Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G20190

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1900000: regulation of anthocyanin catabolic process0.00E+00
2GO:0045014: negative regulation of transcription by glucose0.00E+00
3GO:0090627: plant epidermal cell differentiation0.00E+00
4GO:0042493: response to drug0.00E+00
5GO:0015995: chlorophyll biosynthetic process1.25E-07
6GO:0015979: photosynthesis4.40E-07
7GO:0045490: pectin catabolic process1.42E-05
8GO:0010206: photosystem II repair1.11E-04
9GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process1.16E-04
10GO:0000476: maturation of 4.5S rRNA1.16E-04
11GO:0000967: rRNA 5'-end processing1.16E-04
12GO:0010480: microsporocyte differentiation1.16E-04
13GO:0031338: regulation of vesicle fusion1.16E-04
14GO:0034470: ncRNA processing2.69E-04
15GO:0035304: regulation of protein dephosphorylation2.69E-04
16GO:0010541: acropetal auxin transport2.69E-04
17GO:0001736: establishment of planar polarity2.69E-04
18GO:0010207: photosystem II assembly2.81E-04
19GO:0009735: response to cytokinin3.72E-04
20GO:0009664: plant-type cell wall organization3.99E-04
21GO:1901527: abscisic acid-activated signaling pathway involved in stomatal movement4.45E-04
22GO:0010160: formation of animal organ boundary4.45E-04
23GO:0080055: low-affinity nitrate transport4.45E-04
24GO:0045493: xylan catabolic process4.45E-04
25GO:0090630: activation of GTPase activity4.45E-04
26GO:0009831: plant-type cell wall modification involved in multidimensional cell growth5.64E-04
27GO:0048443: stamen development6.12E-04
28GO:0051513: regulation of monopolar cell growth6.38E-04
29GO:0080170: hydrogen peroxide transmembrane transport6.38E-04
30GO:0043481: anthocyanin accumulation in tissues in response to UV light6.38E-04
31GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity6.38E-04
32GO:0009650: UV protection6.38E-04
33GO:0009647: skotomorphogenesis6.38E-04
34GO:0010306: rhamnogalacturonan II biosynthetic process6.38E-04
35GO:0042631: cellular response to water deprivation7.13E-04
36GO:0034220: ion transmembrane transport7.13E-04
37GO:0009958: positive gravitropism7.67E-04
38GO:0030104: water homeostasis8.47E-04
39GO:0009828: plant-type cell wall loosening1.13E-03
40GO:0042549: photosystem II stabilization1.31E-03
41GO:0009913: epidermal cell differentiation1.31E-03
42GO:0060918: auxin transport1.31E-03
43GO:0006751: glutathione catabolic process1.31E-03
44GO:0007623: circadian rhythm1.34E-03
45GO:0009627: systemic acquired resistance1.48E-03
46GO:0009734: auxin-activated signaling pathway1.53E-03
47GO:0048437: floral organ development1.84E-03
48GO:0050829: defense response to Gram-negative bacterium1.84E-03
49GO:0009690: cytokinin metabolic process2.13E-03
50GO:0009245: lipid A biosynthetic process2.74E-03
51GO:0006783: heme biosynthetic process2.74E-03
52GO:0048589: developmental growth2.74E-03
53GO:0009640: photomorphogenesis2.80E-03
54GO:0009926: auxin polar transport2.80E-03
55GO:0010205: photoinhibition3.07E-03
56GO:0006949: syncytium formation3.41E-03
57GO:0006782: protoporphyrinogen IX biosynthetic process3.41E-03
58GO:0006535: cysteine biosynthetic process from serine3.41E-03
59GO:0048829: root cap development3.41E-03
60GO:0010015: root morphogenesis3.76E-03
61GO:0009773: photosynthetic electron transport in photosystem I3.76E-03
62GO:0019684: photosynthesis, light reaction3.76E-03
63GO:1903507: negative regulation of nucleic acid-templated transcription3.76E-03
64GO:0018119: peptidyl-cysteine S-nitrosylation3.76E-03
65GO:0048229: gametophyte development3.76E-03
66GO:0048765: root hair cell differentiation3.76E-03
67GO:0008361: regulation of cell size4.13E-03
68GO:0016024: CDP-diacylglycerol biosynthetic process4.13E-03
69GO:0010152: pollen maturation4.13E-03
70GO:0010075: regulation of meristem growth4.50E-03
71GO:0010540: basipetal auxin transport4.89E-03
72GO:0009934: regulation of meristem structural organization4.89E-03
73GO:0010143: cutin biosynthetic process4.89E-03
74GO:0042545: cell wall modification5.18E-03
