co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G19250

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0080053: response to phenylalanine	0.00E+00
2	GO:0046865: terpenoid transport	0.00E+00
3	GO:0006793: phosphorus metabolic process	0.00E+00
4	GO:0051238: sequestering of metal ion	0.00E+00
5	GO:0006182: cGMP biosynthetic process	0.00E+00
6	GO:0006592: ornithine biosynthetic process	0.00E+00
7	GO:0080169: cellular response to boron-containing substance deprivation	0.00E+00
8	GO:0010055: atrichoblast differentiation	0.00E+00
9	GO:0043201: response to leucine	0.00E+00
10	GO:0043620: regulation of DNA-templated transcription in response to stress	0.00E+00
11	GO:0080052: response to histidine	0.00E+00
12	GO:0042742: defense response to bacterium	1.51E-06
13	GO:0006468: protein phosphorylation	2.05E-06
14	GO:0009617: response to bacterium	3.40E-06
15	GO:0006874: cellular calcium ion homeostasis	1.60E-05
16	GO:0010120: camalexin biosynthetic process	2.85E-05
17	GO:0009682: induced systemic resistance	8.37E-05
18	GO:0009636: response to toxic substance	9.20E-05
19	GO:0006536: glutamate metabolic process	1.11E-04
20	GO:0010200: response to chitin	1.33E-04
21	GO:0006952: defense response	1.34E-04
22	GO:0009620: response to fungus	2.30E-04
23	GO:0002238: response to molecule of fungal origin	2.44E-04
24	GO:0009817: defense response to fungus, incompatible interaction	2.51E-04
25	GO:0009407: toxin catabolic process	2.95E-04
26	GO:0009751: response to salicylic acid	3.13E-04
27	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	3.27E-04
28	GO:0071456: cellular response to hypoxia	3.56E-04
29	GO:1901183: positive regulation of camalexin biosynthetic process	4.37E-04
30	GO:0042759: long-chain fatty acid biosynthetic process	4.37E-04
31	GO:0032107: regulation of response to nutrient levels	4.37E-04
32	GO:0051938: L-glutamate import	4.37E-04
33	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	4.37E-04
34	GO:0010726: positive regulation of hydrogen peroxide metabolic process	4.37E-04
35	GO:0010421: hydrogen peroxide-mediated programmed cell death	4.37E-04
36	GO:0006855: drug transmembrane transport	7.00E-04
37	GO:0010150: leaf senescence	7.50E-04
38	GO:0010193: response to ozone	7.90E-04
39	GO:0044419: interspecies interaction between organisms	9.44E-04
40	GO:0043066: negative regulation of apoptotic process	9.44E-04
41	GO:0006423: cysteinyl-tRNA aminoacylation	9.44E-04
42	GO:0030003: cellular cation homeostasis	9.44E-04
43	GO:0042939: tripeptide transport	9.44E-04
44	GO:0043091: L-arginine import	9.44E-04
45	GO:0051592: response to calcium ion	9.44E-04
46	GO:0080183: response to photooxidative stress	9.44E-04
47	GO:0015802: basic amino acid transport	9.44E-04
48	GO:0009805: coumarin biosynthetic process	9.44E-04
49	GO:0009866: induced systemic resistance, ethylene mediated signaling pathway	9.44E-04
50	GO:0006032: chitin catabolic process	1.06E-03
51	GO:0032259: methylation	1.16E-03
52	GO:0006790: sulfur compound metabolic process	1.39E-03
53	GO:0012501: programmed cell death	1.39E-03
54	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	1.54E-03
55	GO:0034051: negative regulation of plant-type hypersensitive response	1.54E-03
56	GO:0010351: lithium ion transport	1.54E-03
57	GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway	1.54E-03
58	GO:0015692: lead ion transport	1.54E-03
59	GO:0080168: abscisic acid transport	1.54E-03
60	GO:1900055: regulation of leaf senescence	1.54E-03
61	GO:0046854: phosphatidylinositol phosphorylation	2.00E-03
