co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G22070

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0043633: polyadenylation-dependent RNA catabolic process	0.00E+00
2	GO:0098755: maintenance of seed dormancy by absisic acid	0.00E+00
3	GO:2001253: regulation of histone H3-K36 trimethylation	0.00E+00
4	GO:0006987: activation of signaling protein activity involved in unfolded protein response	0.00E+00
5	GO:0032497: detection of lipopolysaccharide	0.00E+00
6	GO:0010793: regulation of mRNA export from nucleus	0.00E+00
7	GO:0071596: ubiquitin-dependent protein catabolic process via the N-end rule pathway	1.37E-04
8	GO:0007292: female gamete generation	1.37E-04
9	GO:0010184: cytokinin transport	1.37E-04
10	GO:0031338: regulation of vesicle fusion	1.37E-04
11	GO:1902466: positive regulation of histone H3-K27 trimethylation	1.37E-04
12	GO:0035266: meristem growth	1.37E-04
13	GO:0009051: pentose-phosphate shunt, oxidative branch	1.44E-04
14	GO:0010119: regulation of stomatal movement	2.55E-04
15	GO:0050684: regulation of mRNA processing	3.16E-04
16	GO:0050994: regulation of lipid catabolic process	3.16E-04
17	GO:0051788: response to misfolded protein	3.16E-04
18	GO:0009727: detection of ethylene stimulus	3.16E-04
19	GO:0052542: defense response by callose deposition	3.16E-04
20	GO:0051258: protein polymerization	3.16E-04
21	GO:0010163: high-affinity potassium ion import	3.16E-04
22	GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway	5.20E-04
23	GO:0060968: regulation of gene silencing	5.20E-04
24	GO:0032784: regulation of DNA-templated transcription, elongation	5.20E-04
25	GO:1900140: regulation of seedling development	5.20E-04
26	GO:0090630: activation of GTPase activity	5.20E-04
27	GO:0030029: actin filament-based process	5.20E-04
28	GO:2001289: lipid X metabolic process	7.44E-04
29	GO:1901000: regulation of response to salt stress	7.44E-04
30	GO:0070301: cellular response to hydrogen peroxide	7.44E-04
31	GO:0072334: UDP-galactose transmembrane transport	7.44E-04
32	GO:0015749: monosaccharide transport	7.44E-04
33	GO:0009399: nitrogen fixation	7.44E-04
34	GO:0006624: vacuolar protein processing	7.44E-04
35	GO:0048367: shoot system development	7.57E-04
36	GO:0033320: UDP-D-xylose biosynthetic process	9.85E-04
37	GO:0006542: glutamine biosynthetic process	9.85E-04
38	GO:0048544: recognition of pollen	1.03E-03
39	GO:0000302: response to reactive oxygen species	1.17E-03
40	GO:0043097: pyrimidine nucleoside salvage	1.25E-03
41	GO:0006090: pyruvate metabolic process	1.25E-03
42	GO:0098719: sodium ion import across plasma membrane	1.25E-03
43	GO:0005513: detection of calcium ion	1.25E-03
44	GO:0048232: male gamete generation	1.53E-03
45	GO:0043248: proteasome assembly	1.53E-03
46	GO:0042732: D-xylose metabolic process	1.53E-03
47	GO:0035194: posttranscriptional gene silencing by RNA	1.53E-03
48	GO:0010358: leaf shaping	1.53E-03
49	GO:0006206: pyrimidine nucleobase metabolic process	1.53E-03
50	GO:0010337: regulation of salicylic acid metabolic process	1.53E-03
51	GO:0050665: hydrogen peroxide biosynthetic process	1.53E-03
52	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	1.53E-03
53	GO:0048827: phyllome development	1.53E-03
54	GO:0006388: tRNA splicing, via endonucleolytic cleavage and ligation	1.53E-03
55	GO:0010029: regulation of seed germination	1.77E-03
56	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	1.83E-03
57	GO:0009423: chorismate biosynthetic process	1.83E-03
58	GO:0009612: response to mechanical stimulus	1.83E-03
59	GO:0009651: response to salt stress	1.92E-03
60	GO:0048573: photoperiodism, flowering	1.97E-03
61	GO:0098869: cellular oxidant detoxification	2.15E-03
62	GO:0006955: immune response	2.15E-03