75GO:0010030: positive regulation of seed germination5.29E-03
76GO:0009624: response to nematode5.34E-03
77GO:0006833: water transport5.70E-03
78GO:0019344: cysteine biosynthetic process6.12E-03
79GO:0051017: actin filament bundle assembly6.12E-03
80GO:0007017: microtubule-based process6.56E-03
81GO:0048511: rhythmic process7.00E-03
82GO:0003333: amino acid transmembrane transport7.00E-03
83GO:2000022: regulation of jasmonic acid mediated signaling pathway7.46E-03
84GO:0009733: response to auxin7.54E-03
85GO:0009411: response to UV7.92E-03
86GO:0006284: base-excision repair8.40E-03
87GO:0009789: positive regulation of abscisic acid-activated signaling pathway8.88E-03
88GO:0048653: anther development9.38E-03
89GO:0042335: cuticle development9.38E-03
90GO:0080022: primary root development9.38E-03
91GO:0048868: pollen tube development9.89E-03
92GO:0042752: regulation of circadian rhythm1.04E-02
93GO:0048825: cotyledon development1.09E-02
94GO:0000302: response to reactive oxygen species1.15E-02
95GO:0030163: protein catabolic process1.26E-02
96GO:0009567: double fertilization forming a zygote and endosperm1.31E-02
97GO:0009639: response to red or far red light1.31E-02
98GO:0009826: unidimensional cell growth1.38E-02
99GO:0009860: pollen tube growth1.54E-02
100GO:0009723: response to ethylene1.66E-02
101GO:0010411: xyloglucan metabolic process1.67E-02
102GO:0080167: response to karrikin1.78E-02
103GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.84E-02
104GO:0000160: phosphorelay signal transduction system1.86E-02
105GO:0010311: lateral root formation1.86E-02
106GO:0010218: response to far red light1.92E-02
107GO:0048527: lateral root development1.99E-02
108GO:0006865: amino acid transport2.06E-02
109GO:0016051: carbohydrate biosynthetic process2.12E-02
110GO:0009637: response to blue light2.12E-02
111GO:0034599: cellular response to oxidative stress2.19E-02
112GO:0030001: metal ion transport2.33E-02
113GO:0071555: cell wall organization2.52E-02
114GO:0010114: response to red light2.54E-02
115GO:0016042: lipid catabolic process2.55E-02
116GO:0006281: DNA repair2.62E-02
117GO:0008152: metabolic process2.89E-02
118GO:0031347: regulation of defense response2.91E-02
119GO:0009736: cytokinin-activated signaling pathway3.15E-02
120GO:0006857: oligopeptide transport3.30E-02
121GO:0048316: seed development3.63E-02
122GO:0046686: response to cadmium ion4.37E-02
123GO:0035556: intracellular signal transduction4.88E-02
RankGO TermAdjusted P value
1GO:0046406: magnesium protoporphyrin IX methyltransferase activity0.00E+00
2GO:0047513: 1,2-alpha-L-fucosidase activity0.00E+00
3GO:0061634: alpha-D-xyloside xylohydrolase0.00E+00
4GO:0080176: xyloglucan 1,6-alpha-xylosidase activity0.00E+00
5GO:0016851: magnesium chelatase activity6.10E-06
6GO:0010011: auxin binding1.15E-05
7GO:0030570: pectate lyase activity2.51E-05
8GO:0047807: cytokinin 7-beta-glucosyltransferase activity1.16E-04
9GO:0016829: lyase activity1.16E-04
10GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity1.16E-04
11GO:0010242: oxygen evolving activity1.16E-04
12GO:0004853: uroporphyrinogen decarboxylase activity1.16E-04
13GO:0080062: cytokinin 9-beta-glucosyltransferase activity1.16E-04
14GO:0003839: gamma-glutamylcyclotransferase activity2.69E-04
15GO:0016630: protochlorophyllide reductase activity2.69E-04
16GO:0080054: low-affinity nitrate transmembrane transporter activity4.45E-04
17GO:0010328: auxin influx transmembrane transporter activity8.47E-04
18GO:0009044: xylan 1,4-beta-xylosidase activity8.47E-04
19GO:0046556: alpha-L-arabinofuranosidase activity8.47E-04
20GO:0004252: serine-type endopeptidase activity1.02E-03
21GO:0008725: DNA-3-methyladenine glycosylase activity1.07E-03
22GO:0017137: Rab GTPase binding1.07E-03
23GO:0004130: cytochrome-c peroxidase activity1.31E-03
24GO:0004366: glycerol-3-phosphate O-acyltransferase activity1.31E-03
25GO:0031177: phosphopantetheine binding1.31E-03
26GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity1.31E-03
27GO:0015250: water channel activity1.33E-03
28GO:0004124: cysteine synthase activity1.56E-03
