co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G18910

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0046109: uridine biosynthetic process	0.00E+00
2	GO:0002376: immune system process	0.00E+00
3	GO:0006983: ER overload response	0.00E+00
4	GO:0048227: plasma membrane to endosome transport	0.00E+00
5	GO:0010499: proteasomal ubiquitin-independent protein catabolic process	0.00E+00
6	GO:0006182: cGMP biosynthetic process	0.00E+00
7	GO:0072722: response to amitrole	0.00E+00
8	GO:0006592: ornithine biosynthetic process	0.00E+00
9	GO:0006468: protein phosphorylation	2.76E-09
10	GO:0010150: leaf senescence	8.36E-08
11	GO:0006499: N-terminal protein myristoylation	7.61E-05
12	GO:0006952: defense response	1.21E-04
13	GO:0009751: response to salicylic acid	2.47E-04
14	GO:0009617: response to bacterium	2.47E-04
15	GO:1990022: RNA polymerase III complex localization to nucleus	2.57E-04
16	GO:0044376: RNA polymerase II complex import to nucleus	2.57E-04
17	GO:0010230: alternative respiration	2.57E-04
18	GO:0046244: salicylic acid catabolic process	2.57E-04
19	GO:0010265: SCF complex assembly	2.57E-04
20	GO:0034975: protein folding in endoplasmic reticulum	2.57E-04
21	GO:0042742: defense response to bacterium	2.69E-04
22	GO:0009821: alkaloid biosynthetic process	3.60E-04
23	GO:0009620: response to fungus	3.94E-04
24	GO:0009615: response to virus	4.74E-04
25	GO:0043069: negative regulation of programmed cell death	4.99E-04
26	GO:0051645: Golgi localization	5.68E-04
27	GO:0043066: negative regulation of apoptotic process	5.68E-04
28	GO:0006423: cysteinyl-tRNA aminoacylation	5.68E-04
29	GO:1902000: homogentisate catabolic process	5.68E-04
30	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	5.68E-04
31	GO:0060151: peroxisome localization	5.68E-04
32	GO:0019441: tryptophan catabolic process to kynurenine	5.68E-04
33	GO:0015914: phospholipid transport	5.68E-04
34	GO:0002237: response to molecule of bacterial origin	8.40E-04
35	GO:0010272: response to silver ion	9.22E-04
36	GO:0009072: aromatic amino acid family metabolic process	9.22E-04
37	GO:1900055: regulation of leaf senescence	9.22E-04
38	GO:0051646: mitochondrion localization	9.22E-04
39	GO:0000289: nuclear-transcribed mRNA poly(A) tail shortening	9.22E-04
40	GO:1900140: regulation of seedling development	9.22E-04
41	GO:0010359: regulation of anion channel activity	9.22E-04
42	GO:0090436: leaf pavement cell development	9.22E-04
43	GO:2000377: regulation of reactive oxygen species metabolic process	1.15E-03
44	GO:0007166: cell surface receptor signaling pathway	1.27E-03
45	GO:0002239: response to oomycetes	1.32E-03
46	GO:0009052: pentose-phosphate shunt, non-oxidative branch	1.32E-03
47	GO:0001676: long-chain fatty acid metabolic process	1.32E-03
48	GO:0010116: positive regulation of abscisic acid biosynthetic process	1.32E-03
49	GO:0019438: aromatic compound biosynthetic process	1.32E-03
50	GO:0048194: Golgi vesicle budding	1.32E-03
51	GO:0071456: cellular response to hypoxia	1.52E-03
52	GO:0006012: galactose metabolic process	1.65E-03
53	GO:0060548: negative regulation of cell death	1.76E-03
54	GO:0080142: regulation of salicylic acid biosynthetic process	1.76E-03
55	GO:0030308: negative regulation of cell growth	2.25E-03
56	GO:0009697: salicylic acid biosynthetic process	2.25E-03
57	GO:0046283: anthocyanin-containing compound metabolic process	2.25E-03
58	GO:0006461: protein complex assembly	2.25E-03
59	GO:0009646: response to absence of light	2.43E-03
60	GO:1902456: regulation of stomatal opening	2.77E-03
61	GO:1900425: negative regulation of defense response to bacterium	2.77E-03
62	GO:0002238: response to molecule of fungal origin	2.77E-03
