co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G19270

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010793: regulation of mRNA export from nucleus	0.00E+00
2	GO:0000188: inactivation of MAPK activity	0.00E+00
3	GO:0007160: cell-matrix adhesion	0.00E+00
4	GO:2001253: regulation of histone H3-K36 trimethylation	0.00E+00
5	GO:0010401: pectic galactan metabolic process	0.00E+00
6	GO:0006468: protein phosphorylation	5.06E-10
7	GO:0010044: response to aluminum ion	3.77E-05
8	GO:0031338: regulation of vesicle fusion	9.14E-05
9	GO:0006144: purine nucleobase metabolic process	9.14E-05
10	GO:0016337: single organismal cell-cell adhesion	9.14E-05
11	GO:0019628: urate catabolic process	9.14E-05
12	GO:0043985: histone H4-R3 methylation	9.14E-05
13	GO:0006643: membrane lipid metabolic process	9.14E-05
14	GO:0008219: cell death	9.51E-05
15	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	2.16E-04
16	GO:0015012: heparan sulfate proteoglycan biosynthetic process	2.16E-04
17	GO:0006024: glycosaminoglycan biosynthetic process	2.16E-04
18	GO:0050684: regulation of mRNA processing	2.16E-04
19	GO:0052541: plant-type cell wall cellulose metabolic process	2.16E-04
20	GO:0007584: response to nutrient	2.16E-04
21	GO:0030010: establishment of cell polarity	2.16E-04
22	GO:0052542: defense response by callose deposition	2.16E-04
23	GO:0051258: protein polymerization	2.16E-04
24	GO:0009738: abscisic acid-activated signaling pathway	2.25E-04
25	GO:0090630: activation of GTPase activity	3.61E-04
26	GO:0010351: lithium ion transport	3.61E-04
27	GO:0032784: regulation of DNA-templated transcription, elongation	3.61E-04
28	GO:0006882: cellular zinc ion homeostasis	5.20E-04
29	GO:0048194: Golgi vesicle budding	5.20E-04
30	GO:0072583: clathrin-dependent endocytosis	5.20E-04
31	GO:0010107: potassium ion import	6.90E-04
32	GO:0098719: sodium ion import across plasma membrane	8.73E-04
33	GO:0006665: sphingolipid metabolic process	8.73E-04
34	GO:0010225: response to UV-C	8.73E-04
35	GO:0006090: pyruvate metabolic process	8.73E-04
36	GO:0006014: D-ribose metabolic process	1.07E-03
37	GO:0010337: regulation of salicylic acid metabolic process	1.07E-03
38	GO:0006499: N-terminal protein myristoylation	1.40E-03
39	GO:0006955: immune response	1.49E-03
40	GO:0046470: phosphatidylcholine metabolic process	1.49E-03
41	GO:0006875: cellular metal ion homeostasis	1.72E-03
42	GO:0006303: double-strand break repair via nonhomologous end joining	1.96E-03
43	GO:0009880: embryonic pattern specification	1.96E-03
44	GO:0009051: pentose-phosphate shunt, oxidative branch	2.21E-03
45	GO:0046777: protein autophosphorylation	2.22E-03
46	GO:0071577: zinc II ion transmembrane transport	2.48E-03
47	GO:0051453: regulation of intracellular pH	2.48E-03
48	GO:0000723: telomere maintenance	2.48E-03
49	GO:0042761: very long-chain fatty acid biosynthetic process	2.48E-03
50	GO:0006486: protein glycosylation	2.75E-03
51	GO:0030148: sphingolipid biosynthetic process	3.03E-03
52	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	3.32E-03
53	GO:0000266: mitochondrial fission	3.32E-03
54	GO:0006108: malate metabolic process	3.63E-03
55	GO:0018105: peptidyl-serine phosphorylation	4.00E-03
56	GO:0009742: brassinosteroid mediated signaling pathway	4.12E-03
57	GO:0016310: phosphorylation	4.14E-03
58	GO:0010030: positive regulation of seed germination	4.26E-03
59	GO:0070588: calcium ion transmembrane transport	4.26E-03
60	GO:0007031: peroxisome organization	4.26E-03
61	GO:0051260: protein homooligomerization	5.62E-03
62	GO:0061077: chaperone-mediated protein folding	5.62E-03
63	GO:0006012: galactose metabolic process	6.35E-03
64	GO:0042147: retrograde transport, endosome to Golgi	7.11E-03