29GO:0000035: acyl binding1.56E-03
30GO:0008236: serine-type peptidase activity1.64E-03
31GO:0005096: GTPase activator activity1.81E-03
32GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process2.13E-03
33GO:0004712: protein serine/threonine/tyrosine kinase activity2.38E-03
34GO:0005515: protein binding3.24E-03
35GO:0015020: glucuronosyltransferase activity3.41E-03
36GO:0008794: arsenate reductase (glutaredoxin) activity3.76E-03
37GO:0045330: aspartyl esterase activity4.16E-03
38GO:0010329: auxin efflux transmembrane transporter activity4.50E-03
39GO:0031072: heat shock protein binding4.50E-03
40GO:0004650: polygalacturonase activity4.87E-03
41GO:0008266: poly(U) RNA binding4.89E-03
42GO:0030599: pectinesterase activity5.02E-03
43GO:0005528: FK506 binding6.12E-03
44GO:0003714: transcription corepressor activity6.12E-03
45GO:0004707: MAP kinase activity7.00E-03
46GO:0033612: receptor serine/threonine kinase binding7.00E-03
47GO:0003756: protein disulfide isomerase activity8.40E-03
48GO:0046910: pectinesterase inhibitor activity8.59E-03
49GO:0000156: phosphorelay response regulator activity1.26E-02
50GO:0051015: actin filament binding1.26E-02
51GO:0016791: phosphatase activity1.31E-02
52GO:0005200: structural constituent of cytoskeleton1.37E-02
53GO:0016788: hydrolase activity, acting on ester bonds1.46E-02
54GO:0008375: acetylglucosaminyltransferase activity1.61E-02
55GO:0052689: carboxylic ester hydrolase activity1.96E-02
56GO:0003924: GTPase activity2.62E-02
57GO:0051537: 2 iron, 2 sulfur cluster binding2.69E-02
58GO:0015293: symporter activity2.76E-02
59GO:0003755: peptidyl-prolyl cis-trans isomerase activity2.84E-02
60GO:0003777: microtubule motor activity3.38E-02
61GO:0015171: amino acid transmembrane transporter activity3.38E-02
62GO:0008289: lipid binding3.64E-02
63GO:0080043: quercetin 3-O-glucosyltransferase activity3.79E-02
64GO:0080044: quercetin 7-O-glucosyltransferase activity3.79E-02
65GO:0051082: unfolded protein binding4.04E-02
66GO:0015035: protein disulfide oxidoreductase activity4.13E-02
67GO:0016746: transferase activity, transferring acyl groups4.13E-02
68GO:0000166: nucleotide binding4.63E-02
69GO:0019843: rRNA binding4.74E-02
RankGO TermAdjusted P value
1GO:0098572: stromal side of plastid thylakoid membrane0.00E+00
2GO:0043224: nuclear SCF ubiquitin ligase complex0.00E+00
3GO:0009534: chloroplast thylakoid9.09E-16
4GO:0009535: chloroplast thylakoid membrane1.13E-11
5GO:0009570: chloroplast stroma1.77E-09
6GO:0009543: chloroplast thylakoid lumen8.32E-09
7GO:0009507: chloroplast4.19E-08
8GO:0009941: chloroplast envelope1.49E-07
9GO:0031977: thylakoid lumen5.13E-07
10GO:0009579: thylakoid1.10E-06
11GO:0010007: magnesium chelatase complex2.59E-06
12GO:0030095: chloroplast photosystem II7.57E-06
13GO:0009538: photosystem I reaction center7.12E-05
14GO:0009505: plant-type cell wall1.12E-04
15GO:0043674: columella1.16E-04
16GO:0005618: cell wall1.23E-04
17GO:0009508: plastid chromosome2.47E-04
18GO:0030093: chloroplast photosystem I2.69E-04
19GO:0009654: photosystem II oxygen evolving complex4.32E-04
20GO:0009509: chromoplast4.45E-04
21GO:0009531: secondary cell wall6.38E-04
22GO:0019898: extrinsic component of membrane8.79E-04
23GO:0016020: membrane9.90E-04
24GO:0055035: plastid thylakoid membrane1.07E-03
25GO:0009295: nucleoid1.19E-03
26GO:0009533: chloroplast stromal thylakoid1.84E-03
27GO:0042807: central vacuole1.84E-03
28GO:0009986: cell surface1.84E-03
29GO:0005576: extracellular region2.39E-03
30GO:0042644: chloroplast nucleoid2.74E-03
31GO:0045298: tubulin complex2.74E-03
32GO:0005768: endosome5.39E-03
33GO:0010287: plastoglobule6.32E-03
34GO:0015629: actin cytoskeleton7.92E-03
35GO:0009523: photosystem II1.09E-02
36GO:0071944: cell periphery1.26E-02
37GO:0048046: apoplast1.44E-02
38GO:0005856: cytoskeleton2.76E-02
39GO:0005886: plasma membrane2.94E-02
40GO:0005887: integral component of plasma membrane3.56E-02
41GO:0012505: endomembrane system3.96E-02
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Gene type



Gene DE type