63	GO:0000302: response to reactive oxygen species	2.79E-03
64	GO:0010200: response to chitin	2.95E-03
65	GO:0007264: small GTPase mediated signal transduction	2.98E-03
66	GO:0009738: abscisic acid-activated signaling pathway	3.04E-03
67	GO:0071470: cellular response to osmotic stress	3.33E-03
68	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	3.33E-03
69	GO:0000911: cytokinesis by cell plate formation	3.33E-03
70	GO:0009612: response to mechanical stimulus	3.33E-03
71	GO:0043090: amino acid import	3.93E-03
72	GO:0006744: ubiquinone biosynthetic process	3.93E-03
73	GO:0000338: protein deneddylation	3.93E-03
74	GO:0019745: pentacyclic triterpenoid biosynthetic process	3.93E-03
75	GO:1902074: response to salt	3.93E-03
76	GO:0009816: defense response to bacterium, incompatible interaction	4.26E-03
77	GO:0009627: systemic acquired resistance	4.49E-03
78	GO:0009790: embryo development	4.52E-03
79	GO:0010928: regulation of auxin mediated signaling pathway	4.56E-03
80	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	4.56E-03
81	GO:0009819: drought recovery	4.56E-03
82	GO:1900150: regulation of defense response to fungus	4.56E-03
83	GO:0043068: positive regulation of programmed cell death	4.56E-03
84	GO:0032259: methylation	4.75E-03
85	GO:0009737: response to abscisic acid	5.10E-03
86	GO:0009699: phenylpropanoid biosynthetic process	5.22E-03
87	GO:0015996: chlorophyll catabolic process	5.22E-03
88	GO:0006526: arginine biosynthetic process	5.22E-03
89	GO:0010204: defense response signaling pathway, resistance gene-independent	5.22E-03
90	GO:0030968: endoplasmic reticulum unfolded protein response	5.22E-03
91	GO:0043562: cellular response to nitrogen levels	5.22E-03
92	GO:0017004: cytochrome complex assembly	5.22E-03
93	GO:0009808: lignin metabolic process	5.22E-03
94	GO:0006972: hyperosmotic response	5.22E-03
95	GO:0008219: cell death	5.25E-03
96	GO:0009407: toxin catabolic process	5.79E-03
97	GO:0051865: protein autoubiquitination	5.92E-03
98	GO:0010112: regulation of systemic acquired resistance	5.92E-03
99	GO:0043067: regulation of programmed cell death	6.64E-03
100	GO:0007064: mitotic sister chromatid cohesion	7.40E-03
101	GO:0000103: sulfate assimilation	7.40E-03
102	GO:0006032: chitin catabolic process	7.40E-03
103	GO:0006631: fatty acid metabolic process	7.91E-03
104	GO:0000038: very long-chain fatty acid metabolic process	8.19E-03
105	GO:0052544: defense response by callose deposition in cell wall	8.19E-03
106	GO:0000272: polysaccharide catabolic process	8.19E-03
107	GO:0030148: sphingolipid biosynthetic process	8.19E-03
108	GO:0012501: programmed cell death	9.00E-03
109	GO:0015706: nitrate transport	9.00E-03
110	GO:0030048: actin filament-based movement	9.85E-03
111	GO:0010102: lateral root morphogenesis	9.85E-03
112	GO:0006626: protein targeting to mitochondrion	9.85E-03
113	GO:2000028: regulation of photoperiodism, flowering	9.85E-03
114	GO:0048467: gynoecium development	1.07E-02
115	GO:0009846: pollen germination	1.08E-02
116	GO:0042343: indole glucosinolate metabolic process	1.16E-02
117	GO:0010167: response to nitrate	1.16E-02
118	GO:0009809: lignin biosynthetic process	1.16E-02
119	GO:0070588: calcium ion transmembrane transport	1.16E-02
120	GO:0010053: root epidermal cell differentiation	1.16E-02
121	GO:0009723: response to ethylene	1.17E-02
122	GO:0000162: tryptophan biosynthetic process	1.25E-02
123	GO:0034976: response to endoplasmic reticulum stress	1.25E-02
124	GO:0080167: response to karrikin	1.28E-02
125	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.34E-02
126	GO:0080147: root hair cell development	1.35E-02
127	GO:0006096: glycolytic process	1.37E-02