62	GO:0010731: protein glutathionylation	2.22E-03
63	GO:0006882: cellular zinc ion homeostasis	2.22E-03
64	GO:0046513: ceramide biosynthetic process	2.22E-03
65	GO:0046836: glycolipid transport	2.22E-03
66	GO:0010116: positive regulation of abscisic acid biosynthetic process	2.22E-03
67	GO:0019438: aromatic compound biosynthetic process	2.22E-03
68	GO:0033169: histone H3-K9 demethylation	2.22E-03
69	GO:0070301: cellular response to hydrogen peroxide	2.22E-03
70	GO:0042938: dipeptide transport	2.99E-03
71	GO:0045227: capsule polysaccharide biosynthetic process	2.99E-03
72	GO:0045088: regulation of innate immune response	2.99E-03
73	GO:0033358: UDP-L-arabinose biosynthetic process	2.99E-03
74	GO:1901002: positive regulation of response to salt stress	2.99E-03
75	GO:0033356: UDP-L-arabinose metabolic process	2.99E-03
76	GO:0003333: amino acid transmembrane transport	3.00E-03
77	GO:0016998: cell wall macromolecule catabolic process	3.00E-03
78	GO:0051707: response to other organism	3.29E-03
79	GO:0030041: actin filament polymerization	3.83E-03
80	GO:0034052: positive regulation of plant-type hypersensitive response	3.83E-03
81	GO:0000304: response to singlet oxygen	3.83E-03
82	GO:0042538: hyperosmotic salinity response	4.40E-03
83	GO:0006561: proline biosynthetic process	4.74E-03
84	GO:0010942: positive regulation of cell death	4.74E-03
85	GO:0015691: cadmium ion transport	4.74E-03
86	GO:0010256: endomembrane system organization	4.74E-03
87	GO:0006555: methionine metabolic process	4.74E-03
88	GO:0009809: lignin biosynthetic process	4.81E-03
89	GO:0048544: recognition of pollen	5.29E-03
90	GO:0010555: response to mannitol	5.72E-03
91	GO:2000067: regulation of root morphogenesis	5.72E-03
92	GO:0019509: L-methionine salvage from methylthioadenosine	5.72E-03
93	GO:0002229: defense response to oomycetes	6.08E-03
94	GO:0030026: cellular manganese ion homeostasis	6.76E-03
95	GO:0050829: defense response to Gram-negative bacterium	6.76E-03
96	GO:1900057: positive regulation of leaf senescence	6.76E-03
97	GO:0000122: negative regulation of transcription from RNA polymerase II promoter	6.76E-03
98	GO:1902074: response to salt	6.76E-03
99	GO:1900056: negative regulation of leaf senescence	6.76E-03
100	GO:0019745: pentacyclic triterpenoid biosynthetic process	6.76E-03
101	GO:0010252: auxin homeostasis	7.38E-03
102	GO:0009850: auxin metabolic process	7.86E-03
103	GO:0043068: positive regulation of programmed cell death	7.86E-03
104	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	7.86E-03
105	GO:0030091: protein repair	7.86E-03
106	GO:0051607: defense response to virus	8.32E-03
107	GO:0009615: response to virus	8.82E-03
108	GO:0010497: plasmodesmata-mediated intercellular transport	9.03E-03
109	GO:0006526: arginine biosynthetic process	9.03E-03
110	GO:0009699: phenylpropanoid biosynthetic process	9.03E-03
111	GO:0007186: G-protein coupled receptor signaling pathway	9.03E-03
112	GO:0050832: defense response to fungus	1.01E-02
113	GO:0010112: regulation of systemic acquired resistance	1.03E-02
114	GO:0009056: catabolic process	1.03E-02
115	GO:0009821: alkaloid biosynthetic process	1.03E-02
116	GO:0051865: protein autoubiquitination	1.03E-02
117	GO:0007165: signal transduction	1.06E-02
118	GO:0009737: response to abscisic acid	1.11E-02
119	GO:0008219: cell death	1.15E-02
120	GO:2000280: regulation of root development	1.15E-02
121	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	1.15E-02
