Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G22770

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1903428: positive regulation of reactive oxygen species biosynthetic process0.00E+00
2GO:0009768: photosynthesis, light harvesting in photosystem I7.41E-13
3GO:0018298: protein-chromophore linkage1.09E-10
4GO:0009645: response to low light intensity stimulus7.42E-08
5GO:0009769: photosynthesis, light harvesting in photosystem II7.42E-08
6GO:0009409: response to cold4.50E-07
7GO:0010218: response to far red light8.72E-07
8GO:0010114: response to red light2.10E-06
9GO:0009644: response to high light intensity2.50E-06
10GO:0000380: alternative mRNA splicing, via spliceosome5.18E-06
11GO:0015979: photosynthesis7.59E-06
12GO:0015812: gamma-aminobutyric acid transport5.34E-05
13GO:0032958: inositol phosphate biosynthetic process5.34E-05
14GO:1990641: response to iron ion starvation5.34E-05
15GO:0009416: response to light stimulus5.37E-05
16GO:0051170: nuclear import1.30E-04
17GO:0006101: citrate metabolic process1.30E-04
18GO:0048511: rhythmic process1.67E-04
19GO:0010017: red or far-red light signaling pathway1.84E-04
20GO:0006598: polyamine catabolic process2.22E-04
21GO:0006020: inositol metabolic process3.25E-04
22GO:0010601: positive regulation of auxin biosynthetic process3.25E-04
23GO:0007623: circadian rhythm3.69E-04
24GO:0009765: photosynthesis, light harvesting4.35E-04
25GO:0010600: regulation of auxin biosynthetic process4.35E-04
26GO:0030104: water homeostasis4.35E-04
27GO:0009635: response to herbicide6.76E-04
28GO:0000160: phosphorelay signal transduction system6.77E-04
29GO:0010043: response to zinc ion7.44E-04
30GO:0010119: regulation of stomatal movement7.44E-04
31GO:0009861: jasmonic acid and ethylene-dependent systemic resistance8.05E-04
32GO:0010244: response to low fluence blue light stimulus by blue low-fluence system8.05E-04
33GO:0009637: response to blue light8.11E-04
34GO:0045087: innate immune response8.11E-04
35GO:0009737: response to abscisic acid9.10E-04
36GO:0010161: red light signaling pathway9.40E-04
37GO:1900056: negative regulation of leaf senescence9.40E-04
38GO:0048437: floral organ development9.40E-04
39GO:0042542: response to hydrogen peroxide9.92E-04
40GO:0009415: response to water1.08E-03
41GO:0009704: de-etiolation1.08E-03
42GO:0032508: DNA duplex unwinding1.08E-03
43GO:0006102: isocitrate metabolic process1.08E-03
44GO:0010928: regulation of auxin mediated signaling pathway1.08E-03
45GO:0008643: carbohydrate transport1.11E-03
46GO:0010099: regulation of photomorphogenesis1.23E-03
47GO:0009827: plant-type cell wall modification1.23E-03
48GO:0090333: regulation of stomatal closure1.38E-03
49GO:0048354: mucilage biosynthetic process involved in seed coat development1.54E-03
50GO:0010380: regulation of chlorophyll biosynthetic process1.54E-03
51GO:0009641: shade avoidance1.71E-03
52GO:0009970: cellular response to sulfate starvation1.71E-03
53GO:0006995: cellular response to nitrogen starvation1.71E-03
54GO:0055062: phosphate ion homeostasis1.71E-03
55GO:0009718: anthocyanin-containing compound biosynthetic process2.25E-03
56GO:0009266: response to temperature stimulus2.43E-03
57GO:0009735: response to cytokinin2.49E-03
58GO:0035556: intracellular signal transduction2.98E-03
59GO:0006406: mRNA export from nucleus3.03E-03
60GO:0003333: amino acid transmembrane transport3.46E-03
