Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G22200

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0080180: 2-methylguanosine metabolic process0.00E+00
2GO:0045792: negative regulation of cell size0.00E+00
3GO:0039694: viral RNA genome replication0.00E+00
4GO:0042430: indole-containing compound metabolic process0.00E+00
5GO:0002376: immune system process0.00E+00
6GO:0048227: plasma membrane to endosome transport0.00E+00
7GO:0010499: proteasomal ubiquitin-independent protein catabolic process0.00E+00
8GO:0001881: receptor recycling0.00E+00
9GO:1900409: positive regulation of cellular response to oxidative stress0.00E+00
10GO:0072722: response to amitrole0.00E+00
11GO:0042742: defense response to bacterium1.57E-07
12GO:0006468: protein phosphorylation3.87E-07
13GO:0070588: calcium ion transmembrane transport3.44E-06
14GO:0031349: positive regulation of defense response5.06E-06
15GO:0009627: systemic acquired resistance5.79E-06
16GO:0046686: response to cadmium ion1.08E-05
17GO:0009407: toxin catabolic process1.11E-05
18GO:0048281: inflorescence morphogenesis1.79E-05
19GO:0010150: leaf senescence5.31E-05
20GO:0006952: defense response6.01E-05
21GO:0045454: cell redox homeostasis6.66E-05
22GO:0080142: regulation of salicylic acid biosynthetic process7.06E-05
23GO:0007166: cell surface receptor signaling pathway7.43E-05
24GO:0009617: response to bacterium8.26E-05
25GO:0034976: response to endoplasmic reticulum stress1.19E-04
26GO:0006508: proteolysis1.85E-04
27GO:0010200: response to chitin2.70E-04
28GO:0006805: xenobiotic metabolic process3.34E-04
29GO:0043547: positive regulation of GTPase activity3.34E-04
30GO:0006422: aspartyl-tRNA aminoacylation3.34E-04
31GO:1990022: RNA polymerase III complex localization to nucleus3.34E-04
32GO:0055081: anion homeostasis3.34E-04
33GO:0009700: indole phytoalexin biosynthetic process3.34E-04
34GO:0044376: RNA polymerase II complex import to nucleus3.34E-04
35GO:0010230: alternative respiration3.34E-04
36GO:0046244: salicylic acid catabolic process3.34E-04
37GO:0060862: negative regulation of floral organ abscission3.34E-04
38GO:0009968: negative regulation of signal transduction3.34E-04
39GO:0017183: peptidyl-diphthamide biosynthetic process from peptidyl-histidine3.34E-04
40GO:0034975: protein folding in endoplasmic reticulum3.34E-04
41GO:0009636: response to toxic substance3.55E-04
42GO:0006623: protein targeting to vacuole4.37E-04
43GO:0000302: response to reactive oxygen species4.78E-04
44GO:0010112: regulation of systemic acquired resistance5.24E-04
45GO:0009414: response to water deprivation6.72E-04
46GO:1902000: homogentisate catabolic process7.29E-04
47GO:0008535: respiratory chain complex IV assembly7.29E-04
48GO:0002221: pattern recognition receptor signaling pathway7.29E-04
49GO:0015914: phospholipid transport7.29E-04
50GO:2000072: regulation of defense response to fungus, incompatible interaction7.29E-04
51GO:0009615: response to virus7.65E-04
52GO:0010272: response to silver ion1.18E-03
53GO:0009072: aromatic amino acid family metabolic process1.18E-03
54GO:0000289: nuclear-transcribed mRNA poly(A) tail shortening1.18E-03
55GO:0008333: endosome to lysosome transport1.18E-03
56GO:1900140: regulation of seedling development1.18E-03
57GO:0055074: calcium ion homeostasis1.18E-03
58GO:0006517: protein deglycosylation1.18E-03
59GO:0002237: response to molecule of bacterial origin1.21E-03
60GO:0007034: vacuolar transport1.21E-03
61GO:0015031: protein transport1.26E-03
62GO:0010043: response to zinc ion1.28E-03
63GO:0045087: innate immune response1.43E-03
64GO:0009409: response to cold1.47E-03
65GO:0006886: intracellular protein transport1.68E-03