122	GO:0006499: N-terminal protein myristoylation	1.27E-02
123	GO:0007064: mitotic sister chromatid cohesion	1.29E-02
124	GO:0009688: abscisic acid biosynthetic process	1.29E-02
125	GO:0055062: phosphate ion homeostasis	1.29E-02
126	GO:0009089: lysine biosynthetic process via diaminopimelate	1.43E-02
127	GO:0009073: aromatic amino acid family biosynthetic process	1.43E-02
128	GO:0009750: response to fructose	1.43E-02
129	GO:0006816: calcium ion transport	1.43E-02
130	GO:0002213: defense response to insect	1.57E-02
131	GO:0006626: protein targeting to mitochondrion	1.72E-02
132	GO:0055046: microgametogenesis	1.72E-02
133	GO:0009718: anthocyanin-containing compound biosynthetic process	1.72E-02
134	GO:0006631: fatty acid metabolic process	1.75E-02
135	GO:0007166: cell surface receptor signaling pathway	1.80E-02
136	GO:0009753: response to jasmonic acid	1.86E-02
137	GO:0010143: cutin biosynthetic process	1.87E-02
138	GO:0070588: calcium ion transmembrane transport	2.03E-02
139	GO:0009225: nucleotide-sugar metabolic process	2.03E-02
140	GO:0010025: wax biosynthetic process	2.20E-02
141	GO:0030150: protein import into mitochondrial matrix	2.36E-02
142	GO:0080147: root hair cell development	2.36E-02
143	GO:2000377: regulation of reactive oxygen species metabolic process	2.36E-02
144	GO:0005992: trehalose biosynthetic process	2.36E-02
145	GO:0006812: cation transport	2.38E-02
146	GO:0055114: oxidation-reduction process	2.40E-02
147	GO:0009695: jasmonic acid biosynthetic process	2.54E-02
148	GO:0031408: oxylipin biosynthetic process	2.71E-02
149	GO:0030433: ubiquitin-dependent ERAD pathway	2.89E-02
150	GO:0019748: secondary metabolic process	2.89E-02
151	GO:0010227: floral organ abscission	3.08E-02
152	GO:0006012: galactose metabolic process	3.08E-02
153	GO:0009723: response to ethylene	3.16E-02
154	GO:0009561: megagametogenesis	3.27E-02
155	GO:0010584: pollen exine formation	3.27E-02
156	GO:0080167: response to karrikin	3.45E-02
157	GO:0046686: response to cadmium ion	3.58E-02
158	GO:0016310: phosphorylation	3.61E-02
159	GO:0006885: regulation of pH	3.86E-02
160	GO:0009611: response to wounding	4.02E-02
161	GO:0006814: sodium ion transport	4.06E-02
162	GO:0006979: response to oxidative stress	4.23E-02
163	GO:0009749: response to glucose	4.27E-02
164	GO:0009851: auxin biosynthetic process	4.27E-02
165	GO:0006623: protein targeting to vacuole	4.27E-02
166	GO:0009845: seed germination	4.90E-02

Rank	GO Term	Adjusted P value
1	GO:0008843: endochitinase activity	0.00E+00
2	GO:0016312: inositol bisphosphate phosphatase activity	0.00E+00
3	GO:0008777: acetylornithine deacetylase activity	0.00E+00
4	GO:0035885: exochitinase activity	0.00E+00
5	GO:0047720: indoleacetaldoxime dehydratase activity	0.00E+00
6	GO:0016301: kinase activity	1.50E-09
7	GO:0004674: protein serine/threonine kinase activity	5.83E-08
8	GO:0005524: ATP binding	3.06E-06
9	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	2.92E-05
10	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	3.23E-05
11	GO:0004351: glutamate decarboxylase activity	6.33E-05
12	GO:0008171: O-methyltransferase activity	6.64E-05
13	GO:0010279: indole-3-acetic acid amido synthetase activity	1.11E-04
14	GO:0005496: steroid binding	1.71E-04
15	GO:0005217: intracellular ligand-gated ion channel activity	1.78E-04
16	GO:0004970: ionotropic glutamate receptor activity	1.78E-04
17	GO:0030145: manganese ion binding	3.19E-04
18	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	3.27E-04