61GO:0009269: response to desiccation3.46E-03
62GO:0055085: transmembrane transport3.76E-03
63GO:0071215: cellular response to abscisic acid stimulus3.90E-03
64GO:0007165: signal transduction3.96E-03
65GO:0045492: xylan biosynthetic process4.13E-03
66GO:0009789: positive regulation of abscisic acid-activated signaling pathway4.36E-03
67GO:0010501: RNA secondary structure unwinding4.60E-03
68GO:0009658: chloroplast organization5.09E-03
69GO:0006814: sodium ion transport5.09E-03
70GO:0009556: microsporogenesis5.34E-03
71GO:0006970: response to osmotic stress5.48E-03
72GO:0000302: response to reactive oxygen species5.60E-03
73GO:1901657: glycosyl compound metabolic process6.12E-03
74GO:0009414: response to water deprivation6.59E-03
75GO:0010029: regulation of seed germination7.50E-03
76GO:0045892: negative regulation of transcription, DNA-templated7.66E-03
77GO:0015995: chlorophyll biosynthetic process8.09E-03
78GO:0009651: response to salt stress8.16E-03
79GO:0009817: defense response to fungus, incompatible interaction8.68E-03
80GO:0032259: methylation8.91E-03
81GO:0009910: negative regulation of flower development9.61E-03
82GO:0009631: cold acclimation9.61E-03
83GO:0006099: tricarboxylic acid cycle1.06E-02
84GO:0009640: photomorphogenesis1.23E-02
85GO:0006812: cation transport1.44E-02
86GO:0009585: red, far-red light phototransduction1.51E-02
87GO:0009738: abscisic acid-activated signaling pathway1.60E-02
88GO:0009909: regulation of flower development1.63E-02
89GO:0009611: response to wounding1.69E-02
90GO:0045893: positive regulation of transcription, DNA-templated1.90E-02
91GO:0009553: embryo sac development1.90E-02
92GO:0009624: response to nematode1.94E-02
93GO:0006351: transcription, DNA-templated2.00E-02
94GO:0006355: regulation of transcription, DNA-templated2.22E-02
95GO:0042744: hydrogen peroxide catabolic process2.50E-02
96GO:0006633: fatty acid biosynthetic process2.68E-02
97GO:0016036: cellular response to phosphate starvation2.73E-02
98GO:0010228: vegetative to reproductive phase transition of meristem2.96E-02
99GO:0009739: response to gibberellin3.11E-02
100GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process3.11E-02
101GO:0009617: response to bacterium3.25E-02
102GO:0010468: regulation of gene expression3.25E-02
103GO:0080167: response to karrikin4.56E-02
104GO:0010200: response to chitin4.67E-02
105GO:0044550: secondary metabolite biosynthetic process4.84E-02
RankGO TermAdjusted P value
1GO:0080081: 4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity0.00E+00
2GO:0047668: amygdalin beta-glucosidase activity0.00E+00
3GO:0080083: beta-gentiobiose beta-glucosidase activity0.00E+00
4GO:0030504: inorganic diphosphate transmembrane transporter activity0.00E+00
5GO:0004567: beta-mannosidase activity0.00E+00
6GO:0080082: esculin beta-glucosidase activity0.00E+00
7GO:0031409: pigment binding3.54E-13
8GO:0016168: chlorophyll binding5.35E-11
9GO:0015185: gamma-aminobutyric acid transmembrane transporter activity5.34E-05
10GO:0033857: diphosphoinositol-pentakisphosphate kinase activity5.34E-05
11GO:0000829: inositol heptakisphosphate kinase activity5.34E-05
12GO:0080079: cellobiose glucosidase activity5.34E-05
13GO:0000828: inositol hexakisphosphate kinase activity5.34E-05
14GO:0015180: L-alanine transmembrane transporter activity1.30E-04
15GO:0003994: aconitate hydratase activity1.30E-04