128	GO:0046777: protein autophosphorylation	1.40E-02
129	GO:0006874: cellular calcium ion homeostasis	1.45E-02
130	GO:0009695: jasmonic acid biosynthetic process	1.45E-02
131	GO:0031408: oxylipin biosynthetic process	1.55E-02
132	GO:0016998: cell wall macromolecule catabolic process	1.55E-02
133	GO:0098542: defense response to other organism	1.55E-02
134	GO:0009814: defense response, incompatible interaction	1.65E-02
135	GO:0019748: secondary metabolic process	1.65E-02
136	GO:0018105: peptidyl-serine phosphorylation	1.70E-02
137	GO:0009625: response to insect	1.76E-02
138	GO:0010227: floral organ abscission	1.76E-02
139	GO:0010584: pollen exine formation	1.86E-02
140	GO:0042631: cellular response to water deprivation	2.09E-02
141	GO:0010087: phloem or xylem histogenesis	2.09E-02
142	GO:0009058: biosynthetic process	2.19E-02
143	GO:0006662: glycerol ether metabolic process	2.20E-02
144	GO:0046323: glucose import	2.20E-02
145	GO:0009753: response to jasmonic acid	2.29E-02
146	GO:0048544: recognition of pollen	2.32E-02
147	GO:0061025: membrane fusion	2.32E-02
148	GO:0042752: regulation of circadian rhythm	2.32E-02
149	GO:0006623: protein targeting to vacuole	2.43E-02
150	GO:0009851: auxin biosynthetic process	2.43E-02
151	GO:0071554: cell wall organization or biogenesis	2.56E-02
152	GO:0002229: defense response to oomycetes	2.56E-02
153	GO:0010193: response to ozone	2.56E-02
154	GO:0009630: gravitropism	2.68E-02
155	GO:0010090: trichome morphogenesis	2.80E-02
156	GO:0006508: proteolysis	2.91E-02
157	GO:0006464: cellular protein modification process	2.93E-02
158	GO:0006904: vesicle docking involved in exocytosis	3.06E-02
159	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	3.20E-02
160	GO:0055114: oxidation-reduction process	3.31E-02
161	GO:0010468: regulation of gene expression	3.42E-02
162	GO:0009607: response to biotic stimulus	3.46E-02
163	GO:0042128: nitrate assimilation	3.59E-02
164	GO:0007165: signal transduction	3.81E-02
165	GO:0009735: response to cytokinin	3.83E-02
166	GO:0030244: cellulose biosynthetic process	4.01E-02
167	GO:0010311: lateral root formation	4.16E-02
168	GO:0048767: root hair elongation	4.16E-02
169	GO:0010119: regulation of stomatal movement	4.45E-02
170	GO:0010043: response to zinc ion	4.45E-02
171	GO:0035556: intracellular signal transduction	4.57E-02
172	GO:0006865: amino acid transport	4.60E-02
173	GO:0009867: jasmonic acid mediated signaling pathway	4.75E-02
174	GO:0016051: carbohydrate biosynthetic process	4.75E-02
175	GO:0015031: protein transport	4.87E-02
176	GO:0006099: tricarboxylic acid cycle	4.90E-02
177	GO:0034599: cellular response to oxidative stress	4.90E-02

Rank	GO Term	Adjusted P value
1	GO:0050269: coniferyl-aldehyde dehydrogenase activity	0.00E+00
2	GO:0051670: inulinase activity	0.00E+00
3	GO:0070577: lysine-acetylated histone binding	0.00E+00
4	GO:0003980: UDP-glucose:glycoprotein glucosyltransferase activity	0.00E+00
5	GO:0015591: D-ribose transmembrane transporter activity	0.00E+00
6	GO:0015575: mannitol transmembrane transporter activity	0.00E+00
7	GO:0015148: D-xylose transmembrane transporter activity	0.00E+00
8	GO:0008777: acetylornithine deacetylase activity	0.00E+00
9	GO:0016504: peptidase activator activity	0.00E+00
10	GO:0005365: myo-inositol transmembrane transporter activity	0.00E+00
11	GO:0016034: maleylacetoacetate isomerase activity	0.00E+00
12	GO:0032442: phenylcoumaran benzylic ether reductase activity	0.00E+00
13	GO:0015576: sorbitol transmembrane transporter activity	0.00E+00
14	GO:0004674: protein serine/threonine kinase activity	4.07E-10
15	GO:0016301: kinase activity	5.45E-10
