.00E+00 |
| 3 | GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors | 0.00E+00 |
| 4 | GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity | 0.00E+00 |
| 5 | GO:0004506: squalene monooxygenase activity | 4.03E-06 |
| 6 | GO:0009011: starch synthase activity | 4.03E-06 |
| 7 | GO:0004176: ATP-dependent peptidase activity | 4.68E-06 |
| 8 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 1.50E-05 |
| 9 | GO:0008746: NAD(P)+ transhydrogenase activity | 6.26E-05 |
| 10 | GO:0004328: formamidase activity | 6.26E-05 |
| 11 | GO:0050139: nicotinate-N-glucosyltransferase activity | 6.26E-05 |
| 12 | GO:0050308: sugar-phosphatase activity | 6.26E-05 |
| 13 | GO:0019203: carbohydrate phosphatase activity | 6.26E-05 |
| 14 | GO:0052832: inositol monophosphate 3-phosphatase activity | 1.52E-04 |
| 15 | GO:0033201: alpha-1,4-glucan synthase activity | 1.52E-04 |
| 16 | GO:0008934: inositol monophosphate 1-phosphatase activity | 1.52E-04 |
| 17 | GO:0052833: inositol monophosphate 4-phosphatase activity | 1.52E-04 |
| 18 | GO:0003844: 1,4-alpha-glucan branching enzyme activity | 1.52E-04 |
| 19 | GO:0070402: NADPH binding | 2.57E-04 |
| 20 | GO:0043169: cation binding | 2.57E-04 |
| 21 | GO:0004373: glycogen (starch) synthase activity | 2.57E-04 |
| 22 | GO:0008253: 5'-nucleotidase activity | 2.57E-04 |
| 23 | GO:0047134: protein-disulfide reductase activity | 2.97E-04 |
| 24 | GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 3.73E-04 |
| 25 | GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity | 3.73E-04 |
| 26 | GO:0004791: thioredoxin-disulfide reductase activity | 3.73E-04 |
| 27 | GO:0016853: isomerase activity | 3.73E-04 |
| 28 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 4.86E-04 |
| 29 | GO:0008237: metallopeptidase activity | 5.47E-04 |
| 30 | GO:0042802: identical protein binding | 6.53E-04 |
| 31 | GO:0016615: malate dehydrogenase activity | 7.73E-04 |
| 32 | GO:2001070: starch binding | 7.73E-04 |
| 33 | GO:0004332: fructose-bisphosphate aldolase activity | 7.73E-04 |
| 34 | GO:0042578: phosphoric ester hydrolase activity | 7.73E-04 |
| 35 | GO:0004222: metalloendopeptidase activity | 8.67E-04 |
| 36 | GO:0005242: inward rectifier potassium channel activity | 9.20E-04 |
| 37 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 9.20E-04 |
| 38 | GO:0030060: L-malate dehydrogenase activity | 9.20E-04 |
| 39 | GO:0102425: myricetin 3-O-glucosyltransferase activity | 1.07E-03 |
| 40 | GO:0102360: daphnetin 3-O-glucosyltransferase activity | 1.07E-03 |
| 41 | GO:0047893: flavonol 3-O-glucosyltransferase activity | 1.24E-03 |
| 42 | GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors | 1.58E-03 |
| 43 | GO:0008138: protein tyrosine/serine/threonine phosphatase activity | 1.58E-03 |
| 44 | GO:0008047: enzyme activator activity | 1.96E-03 |
| 45 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 2.17E-03 |
| 46 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 2.17E-03 |
| 47 | GO:0015035: protein disulfide oxidoreductase activity | 2.44E-03 |
| 48 | GO:0016491: oxidoreductase activity | 2.73E-03 |
| 49 | GO:0031409: pigment binding | 3.26E-03 |