65	GO:0035556: intracellular signal transduction	7.38E-03
66	GO:0000413: protein peptidyl-prolyl isomerization	7.51E-03
67	GO:0010087: phloem or xylem histogenesis	7.51E-03
68	GO:0010118: stomatal movement	7.51E-03
69	GO:0046686: response to cadmium ion	7.61E-03
70	GO:0006470: protein dephosphorylation	7.66E-03
71	GO:0048544: recognition of pollen	8.32E-03
72	GO:0006814: sodium ion transport	8.32E-03
73	GO:0019252: starch biosynthetic process	8.74E-03
74	GO:0006891: intra-Golgi vesicle-mediated transport	9.16E-03
75	GO:0002229: defense response to oomycetes	9.16E-03
76	GO:0007264: small GTPase mediated signal transduction	9.60E-03
77	GO:0006914: autophagy	1.05E-02
78	GO:0006310: DNA recombination	1.05E-02
79	GO:0071805: potassium ion transmembrane transport	1.09E-02
80	GO:0009816: defense response to bacterium, incompatible interaction	1.23E-02
81	GO:0006950: response to stress	1.33E-02
82	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.33E-02
83	GO:0016049: cell growth	1.38E-02
84	GO:0006886: intracellular protein transport	1.59E-02
85	GO:0048527: lateral root development	1.59E-02
86	GO:0016051: carbohydrate biosynthetic process	1.69E-02
87	GO:0042742: defense response to bacterium	1.69E-02
88	GO:0009867: jasmonic acid mediated signaling pathway	1.69E-02
89	GO:0006099: tricarboxylic acid cycle	1.75E-02
90	GO:0030001: metal ion transport	1.86E-02
91	GO:0006897: endocytosis	1.91E-02
92	GO:0009736: cytokinin-activated signaling pathway	2.51E-02
93	GO:0010224: response to UV-B	2.57E-02
94	GO:0006096: glycolytic process	2.82E-02
95	GO:0009626: plant-type hypersensitive response	2.96E-02
96	GO:0007165: signal transduction	4.21E-02
97	GO:0009790: embryo development	4.22E-02
98	GO:0055085: transmembrane transport	4.28E-02
99	GO:0006633: fatty acid biosynthetic process	4.45E-02

Rank	GO Term	Adjusted P value
1	GO:0033749: histone demethylase activity (H4-R3 specific)	0.00E+00
2	GO:0017017: MAP kinase tyrosine/serine/threonine phosphatase activity	0.00E+00
3	GO:0004846: urate oxidase activity	0.00E+00
4	GO:0033746: histone demethylase activity (H3-R2 specific)	0.00E+00
5	GO:0016301: kinase activity	1.83E-09
6	GO:0005524: ATP binding	1.69E-08
7	GO:0004674: protein serine/threonine kinase activity	2.21E-06
8	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	9.14E-05
9	GO:0032050: clathrin heavy chain binding	9.14E-05
10	GO:0015085: calcium ion transmembrane transporter activity	9.14E-05
11	GO:0004713: protein tyrosine kinase activity	1.13E-04
12	GO:0045140: inositol phosphoceramide synthase activity	2.16E-04
13	GO:0004473: malate dehydrogenase (decarboxylating) (NADP+) activity	3.61E-04
14	GO:0005516: calmodulin binding	5.12E-04
15	GO:0016652: oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor	6.90E-04
16	GO:0004471: malate dehydrogenase (decarboxylating) (NAD+) activity	6.90E-04
17	GO:0004470: malic enzyme activity	6.90E-04
18	GO:0008948: oxaloacetate decarboxylase activity	8.73E-04
19	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	8.73E-04
20	GO:0017137: Rab GTPase binding	8.73E-04
21	GO:0004040: amidase activity	8.73E-04
22	GO:0015081: sodium ion transmembrane transporter activity	1.07E-03
23	GO:0009931: calcium-dependent protein serine/threonine kinase activity	1.09E-03
24	GO:0004683: calmodulin-dependent protein kinase activity	1.15E-03
25	GO:0004012: phospholipid-translocating ATPase activity	1.27E-03
26	GO:0004747: ribokinase activity	1.27E-03
27	GO:0005096: GTPase activator activity	1.33E-03
28	GO:0008143: poly(A) binding	1.49E-03
29	GO:0042162: telomeric DNA binding	1.49E-03
30	GO:0004672: protein kinase activity	1.68E-03
31	GO:0004714: transmembrane receptor protein tyrosine kinase activity	1.72E-03