19	GO:0102391: decanoate--CoA ligase activity	3.27E-04
20	GO:0004467: long-chain fatty acid-CoA ligase activity	4.22E-04
21	GO:0004321: fatty-acyl-CoA synthase activity	4.37E-04
22	GO:0031957: very long-chain fatty acid-CoA ligase activity	4.37E-04
23	GO:0019707: protein-cysteine S-acyltransferase activity	4.37E-04
24	GO:0010285: L,L-diaminopimelate aminotransferase activity	4.37E-04
25	GO:0004364: glutathione transferase activity	5.19E-04
26	GO:0003849: 3-deoxy-7-phosphoheptulonate synthase activity	9.44E-04
27	GO:0050736: O-malonyltransferase activity	9.44E-04
28	GO:0042937: tripeptide transporter activity	9.44E-04
29	GO:0032454: histone demethylase activity (H3-K9 specific)	9.44E-04
30	GO:0004776: succinate-CoA ligase (GDP-forming) activity	9.44E-04
31	GO:0004103: choline kinase activity	9.44E-04
32	GO:0050291: sphingosine N-acyltransferase activity	9.44E-04
33	GO:0010297: heteropolysaccharide binding	9.44E-04
34	GO:0004817: cysteine-tRNA ligase activity	9.44E-04
35	GO:0004775: succinate-CoA ligase (ADP-forming) activity	9.44E-04
36	GO:0045735: nutrient reservoir activity	1.12E-03
37	GO:0009055: electron carrier activity	1.45E-03
38	GO:0031683: G-protein beta/gamma-subunit complex binding	1.54E-03
39	GO:0004383: guanylate cyclase activity	1.54E-03
40	GO:0016805: dipeptidase activity	1.54E-03
41	GO:0001664: G-protein coupled receptor binding	1.54E-03
42	GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity	1.54E-03
43	GO:0042409: caffeoyl-CoA O-methyltransferase activity	1.54E-03
44	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	1.65E-03
45	GO:0015238: drug transmembrane transporter activity	1.87E-03
46	GO:0050660: flavin adenine dinucleotide binding	2.09E-03
47	GO:0042299: lupeol synthase activity	2.22E-03
48	GO:0010178: IAA-amino acid conjugate hydrolase activity	2.22E-03
49	GO:0015189: L-lysine transmembrane transporter activity	2.22E-03
50	GO:0017089: glycolipid transporter activity	2.22E-03
51	GO:0015181: arginine transmembrane transporter activity	2.22E-03
52	GO:0030246: carbohydrate binding	2.26E-03
53	GO:0004031: aldehyde oxidase activity	2.99E-03
54	GO:0016866: intramolecular transferase activity	2.99E-03
55	GO:0050302: indole-3-acetaldehyde oxidase activity	2.99E-03
56	GO:0009916: alternative oxidase activity	2.99E-03
57	GO:0015368: calcium:cation antiporter activity	2.99E-03
58	GO:0050373: UDP-arabinose 4-epimerase activity	2.99E-03
59	GO:0042936: dipeptide transporter activity	2.99E-03
60	GO:0051861: glycolipid binding	2.99E-03
61	GO:0015369: calcium:proton antiporter activity	2.99E-03
62	GO:0005313: L-glutamate transmembrane transporter activity	2.99E-03
63	GO:0004040: amidase activity	3.83E-03
64	GO:0015301: anion:anion antiporter activity	3.83E-03
65	GO:0005452: inorganic anion exchanger activity	3.83E-03
66	GO:0004866: endopeptidase inhibitor activity	4.74E-03
67	GO:0047714: galactolipase activity	4.74E-03
68	GO:0005261: cation channel activity	5.72E-03
69	GO:0003978: UDP-glucose 4-epimerase activity	5.72E-03
70	GO:0004656: procollagen-proline 4-dioxygenase activity	5.72E-03
71	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	5.72E-03
72	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	5.72E-03
73	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	5.72E-03
74	GO:0005085: guanyl-nucleotide exchange factor activity	6.76E-03
75	GO:0008235: metalloexopeptidase activity	6.76E-03
76	GO:0008237: metallopeptidase activity	7.84E-03
77	GO:0052747: sinapyl alcohol dehydrogenase activity	7.86E-03