16	GO:0005524: ATP binding	1.41E-07
17	GO:0102391: decanoate--CoA ligase activity	1.45E-04
18	GO:0004467: long-chain fatty acid-CoA ligase activity	1.90E-04
19	GO:0005509: calcium ion binding	2.17E-04
20	GO:0004714: transmembrane receptor protein tyrosine kinase activity	2.41E-04
21	GO:0033984: indole-3-glycerol-phosphate lyase activity	2.57E-04
22	GO:0051669: fructan beta-fructosidase activity	2.57E-04
23	GO:0004321: fatty-acyl-CoA synthase activity	2.57E-04
24	GO:0019707: protein-cysteine S-acyltransferase activity	2.57E-04
25	GO:0031219: levanase activity	2.57E-04
26	GO:0015168: glycerol transmembrane transporter activity	2.57E-04
27	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	2.57E-04
28	GO:0004743: pyruvate kinase activity	4.27E-04
29	GO:0030955: potassium ion binding	4.27E-04
30	GO:0016844: strictosidine synthase activity	4.27E-04
31	GO:0008171: O-methyltransferase activity	4.99E-04
32	GO:0005516: calmodulin binding	5.09E-04
33	GO:0004817: cysteine-tRNA ligase activity	5.68E-04
34	GO:0045140: inositol phosphoceramide synthase activity	5.68E-04
35	GO:0030742: GTP-dependent protein binding	5.68E-04
36	GO:0004061: arylformamidase activity	5.68E-04
37	GO:0043141: ATP-dependent 5'-3' DNA helicase activity	5.68E-04
38	GO:0015036: disulfide oxidoreductase activity	5.68E-04
39	GO:0004683: calmodulin-dependent protein kinase activity	5.83E-04
40	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	6.23E-04
41	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	8.93E-04
42	GO:0008430: selenium binding	9.22E-04
43	GO:0004751: ribose-5-phosphate isomerase activity	9.22E-04
44	GO:0004383: guanylate cyclase activity	9.22E-04
45	GO:0016805: dipeptidase activity	9.22E-04
46	GO:0005093: Rab GDP-dissociation inhibitor activity	9.22E-04
47	GO:0004190: aspartic-type endopeptidase activity	9.38E-04
48	GO:0004364: glutathione transferase activity	1.16E-03
49	GO:0005354: galactose transmembrane transporter activity	1.32E-03
50	GO:0042299: lupeol synthase activity	1.32E-03
51	GO:0030246: carbohydrate binding	1.49E-03
52	GO:0004737: pyruvate decarboxylase activity	1.76E-03
53	GO:0070628: proteasome binding	1.76E-03
54	GO:0016866: intramolecular transferase activity	1.76E-03
55	GO:0004834: tryptophan synthase activity	1.76E-03
56	GO:0003756: protein disulfide isomerase activity	1.80E-03
57	GO:0000287: magnesium ion binding	1.96E-03
58	GO:0015145: monosaccharide transmembrane transporter activity	2.25E-03
59	GO:0017137: Rab GTPase binding	2.25E-03
60	GO:0004040: amidase activity	2.25E-03
61	GO:0005496: steroid binding	2.25E-03
62	GO:0004029: aldehyde dehydrogenase (NAD) activity	2.77E-03
63	GO:0004866: endopeptidase inhibitor activity	2.77E-03
64	GO:0030976: thiamine pyrophosphate binding	2.77E-03
65	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	3.18E-03
66	GO:0004012: phospholipid-translocating ATPase activity	3.33E-03
67	GO:0003978: UDP-glucose 4-epimerase activity	3.33E-03
68	GO:0004656: procollagen-proline 4-dioxygenase activity	3.33E-03
69	GO:0016831: carboxy-lyase activity	3.93E-03
70	GO:0008235: metalloexopeptidase activity	3.93E-03
71	GO:0008320: protein transmembrane transporter activity	3.93E-03
72	GO:0051213: dioxygenase activity	4.03E-03
73	GO:0009931: calcium-dependent protein serine/threonine kinase activity	4.49E-03
74	GO:0004034: aldose 1-epimerase activity	4.56E-03
75	GO:0052747: sinapyl alcohol dehydrogenase activity	4.56E-03
76	GO:0030247: polysaccharide binding	4.74E-03
77	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	5.11E-03
78	GO:0016207: 4-coumarate-CoA ligase activity	5.92E-03
79	GO:0071949: FAD binding	5.92E-03
80	GO:0003678: DNA helicase activity	5.92E-03