66GO:0002239: response to oomycetes1.70E-03
67GO:0071323: cellular response to chitin1.70E-03
68GO:0001676: long-chain fatty acid metabolic process1.70E-03
69GO:0048194: Golgi vesicle budding1.70E-03
70GO:0060548: negative regulation of cell death2.28E-03
71GO:0031087: deadenylation-independent decapping of nuclear-transcribed mRNA2.28E-03
72GO:0010188: response to microbial phytotoxin2.28E-03
73GO:0009625: response to insect2.41E-03
74GO:0042147: retrograde transport, endosome to Golgi2.84E-03
75GO:0045116: protein neddylation2.91E-03
76GO:0030308: negative regulation of cell growth2.91E-03
77GO:0009697: salicylic acid biosynthetic process2.91E-03
78GO:0046283: anthocyanin-containing compound metabolic process2.91E-03
79GO:0006564: L-serine biosynthetic process2.91E-03
80GO:0031365: N-terminal protein amino acid modification2.91E-03
81GO:0006662: glycerol ether metabolic process3.30E-03
82GO:0009228: thiamine biosynthetic process3.60E-03
83GO:0010942: positive regulation of cell death3.60E-03
84GO:0006751: glutathione catabolic process3.60E-03
85GO:0006891: intra-Golgi vesicle-mediated transport4.08E-03
86GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response4.33E-03
87GO:0000911: cytokinesis by cell plate formation4.33E-03
88GO:0009612: response to mechanical stimulus4.33E-03
89GO:0006694: steroid biosynthetic process4.33E-03
90GO:0030163: protein catabolic process4.64E-03
91GO:0009651: response to salt stress4.95E-03
92GO:0043090: amino acid import5.11E-03
93GO:0070370: cellular heat acclimation5.11E-03
94GO:0055114: oxidation-reduction process5.11E-03
95GO:0006400: tRNA modification5.11E-03
96GO:0046777: protein autophosphorylation5.57E-03
97GO:0009787: regulation of abscisic acid-activated signaling pathway5.94E-03
98GO:0009819: drought recovery5.94E-03
99GO:0006491: N-glycan processing5.94E-03
100GO:0031540: regulation of anthocyanin biosynthetic process5.94E-03
101GO:0009816: defense response to bacterium, incompatible interaction6.23E-03
102GO:0009699: phenylpropanoid biosynthetic process6.81E-03
103GO:0006075: (1->3)-beta-D-glucan biosynthetic process6.81E-03
104GO:0010120: camalexin biosynthetic process6.81E-03
105GO:0010204: defense response signaling pathway, resistance gene-independent6.81E-03
106GO:0030968: endoplasmic reticulum unfolded protein response6.81E-03
107GO:0043562: cellular response to nitrogen levels6.81E-03
108GO:0009790: embryo development7.35E-03
109GO:0008219: cell death7.70E-03
110GO:0046685: response to arsenic-containing substance7.73E-03
111GO:0009821: alkaloid biosynthetic process7.73E-03
112GO:0006499: N-terminal protein myristoylation8.49E-03
113GO:0010205: photoinhibition8.68E-03
114GO:0043067: regulation of programmed cell death8.68E-03
115GO:0050832: defense response to fungus9.40E-03
116GO:0000103: sulfate assimilation9.69E-03
117GO:0006032: chitin catabolic process9.69E-03
118GO:0043069: negative regulation of programmed cell death9.69E-03
119GO:0034599: cellular response to oxidative stress1.02E-02
120GO:0000272: polysaccharide catabolic process1.07E-02
121GO:0009737: response to abscisic acid1.17E-02
122GO:0015706: nitrate transport1.18E-02
123GO:0010105: negative regulation of ethylene-activated signaling pathway1.18E-02
124GO:0071365: cellular response to auxin stimulus1.18E-02
125GO:0051707: response to other organism1.26E-02
126GO:0010102: lateral root morphogenesis1.29E-02
127GO:0034605: cellular response to heat1.41E-02
128GO:0009965: leaf morphogenesis1.42E-02
129GO:0042343: indole glucosinolate metabolic process1.53E-02
130GO:0010167: response to nitrate1.53E-02
131GO:0010053: root epidermal cell differentiation1.53E-02
132GO:0000162: tryptophan biosynthetic process1.65E-02