32	GO:0004034: aldose 1-epimerase activity	1.72E-03
33	GO:0008865: fructokinase activity	1.72E-03
34	GO:0004630: phospholipase D activity	1.96E-03
35	GO:0005267: potassium channel activity	1.96E-03
36	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	1.96E-03
37	GO:0008417: fucosyltransferase activity	2.21E-03
38	GO:0004003: ATP-dependent DNA helicase activity	2.21E-03
39	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	2.38E-03
40	GO:0030955: potassium ion binding	2.48E-03
41	GO:0004743: pyruvate kinase activity	2.48E-03
42	GO:0015386: potassium:proton antiporter activity	3.03E-03
43	GO:0005509: calcium ion binding	3.44E-03
44	GO:0004022: alcohol dehydrogenase (NAD) activity	3.63E-03
45	GO:0005388: calcium-transporting ATPase activity	3.63E-03
46	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	3.63E-03
47	GO:0004725: protein tyrosine phosphatase activity	4.58E-03
48	GO:0005385: zinc ion transmembrane transporter activity	4.92E-03
49	GO:0043130: ubiquitin binding	4.92E-03
50	GO:0005528: FK506 binding	4.92E-03
51	GO:0033612: receptor serine/threonine kinase binding	5.62E-03
52	GO:0035251: UDP-glucosyltransferase activity	5.62E-03
53	GO:0046873: metal ion transmembrane transporter activity	7.91E-03
54	GO:0016853: isomerase activity	8.32E-03
55	GO:0015385: sodium:proton antiporter activity	1.00E-02
56	GO:0030246: carbohydrate binding	1.01E-02
57	GO:0000287: magnesium ion binding	1.02E-02
58	GO:0003684: damaged DNA binding	1.05E-02
59	GO:0051213: dioxygenase activity	1.19E-02
60	GO:0005525: GTP binding	1.30E-02
61	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.69E-02
62	GO:0000987: core promoter proximal region sequence-specific DNA binding	1.75E-02
63	GO:0004712: protein serine/threonine/tyrosine kinase activity	1.80E-02
64	GO:0003924: GTPase activity	1.91E-02
65	GO:0005198: structural molecule activity	2.20E-02
66	GO:0051287: NAD binding	2.32E-02
67	GO:0003690: double-stranded DNA binding	2.57E-02
68	GO:0008234: cysteine-type peptidase activity	2.70E-02
69	GO:0016887: ATPase activity	2.95E-02
70	GO:0016746: transferase activity, transferring acyl groups	3.29E-02
71	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	3.85E-02
72	GO:0015144: carbohydrate transmembrane transporter activity	4.30E-02
73	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	4.52E-02
74	GO:0005351: sugar:proton symporter activity	4.68E-02
75	GO:0008017: microtubule binding	4.91E-02

Rank	GO Term	Adjusted P value
1	GO:0008305: integrin complex	0.00E+00
2	GO:0005886: plasma membrane	3.61E-12
3	GO:0043564: Ku70:Ku80 complex	9.14E-05
4	GO:0045252: oxoglutarate dehydrogenase complex	9.14E-05
5	GO:0030125: clathrin vesicle coat	1.13E-04
6	GO:0005794: Golgi apparatus	3.78E-04
7	GO:0005802: trans-Golgi network	5.72E-04
8	GO:0005768: endosome	7.18E-04
9	GO:0032580: Golgi cisterna membrane	8.34E-04
10	GO:0016021: integral component of membrane	9.80E-04
11	GO:0030131: clathrin adaptor complex	1.72E-03
12	GO:0000784: nuclear chromosome, telomeric region	1.96E-03
13	GO:0010494: cytoplasmic stress granule	2.21E-03
14	GO:0005783: endoplasmic reticulum	2.75E-03
15	GO:0048471: perinuclear region of cytoplasm	3.03E-03
16	GO:0010008: endosome membrane	3.34E-03
17	GO:0043234: protein complex	4.58E-03
18	GO:0005829: cytosol	5.42E-03
19	GO:0005905: clathrin-coated pit	5.62E-03
20	GO:0000325: plant-type vacuole	1.59E-02
21	GO:0031902: late endosome membrane	1.91E-02
22	GO:0000139: Golgi membrane	2.47E-02
23	GO:0005774: vacuolar membrane	2.52E-02
24	GO:0005789: endoplasmic reticulum membrane	2.87E-02
25	GO:0012505: endomembrane system	3.16E-02
26	GO:0005737: cytoplasm	3.74E-02
27	GO:0009524: phragmoplast	3.93E-02
28	GO:0005773: vacuole	4.69E-02