63	GO:0046470: phosphatidylcholine metabolic process	2.15E-03
64	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	2.15E-03
65	GO:0006333: chromatin assembly or disassembly	2.15E-03
66	GO:0010468: regulation of gene expression	2.26E-03
67	GO:0006491: N-glycan processing	2.49E-03
68	GO:0009690: cytokinin metabolic process	2.49E-03
69	GO:0006605: protein targeting	2.49E-03
70	GO:0010078: maintenance of root meristem identity	2.49E-03
71	GO:0045087: innate immune response	2.75E-03
72	GO:0001510: RNA methylation	2.85E-03
73	GO:0030968: endoplasmic reticulum unfolded protein response	2.85E-03
74	GO:0042542: response to hydrogen peroxide	3.40E-03
75	GO:0051453: regulation of intracellular pH	3.60E-03
76	GO:0009723: response to ethylene	3.77E-03
77	GO:0031627: telomeric loop formation	4.00E-03
78	GO:0010629: negative regulation of gene expression	4.00E-03
79	GO:0007064: mitotic sister chromatid cohesion	4.00E-03
80	GO:0048829: root cap development	4.00E-03
81	GO:0010015: root morphogenesis	4.42E-03
82	GO:0052544: defense response by callose deposition in cell wall	4.42E-03
83	GO:0009073: aromatic amino acid family biosynthetic process	4.42E-03
84	GO:0010105: negative regulation of ethylene-activated signaling pathway	4.85E-03
85	GO:0046686: response to cadmium ion	5.00E-03
86	GO:0010102: lateral root morphogenesis	5.30E-03
87	GO:0006108: malate metabolic process	5.30E-03
88	GO:0006006: glucose metabolic process	5.30E-03
89	GO:0002237: response to molecule of bacterial origin	5.76E-03
90	GO:0009933: meristem structural organization	5.76E-03
91	GO:0007034: vacuolar transport	5.76E-03
92	GO:0006446: regulation of translational initiation	5.76E-03
93	GO:0009225: nucleotide-sugar metabolic process	6.23E-03
94	GO:0080188: RNA-directed DNA methylation	6.23E-03
95	GO:0090351: seedling development	6.23E-03
96	GO:0006863: purine nucleobase transport	6.71E-03
97	GO:0048364: root development	7.13E-03
98	GO:2000377: regulation of reactive oxygen species metabolic process	7.22E-03
99	GO:0006825: copper ion transport	7.73E-03
100	GO:0051260: protein homooligomerization	8.26E-03
101	GO:0007165: signal transduction	8.29E-03
102	GO:0009737: response to abscisic acid	8.62E-03
103	GO:0030433: ubiquitin-dependent ERAD pathway	8.79E-03
104	GO:0009845: seed germination	9.16E-03
105	GO:0006979: response to oxidative stress	9.19E-03
106	GO:0071215: cellular response to abscisic acid stimulus	9.35E-03
107	GO:0009873: ethylene-activated signaling pathway	9.35E-03
108	GO:0001944: vasculature development	9.35E-03
109	GO:0009625: response to insect	9.35E-03
110	GO:0009790: embryo development	9.88E-03
111	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.05E-02
112	GO:0042631: cellular response to water deprivation	1.11E-02
113	GO:0010150: leaf senescence	1.17E-02
114	GO:0010182: sugar mediated signaling pathway	1.17E-02
115	GO:0046323: glucose import	1.17E-02
116	GO:0006814: sodium ion transport	1.23E-02
117	GO:0006635: fatty acid beta-oxidation	1.36E-02
118	GO:0071281: cellular response to iron ion	1.49E-02
119	GO:0006914: autophagy	1.55E-02
120	GO:0016579: protein deubiquitination	1.69E-02
121	GO:0001666: response to hypoxia	1.76E-02
122	GO:0009816: defense response to bacterium, incompatible interaction	1.83E-02
123	GO:0042128: nitrate assimilation	1.90E-02
124	GO:0006950: response to stress	1.98E-02
125	GO:0006511: ubiquitin-dependent protein catabolic process	2.06E-02
126	GO:0008219: cell death	2.12E-02
127	GO:0048366: leaf development	2.14E-02
128	GO:0010311: lateral root formation	2.20E-02
129	GO:0006499: N-terminal protein myristoylation	2.28E-02
130	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.33E-02
131	GO:0016192: vesicle-mediated transport	2.37E-02