133GO:0000027: ribosomal large subunit assembly1.77E-02
134GO:2000377: regulation of reactive oxygen species metabolic process1.77E-02
135GO:0006487: protein N-linked glycosylation1.77E-02
136GO:0009735: response to cytokinin1.89E-02
137GO:0016575: histone deacetylation1.90E-02
138GO:0016998: cell wall macromolecule catabolic process2.03E-02
139GO:0098542: defense response to other organism2.03E-02
140GO:0080167: response to karrikin2.08E-02
141GO:0009626: plant-type hypersensitive response2.15E-02
142GO:0006979: response to oxidative stress2.16E-02
143GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway2.17E-02
144GO:0009814: defense response, incompatible interaction2.17E-02
145GO:0007131: reciprocal meiotic recombination2.17E-02
146GO:0071456: cellular response to hypoxia2.17E-02
147GO:0019748: secondary metabolic process2.17E-02
148GO:0009620: response to fungus2.22E-02
149GO:0010227: floral organ abscission2.31E-02
150GO:0042127: regulation of cell proliferation2.45E-02
151GO:0042631: cellular response to water deprivation2.74E-02
152GO:0042391: regulation of membrane potential2.74E-02
153GO:0008033: tRNA processing2.74E-02
154GO:0010501: RNA secondary structure unwinding2.74E-02
155GO:0008360: regulation of cell shape2.89E-02
156GO:0010197: polar nucleus fusion2.89E-02
157GO:0010182: sugar mediated signaling pathway2.89E-02
158GO:0009646: response to absence of light3.05E-02
159GO:0061025: membrane fusion3.05E-02
160GO:0006457: protein folding3.15E-02
161GO:0009749: response to glucose3.20E-02
162GO:0032259: methylation3.21E-02
163GO:0009751: response to salicylic acid3.33E-02
164GO:0002229: defense response to oomycetes3.36E-02
165GO:0010193: response to ozone3.36E-02
166GO:0007264: small GTPase mediated signal transduction3.52E-02
167GO:0010252: auxin homeostasis3.85E-02
168GO:0006464: cellular protein modification process3.85E-02
169GO:0009607: response to biotic stimulus4.54E-02
170GO:0042128: nitrate assimilation4.72E-02
RankGO TermAdjusted P value
1GO:0050269: coniferyl-aldehyde dehydrogenase activity0.00E+00
2GO:0004164: diphthine synthase activity0.00E+00
3GO:0070577: lysine-acetylated histone binding0.00E+00
4GO:0050220: prostaglandin-E synthase activity0.00E+00
5GO:0010298: dihydrocamalexic acid decarboxylase activity0.00E+00
6GO:0016504: peptidase activator activity0.00E+00
7GO:0016034: maleylacetoacetate isomerase activity0.00E+00
8GO:0005516: calmodulin binding2.58E-07
9GO:0005524: ATP binding1.44E-06
10GO:0005388: calcium-transporting ATPase activity1.98E-06
11GO:0004190: aspartic-type endopeptidase activity3.44E-06
12GO:0043295: glutathione binding6.86E-06
13GO:0004714: transmembrane receptor protein tyrosine kinase activity1.04E-05
14GO:0003756: protein disulfide isomerase activity1.52E-05
15GO:0016301: kinase activity2.54E-05
16GO:0004364: glutathione transferase activity2.63E-05
17GO:0004674: protein serine/threonine kinase activity3.35E-05
18GO:0004675: transmembrane receptor protein serine/threonine kinase activity4.42E-05
19GO:0004672: protein kinase activity1.74E-04
20GO:2001227: quercitrin binding3.34E-04
21GO:0004425: indole-3-glycerol-phosphate synthase activity3.34E-04
22GO:0015085: calcium ion transmembrane transporter activity3.34E-04
23GO:0004815: aspartate-tRNA ligase activity3.34E-04
24GO:0033925: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity3.34E-04
25GO:0004591: oxoglutarate dehydrogenase (succinyl-transferring) activity3.34E-04
26GO:2001147: camalexin binding3.34E-04
27GO:0004648: O-phospho-L-serine:2-oxoglutarate aminotransferase activity3.34E-04
28GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor5.65E-04
29GO:0004713: protein tyrosine kinase activity7.22E-04