78	GO:0004033: aldo-keto reductase (NADP) activity	7.86E-03
79	GO:0015491: cation:cation antiporter activity	7.86E-03
80	GO:0004714: transmembrane receptor protein tyrosine kinase activity	7.86E-03
81	GO:0004564: beta-fructofuranosidase activity	7.86E-03
82	GO:0008970: phosphatidylcholine 1-acylhydrolase activity	9.03E-03
83	GO:0016207: 4-coumarate-CoA ligase activity	1.03E-02
84	GO:0030247: polysaccharide binding	1.04E-02
85	GO:0030170: pyridoxal phosphate binding	1.15E-02
86	GO:0031490: chromatin DNA binding	1.15E-02
87	GO:0016844: strictosidine synthase activity	1.15E-02
88	GO:0004575: sucrose alpha-glucosidase activity	1.15E-02
89	GO:0015174: basic amino acid transmembrane transporter activity	1.15E-02
90	GO:0004568: chitinase activity	1.29E-02
91	GO:0004177: aminopeptidase activity	1.43E-02
92	GO:0008559: xenobiotic-transporting ATPase activity	1.43E-02
93	GO:0015297: antiporter activity	1.43E-02
94	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.47E-02
95	GO:0046872: metal ion binding	1.55E-02
96	GO:0000976: transcription regulatory region sequence-specific DNA binding	1.57E-02
97	GO:0045551: cinnamyl-alcohol dehydrogenase activity	1.57E-02
98	GO:0015266: protein channel activity	1.72E-02
99	GO:0004022: alcohol dehydrogenase (NAD) activity	1.72E-02
100	GO:0005262: calcium channel activity	1.72E-02
101	GO:0015114: phosphate ion transmembrane transporter activity	1.72E-02
102	GO:0005388: calcium-transporting ATPase activity	1.72E-02
103	GO:0008061: chitin binding	2.03E-02
104	GO:0051537: 2 iron, 2 sulfur cluster binding	2.05E-02
105	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	2.06E-02
106	GO:0001046: core promoter sequence-specific DNA binding	2.36E-02
107	GO:0031418: L-ascorbic acid binding	2.36E-02
108	GO:0008168: methyltransferase activity	2.51E-02
109	GO:0005516: calmodulin binding	2.56E-02
110	GO:0019706: protein-cysteine S-palmitoyltransferase activity	2.71E-02
111	GO:0015171: amino acid transmembrane transporter activity	2.83E-02
112	GO:0005451: monovalent cation:proton antiporter activity	3.66E-02
113	GO:0005509: calcium ion binding	3.66E-02
114	GO:0015035: protein disulfide oxidoreductase activity	3.74E-02
115	GO:0005199: structural constituent of cell wall	3.86E-02
116	GO:0008080: N-acetyltransferase activity	3.86E-02
117	GO:0052689: carboxylic ester hydrolase activity	3.90E-02
118	GO:0015299: solute:proton antiporter activity	4.06E-02
119	GO:0015385: sodium:proton antiporter activity	4.91E-02

Rank	GO Term	Adjusted P value
1	GO:0016021: integral component of membrane	4.81E-10
2	GO:0005886: plasma membrane	1.05E-09
3	GO:0000138: Golgi trans cisterna	4.37E-04
4	GO:0005911: cell-cell junction	4.37E-04
5	GO:0009530: primary cell wall	1.54E-03
6	GO:0070062: extracellular exosome	2.22E-03
7	GO:0005576: extracellular region	2.51E-03
8	GO:0032588: trans-Golgi network membrane	4.74E-03
9	GO:0005770: late endosome	4.92E-03
10	GO:0031305: integral component of mitochondrial inner membrane	7.86E-03
11	GO:0005783: endoplasmic reticulum	9.11E-03
12	GO:0000325: plant-type vacuole	1.34E-02
13	GO:0005578: proteinaceous extracellular matrix	1.72E-02
14	GO:0031012: extracellular matrix	1.72E-02
15	GO:0005829: cytosol	2.18E-02
16	GO:0005769: early endosome	2.20E-02
17	GO:0070469: respiratory chain	2.54E-02
18	GO:0005744: mitochondrial inner membrane presequence translocase complex	3.27E-02
19	GO:0048046: apoplast	3.68E-02
20	GO:0000785: chromatin	4.69E-02
21	GO:0000145: exocyst	4.69E-02
22	GO:0071944: cell periphery	4.91E-02