132	GO:0046777: protein autophosphorylation	2.41E-02
133	GO:0016051: carbohydrate biosynthetic process	2.51E-02
134	GO:0006099: tricarboxylic acid cycle	2.60E-02
135	GO:0006631: fatty acid metabolic process	2.84E-02
136	GO:0008283: cell proliferation	3.01E-02
137	GO:0006468: protein phosphorylation	3.03E-02
138	GO:0009965: leaf morphogenesis	3.27E-02
139	GO:0009751: response to salicylic acid	3.28E-02
140	GO:0009408: response to heat	3.32E-02
141	GO:0000165: MAPK cascade	3.45E-02
142	GO:0016310: phosphorylation	3.46E-02
143	GO:0006364: rRNA processing	3.72E-02
144	GO:0051603: proteolysis involved in cellular protein catabolic process	3.82E-02
145	GO:0006417: regulation of translation	4.00E-02
146	GO:0009626: plant-type hypersensitive response	4.39E-02
147	GO:0055114: oxidation-reduction process	4.50E-02
148	GO:0016569: covalent chromatin modification	4.58E-02
149	GO:0006396: RNA processing	4.88E-02
150	GO:0009742: brassinosteroid mediated signaling pathway	4.98E-02

Rank	GO Term	Adjusted P value
1	GO:0005358: high-affinity hydrogen:glucose symporter activity	0.00E+00
2	GO:0015211: purine nucleoside transmembrane transporter activity	0.00E+00
3	GO:0016428: tRNA (cytosine-5-)-methyltransferase activity	0.00E+00
4	GO:0009679: hexose:proton symporter activity	1.37E-04
5	GO:0004112: cyclic-nucleotide phosphodiesterase activity	1.37E-04
6	GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity	1.37E-04
7	GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity	1.37E-04
8	GO:0016274: protein-arginine N-methyltransferase activity	1.37E-04
9	GO:0005096: GTPase activator activity	2.24E-04
10	GO:0016301: kinase activity	2.48E-04
11	GO:0005524: ATP binding	2.84E-04
12	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	3.14E-04
13	GO:0038199: ethylene receptor activity	3.16E-04
14	GO:0003849: 3-deoxy-7-phosphoheptulonate synthase activity	3.16E-04
15	GO:0005047: signal recognition particle binding	5.20E-04
16	GO:0019829: cation-transporting ATPase activity	5.20E-04
17	GO:0004473: malate dehydrogenase (decarboxylating) (NADP+) activity	5.20E-04
18	GO:0004707: MAP kinase activity	5.96E-04
19	GO:0004108: citrate (Si)-synthase activity	7.44E-04
20	GO:0030527: structural constituent of chromatin	7.44E-04
21	GO:0051740: ethylene binding	7.44E-04
22	GO:0004737: pyruvate decarboxylase activity	9.85E-04
23	GO:0004345: glucose-6-phosphate dehydrogenase activity	9.85E-04
24	GO:0004471: malate dehydrogenase (decarboxylating) (NAD+) activity	9.85E-04
25	GO:0004470: malic enzyme activity	9.85E-04
26	GO:0016652: oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor	9.85E-04
27	GO:0005459: UDP-galactose transmembrane transporter activity	1.25E-03
28	GO:0015145: monosaccharide transmembrane transporter activity	1.25E-03
29	GO:0008948: oxaloacetate decarboxylase activity	1.25E-03
30	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	1.25E-03
31	GO:0017137: Rab GTPase binding	1.25E-03
32	GO:0004356: glutamate-ammonia ligase activity	1.25E-03
33	GO:0004674: protein serine/threonine kinase activity	1.45E-03
34	GO:0015144: carbohydrate transmembrane transporter activity	1.51E-03
35	GO:0048040: UDP-glucuronate decarboxylase activity	1.53E-03
36	GO:0036402: proteasome-activating ATPase activity	1.53E-03
37	GO:0030976: thiamine pyrophosphate binding	1.53E-03
38	GO:0005351: sugar:proton symporter activity	1.75E-03
39	GO:0070403: NAD+ binding	1.83E-03
40	GO:0003950: NAD+ ADP-ribosyltransferase activity	1.83E-03
41	GO:0004012: phospholipid-translocating ATPase activity	1.83E-03
42	GO:0004849: uridine kinase activity	1.83E-03
43	GO:0004602: glutathione peroxidase activity	1.83E-03
44	GO:0016831: carboxy-lyase activity	2.15E-03
45	GO:0004620: phospholipase activity	2.15E-03