30GO:0038199: ethylene receptor activity7.29E-04
31GO:0019172: glyoxalase III activity7.29E-04
32GO:0043141: ATP-dependent 5'-3' DNA helicase activity7.29E-04
33GO:0004338: glucan exo-1,3-beta-glucosidase activity7.29E-04
34GO:0004566: beta-glucuronidase activity7.29E-04
35GO:0019781: NEDD8 activating enzyme activity7.29E-04
36GO:0015035: protein disulfide oxidoreductase activity8.51E-04
37GO:0008430: selenium binding1.18E-03
38GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity1.18E-03
39GO:0004148: dihydrolipoyl dehydrogenase activity1.18E-03
40GO:0003840: gamma-glutamyltransferase activity1.18E-03
41GO:0004557: alpha-galactosidase activity1.18E-03
42GO:0036374: glutathione hydrolase activity1.18E-03
43GO:0052692: raffinose alpha-galactosidase activity1.18E-03
44GO:0005093: Rab GDP-dissociation inhibitor activity1.18E-03
45GO:0050897: cobalt ion binding1.28E-03
46GO:0008061: chitin binding1.35E-03
47GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity1.70E-03
48GO:0016656: monodehydroascorbate reductase (NADH) activity1.70E-03
49GO:0051740: ethylene binding1.70E-03
50GO:0070628: proteasome binding2.28E-03
51GO:0004930: G-protein coupled receptor activity2.28E-03
52GO:0047134: protein-disulfide reductase activity2.84E-03
53GO:0008641: small protein activating enzyme activity2.91E-03
54GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity2.91E-03
55GO:0005496: steroid binding2.91E-03
56GO:0004791: thioredoxin-disulfide reductase activity3.55E-03
57GO:0004029: aldehyde dehydrogenase (NAD) activity3.60E-03
58GO:0030976: thiamine pyrophosphate binding3.60E-03
59GO:0102391: decanoate--CoA ligase activity4.33E-03
60GO:0004012: phospholipid-translocating ATPase activity4.33E-03
61GO:0004602: glutathione peroxidase activity4.33E-03
62GO:0016746: transferase activity, transferring acyl groups4.70E-03
63GO:0008235: metalloexopeptidase activity5.11E-03
64GO:0008320: protein transmembrane transporter activity5.11E-03
65GO:0004467: long-chain fatty acid-CoA ligase activity5.11E-03
66GO:0052747: sinapyl alcohol dehydrogenase activity5.94E-03
67GO:0003843: 1,3-beta-D-glucan synthase activity6.81E-03
68GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)6.81E-03
69GO:0008135: translation factor activity, RNA binding6.81E-03
70GO:0004683: calmodulin-dependent protein kinase activity6.94E-03
71GO:0008565: protein transporter activity7.59E-03
72GO:0071949: FAD binding7.73E-03
73GO:0003678: DNA helicase activity7.73E-03
74GO:0005096: GTPase activator activity8.09E-03
75GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity8.68E-03
76GO:0016844: strictosidine synthase activity8.68E-03
77GO:0015112: nitrate transmembrane transporter activity8.68E-03
78GO:0004673: protein histidine kinase activity9.69E-03
79GO:0004568: chitinase activity9.69E-03
80GO:0003746: translation elongation factor activity9.77E-03
81GO:0001054: RNA polymerase I activity1.07E-02
82GO:0004177: aminopeptidase activity1.07E-02
83GO:0008559: xenobiotic-transporting ATPase activity1.07E-02
84GO:0004712: protein serine/threonine/tyrosine kinase activity1.07E-02
85GO:0005507: copper ion binding1.17E-02
86GO:0045551: cinnamyl-alcohol dehydrogenase activity1.18E-02
87GO:0000175: 3'-5'-exoribonuclease activity1.29E-02
88GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.29E-02
89GO:0015095: magnesium ion transmembrane transporter activity1.29E-02
90GO:0000155: phosphorelay sensor kinase activity1.29E-02
91GO:0005262: calcium channel activity1.29E-02
92GO:0004535: poly(A)-specific ribonuclease activity1.41E-02
93GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.41E-02
94GO:0008168: methyltransferase activity1.51E-02
95GO:0030553: cGMP binding1.53E-02