16GO:0004096: catalase activity2.22E-04
17GO:0046592: polyamine oxidase activity2.22E-04
18GO:0015189: L-lysine transmembrane transporter activity3.25E-04
19GO:0048027: mRNA 5'-UTR binding3.25E-04
20GO:0015181: arginine transmembrane transporter activity3.25E-04
21GO:0000156: phosphorelay response regulator activity3.96E-04
22GO:0005313: L-glutamate transmembrane transporter activity4.35E-04
23GO:0045300: acyl-[acyl-carrier-protein] desaturase activity5.52E-04
24GO:0004629: phospholipase C activity6.76E-04
25GO:0015562: efflux transmembrane transporter activity6.76E-04
26GO:0004435: phosphatidylinositol phospholipase C activity8.05E-04
27GO:0046872: metal ion binding9.75E-04
28GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity1.38E-03
29GO:0000989: transcription factor activity, transcription factor binding1.38E-03
30GO:0047372: acylglycerol lipase activity1.88E-03
31GO:0005315: inorganic phosphate transmembrane transporter activity2.25E-03
32GO:0004565: beta-galactosidase activity2.25E-03
33GO:0008131: primary amine oxidase activity2.43E-03
34GO:0015297: antiporter activity3.16E-03
35GO:0005351: sugar:proton symporter activity3.23E-03
36GO:0008324: cation transmembrane transporter activity3.24E-03
37GO:0004707: MAP kinase activity3.46E-03
38GO:0008514: organic anion transmembrane transporter activity4.13E-03
39GO:0008168: methyltransferase activity4.90E-03
40GO:0102483: scopolin beta-glucosidase activity8.09E-03
41GO:0005515: protein binding8.79E-03
42GO:0008270: zinc ion binding9.04E-03
43GO:0050897: cobalt ion binding9.61E-03
44GO:0003697: single-stranded DNA binding1.02E-02
45GO:0008422: beta-glucosidase activity1.09E-02
46GO:0051539: 4 iron, 4 sulfur cluster binding1.12E-02
47GO:0003729: mRNA binding1.13E-02
48GO:0015293: symporter activity1.33E-02
49GO:0005198: structural molecule activity1.33E-02
50GO:0003690: double-stranded DNA binding1.55E-02
51GO:0015171: amino acid transmembrane transporter activity1.63E-02
52GO:0016874: ligase activity1.86E-02
53GO:0022857: transmembrane transporter activity1.86E-02
54GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen2.32E-02
55GO:0015144: carbohydrate transmembrane transporter activity2.59E-02
56GO:0044212: transcription regulatory region DNA binding3.36E-02
57GO:0003824: catalytic activity3.68E-02
58GO:0005215: transporter activity3.71E-02
59GO:0004497: monooxygenase activity4.56E-02
60GO:0061630: ubiquitin protein ligase activity4.73E-02
RankGO TermAdjusted P value
1GO:0009522: photosystem I7.75E-12
2GO:0030076: light-harvesting complex5.88E-11
3GO:0009523: photosystem II1.31E-09
4GO:0010287: plastoglobule8.14E-09
5GO:0009579: thylakoid3.78E-07
6GO:0009534: chloroplast thylakoid6.77E-06
7GO:0016021: integral component of membrane1.09E-05
8GO:0016020: membrane2.88E-05
9GO:0009535: chloroplast thylakoid membrane2.92E-05
10GO:0005777: peroxisome7.24E-05
11GO:0042651: thylakoid membrane1.51E-04
12GO:0009941: chloroplast envelope2.18E-04
13GO:0009517: PSII associated light-harvesting complex II4.35E-04
14GO:0048046: apoplast2.31E-03
15GO:0005618: cell wall2.69E-03
16GO:0009507: chloroplast3.12E-03
17GO:0031966: mitochondrial membrane1.44E-02
18GO:0022626: cytosolic ribosome1.59E-02
19GO:0016607: nuclear speck1.74E-02
20GO:0005623: cell2.32E-02
21GO:0009505: plant-type cell wall4.20E-02
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Gene type



Gene DE type