46	GO:0004630: phospholipase D activity	2.85E-03
47	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	2.85E-03
48	GO:0005375: copper ion transmembrane transporter activity	2.85E-03
49	GO:0071949: FAD binding	3.22E-03
50	GO:0003682: chromatin binding	3.37E-03
51	GO:0004673: protein histidine kinase activity	4.00E-03
52	GO:0003691: double-stranded telomeric DNA binding	4.42E-03
53	GO:0015386: potassium:proton antiporter activity	4.42E-03
54	GO:0004521: endoribonuclease activity	4.85E-03
55	GO:0000155: phosphorelay sensor kinase activity	5.30E-03
56	GO:0004175: endopeptidase activity	5.76E-03
57	GO:0017025: TBP-class protein binding	6.23E-03
58	GO:0043130: ubiquitin binding	7.22E-03
59	GO:0043424: protein histidine kinase binding	7.73E-03
60	GO:0005345: purine nucleobase transmembrane transporter activity	7.73E-03
61	GO:0036459: thiol-dependent ubiquitinyl hydrolase activity	8.26E-03
62	GO:0008408: 3'-5' exonuclease activity	8.26E-03
63	GO:0016779: nucleotidyltransferase activity	8.79E-03
64	GO:0001085: RNA polymerase II transcription factor binding	1.17E-02
65	GO:0016887: ATPase activity	1.18E-02
66	GO:0004843: thiol-dependent ubiquitin-specific protease activity	1.36E-02
67	GO:0004197: cysteine-type endopeptidase activity	1.42E-02
68	GO:0000156: phosphorelay response regulator activity	1.49E-02
69	GO:0015385: sodium:proton antiporter activity	1.49E-02
70	GO:0005200: structural constituent of cytoskeleton	1.62E-02
71	GO:0051213: dioxygenase activity	1.76E-02
72	GO:0000287: magnesium ion binding	1.78E-02
73	GO:0008375: acetylglucosaminyltransferase activity	1.90E-02
74	GO:0030247: polysaccharide binding	1.98E-02
75	GO:0030246: carbohydrate binding	2.04E-02
76	GO:0004497: monooxygenase activity	2.25E-02
77	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	2.36E-02
78	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	2.51E-02
79	GO:0050661: NADP binding	2.76E-02
80	GO:0005509: calcium ion binding	3.07E-02
81	GO:0051287: NAD binding	3.45E-02
82	GO:0031625: ubiquitin protein ligase binding	4.00E-02

Rank	GO Term	Adjusted P value
1	GO:0005785: signal recognition particle receptor complex	0.00E+00
2	GO:0005886: plasma membrane	1.33E-06
3	GO:0005783: endoplasmic reticulum	3.87E-04
4	GO:0042406: extrinsic component of endoplasmic reticulum membrane	5.20E-04
5	GO:0000176: nuclear exosome (RNase complex)	5.20E-04
6	GO:0000323: lytic vacuole	7.44E-04
7	GO:0005847: mRNA cleavage and polyadenylation specificity factor complex	1.25E-03
8	GO:0016021: integral component of membrane	1.35E-03
9	GO:0030173: integral component of Golgi membrane	1.83E-03
10	GO:0016363: nuclear matrix	1.83E-03
11	GO:0031597: cytosolic proteasome complex	1.83E-03
12	GO:0000815: ESCRT III complex	1.83E-03
13	GO:0031595: nuclear proteasome complex	2.15E-03
14	GO:0000783: nuclear telomere cap complex	2.85E-03
15	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	2.85E-03
16	GO:0008540: proteasome regulatory particle, base subcomplex	3.60E-03
17	GO:0048471: perinuclear region of cytoplasm	4.42E-03
18	GO:0016602: CCAAT-binding factor complex	5.30E-03
19	GO:0030176: integral component of endoplasmic reticulum membrane	6.23E-03
20	GO:0030136: clathrin-coated vesicle	1.05E-02
21	GO:0000785: chromatin	1.42E-02
22	GO:0005789: endoplasmic reticulum membrane	1.72E-02
23	GO:0005667: transcription factor complex	1.90E-02
24	GO:0000151: ubiquitin ligase complex	2.12E-02
25	GO:0000786: nucleosome	2.43E-02
26	GO:0031902: late endosome membrane	2.84E-02
27	GO:0005829: cytosol	2.96E-02
28	GO:0005768: endosome	2.98E-02
29	GO:0031966: mitochondrial membrane	3.54E-02
30	GO:0000502: proteasome complex	3.72E-02
31	GO:0005737: cytoplasm	4.32E-02
32	GO:0016020: membrane	4.38E-02
33	GO:0012505: endomembrane system	4.68E-02