96GO:0003712: transcription cofactor activity1.53E-02
97GO:0030552: cAMP binding1.53E-02
98GO:0003899: DNA-directed 5'-3' RNA polymerase activity1.71E-02
99GO:0003954: NADH dehydrogenase activity1.77E-02
100GO:0004407: histone deacetylase activity1.77E-02
101GO:0005528: FK506 binding1.77E-02
102GO:0005216: ion channel activity1.90E-02
103GO:0004540: ribonuclease activity2.03E-02
104GO:0033612: receptor serine/threonine kinase binding2.03E-02
105GO:0008408: 3'-5' exonuclease activity2.03E-02
106GO:0004497: monooxygenase activity2.08E-02
107GO:0000166: nucleotide binding2.16E-02
108GO:0008810: cellulase activity2.31E-02
109GO:0008514: organic anion transmembrane transporter activity2.45E-02
110GO:0030551: cyclic nucleotide binding2.74E-02
111GO:0005249: voltage-gated potassium channel activity2.74E-02
112GO:0004871: signal transducer activity2.77E-02
113GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen2.88E-02
114GO:0016740: transferase activity2.89E-02
115GO:0004527: exonuclease activity2.89E-02
116GO:0010181: FMN binding3.05E-02
117GO:0004872: receptor activity3.20E-02
118GO:0005515: protein binding3.35E-02
119GO:0051213: dioxygenase activity4.37E-02
120GO:0008194: UDP-glycosyltransferase activity4.68E-02
121GO:0009931: calcium-dependent protein serine/threonine kinase activity4.72E-02
122GO:0004004: ATP-dependent RNA helicase activity4.90E-02
123GO:0030247: polysaccharide binding4.90E-02
124GO:0016798: hydrolase activity, acting on glycosyl bonds4.90E-02
RankGO TermAdjusted P value
1GO:0019034: viral replication complex0.00E+00
2GO:0000327: lytic vacuole within protein storage vacuole0.00E+00
3GO:0005886: plasma membrane2.50E-13
4GO:0005783: endoplasmic reticulum3.94E-12
5GO:0031902: late endosome membrane2.38E-05
6GO:0016021: integral component of membrane3.56E-05
7GO:0005788: endoplasmic reticulum lumen8.61E-05
8GO:0030904: retromer complex1.60E-04
9GO:0005789: endoplasmic reticulum membrane1.98E-04
10GO:0005887: integral component of plasma membrane2.57E-04
11GO:0030014: CCR4-NOT complex3.34E-04
12GO:0017119: Golgi transport complex7.22E-04
13GO:0031304: intrinsic component of mitochondrial inner membrane7.29E-04
14GO:0005901: caveola7.29E-04
15GO:0030134: ER to Golgi transport vesicle7.29E-04
16GO:0005774: vacuolar membrane7.94E-04
17GO:0005765: lysosomal membrane8.32E-04
18GO:0030139: endocytic vesicle1.18E-03
19GO:0005795: Golgi stack1.35E-03
20GO:0005829: cytosol1.92E-03
21GO:0009898: cytoplasmic side of plasma membrane2.28E-03
22GO:0030660: Golgi-associated vesicle membrane2.28E-03
23GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane2.28E-03
24GO:0048046: apoplast2.38E-03
25GO:0005773: vacuole2.78E-03
26GO:0008250: oligosaccharyltransferase complex2.91E-03
27GO:0005771: multivesicular body3.60E-03
28GO:0009504: cell plate3.81E-03
29GO:0005801: cis-Golgi network4.33E-03
30GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane5.94E-03
31GO:0000148: 1,3-beta-D-glucan synthase complex6.81E-03
32GO:0000326: protein storage vacuole6.81E-03
33GO:0005736: DNA-directed RNA polymerase I complex7.73E-03
34GO:0030665: clathrin-coated vesicle membrane8.68E-03
35GO:0009505: plant-type cell wall1.11E-02
36GO:0005794: Golgi apparatus1.12E-02
37GO:0005769: early endosome1.65E-02
38GO:0043234: protein complex1.65E-02
39GO:0005839: proteasome core complex2.03E-02
40GO:0010008: endosome membrane2.09E-02
41GO:0043231: intracellular membrane-bounded organelle3.82E-02
42GO:0005802: trans-Golgi network4.29E-02
43GO:0030529: intracellular ribonucleoprotein complex4.37E-02
44GO:0000932: P-body4.37E-02
45GO:0005622: intracellular4.97E-02
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Gene type



Gene DE type