| 50 | GO:0051536: iron-sulfur cluster binding | 3.49E-03 |
| 51 | GO:0004857: enzyme inhibitor activity | 3.49E-03 |
| 52 | GO:0035251: UDP-glucosyltransferase activity | 3.98E-03 |
| 53 | GO:0046872: metal ion binding | 4.82E-03 |
| 54 | GO:0005249: voltage-gated potassium channel activity | 5.31E-03 |
| 55 | GO:0030551: cyclic nucleotide binding | 5.31E-03 |
| 56 | GO:0048038: quinone binding | 6.46E-03 |
| 57 | GO:0000156: phosphorelay response regulator activity | 7.07E-03 |
| 58 | GO:0050660: flavin adenine dinucleotide binding | 7.25E-03 |
| 59 | GO:0016168: chlorophyll binding | 8.68E-03 |
| 60 | GO:0015238: drug transmembrane transporter activity | 1.04E-02 |
| 61 | GO:0030145: manganese ion binding | 1.11E-02 |
| 62 | GO:0016757: transferase activity, transferring glycosyl groups | 1.15E-02 |
| 63 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 1.19E-02 |
| 64 | GO:0003993: acid phosphatase activity | 1.23E-02 |
| 65 | GO:0015293: symporter activity | 1.54E-02 |
| 66 | GO:0016887: ATPase activity | 1.79E-02 |
| 67 | GO:0003777: microtubule motor activity | 1.89E-02 |
| 68 | GO:0016787: hydrolase activity | 2.33E-02 |
| 69 | GO:0016829: lyase activity | 2.80E-02 |
| 70 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 3.17E-02 |
| 71 | GO:0015297: antiporter activity | 3.22E-02 |
| 72 | GO:0008017: microtubule binding | 3.44E-02 |
| 73 | GO:0008194: UDP-glycosyltransferase activity | 3.60E-02 |
| 74 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 3.95E-02 |
| 75 | GO:0005215: transporter activity | 4.56E-02 |
| 76 | GO:0016788: hydrolase activity, acting on ester bonds | 4.60E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009575: chromoplast stroma | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 3.57E-21 |
| 3 | GO:0009534: chloroplast thylakoid | 8.40E-14 |
| 4 | GO:0009570: chloroplast stroma | 1.86E-13 |
| 5 | GO:0009535: chloroplast thylakoid membrane | 9.96E-12 |
| 6 | GO:0009941: chloroplast envelope | 9.00E-10 |
| 7 | GO:0009579: thylakoid | 7.97E-07 |
| 8 | GO:0031977: thylakoid lumen | 2.78E-06 |
| 9 | GO:0010287: plastoglobule | 1.89E-05 |
| 10 | GO:0009501: amyloplast | 2.73E-05 |
| 11 | GO:0009782: photosystem I antenna complex | 6.26E-05 |
| 12 | GO:0030286: dynein complex | 4.99E-04 |
| 13 | GO:0009707: chloroplast outer membrane | 7.90E-04 |
| 14 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.58E-03 |
| 15 | GO:0009706: chloroplast inner membrane | 2.37E-03 |
| 16 | GO:0009508: plastid chromosome | 2.58E-03 |
| 17 | GO:0030076: light-harvesting complex | 3.03E-03 |
| 18 | GO:0005875: microtubule associated complex | 3.26E-03 |
| 19 | GO:0009654: photosystem II oxygen evolving complex | 3.74E-03 |
| 20 | GO:0019898: extrinsic component of membrane | 6.17E-03 |
| 21 | GO:0009295: nucleoid | 7.70E-03 |
| 22 | GO:0031969: chloroplast membrane | 7.77E-03 |
| 23 | GO:0030529: intracellular ribonucleoprotein complex | 8.35E-03 |
| 24 | GO:0043231: intracellular membrane-bounded organelle | 1.27E-02 |
| 25 | GO:0009543: chloroplast thylakoid lumen | 2.65E-02 |
| 26 | GO:0005623: cell | 2.70E-02 |
| 27 | GO:0016021: integral component of membrane | 2.74E-02 |