81	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	6.64E-03
82	GO:0015112: nitrate transmembrane transporter activity	6.64E-03
83	GO:0004713: protein tyrosine kinase activity	7.40E-03
84	GO:0004568: chitinase activity	7.40E-03
85	GO:0004177: aminopeptidase activity	8.19E-03
86	GO:0045551: cinnamyl-alcohol dehydrogenase activity	9.00E-03
87	GO:0005388: calcium-transporting ATPase activity	9.85E-03
88	GO:0000175: 3'-5'-exoribonuclease activity	9.85E-03
89	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	9.85E-03
90	GO:0005262: calcium channel activity	9.85E-03
91	GO:0003774: motor activity	1.07E-02
92	GO:0004535: poly(A)-specific ribonuclease activity	1.07E-02
93	GO:0008061: chitin binding	1.16E-02
94	GO:0005217: intracellular ligand-gated ion channel activity	1.16E-02
95	GO:0004970: ionotropic glutamate receptor activity	1.16E-02
96	GO:0003954: NADH dehydrogenase activity	1.35E-02
97	GO:0031418: L-ascorbic acid binding	1.35E-02
98	GO:0061630: ubiquitin protein ligase activity	1.37E-02
99	GO:0004540: ribonuclease activity	1.55E-02
100	GO:0033612: receptor serine/threonine kinase binding	1.55E-02
101	GO:0019706: protein-cysteine S-palmitoyltransferase activity	1.55E-02
102	GO:0008408: 3'-5' exonuclease activity	1.55E-02
103	GO:0015035: protein disulfide oxidoreductase activity	1.70E-02
104	GO:0047134: protein-disulfide reductase activity	1.97E-02
105	GO:0004672: protein kinase activity	2.13E-02
106	GO:0004791: thioredoxin-disulfide reductase activity	2.32E-02
107	GO:0016853: isomerase activity	2.32E-02
108	GO:0005355: glucose transmembrane transporter activity	2.32E-02
109	GO:0008237: metallopeptidase activity	3.06E-02
110	GO:0016413: O-acetyltransferase activity	3.19E-02
111	GO:0005096: GTPase activator activity	4.16E-02
112	GO:0008168: methyltransferase activity	4.26E-02
113	GO:0030145: manganese ion binding	4.45E-02

Rank	GO Term	Adjusted P value
1	GO:0000327: lytic vacuole within protein storage vacuole	0.00E+00
2	GO:0005886: plasma membrane	2.07E-08
3	GO:0016021: integral component of membrane	1.67E-07
4	GO:0005783: endoplasmic reticulum	1.34E-06
5	GO:0005829: cytosol	4.49E-05
6	GO:0005789: endoplasmic reticulum membrane	2.25E-04
7	GO:0045252: oxoglutarate dehydrogenase complex	2.57E-04
8	GO:0030014: CCR4-NOT complex	2.57E-04
9	GO:0000138: Golgi trans cisterna	2.57E-04
10	GO:0031304: intrinsic component of mitochondrial inner membrane	5.68E-04
11	GO:0031314: extrinsic component of mitochondrial inner membrane	5.68E-04
12	GO:0030134: ER to Golgi transport vesicle	5.68E-04
13	GO:0070062: extracellular exosome	1.32E-03
14	GO:0031461: cullin-RING ubiquitin ligase complex	1.32E-03
15	GO:0030660: Golgi-associated vesicle membrane	1.76E-03
16	GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane	1.76E-03
17	GO:0005746: mitochondrial respiratory chain	2.25E-03
18	GO:0000794: condensed nuclear chromosome	3.93E-03
19	GO:0005777: peroxisome	4.10E-03
20	GO:0005788: endoplasmic reticulum lumen	4.26E-03
21	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	4.56E-03
22	GO:0000326: protein storage vacuole	5.22E-03
23	GO:0008180: COP9 signalosome	5.92E-03
24	GO:0017119: Golgi transport complex	7.40E-03
25	GO:0016459: myosin complex	7.40E-03
26	GO:0005765: lysosomal membrane	8.19E-03
27	GO:0005769: early endosome	1.25E-02
28	GO:0005794: Golgi apparatus	1.38E-02
29	GO:0005839: proteasome core complex	1.55E-02
30	GO:0016020: membrane	1.71E-02
31	GO:0009504: cell plate	2.43E-02
32	GO:0005802: trans-Golgi network	2.45E-02
33	GO:0000145: exocyst	2.68E-02
34	GO:0032580: Golgi cisterna membrane	2.93E-02
35	GO:0005773: vacuole	3.46E-02
36	GO:0000151: ubiquitin ligase complex	4.01E-02
37	GO:0005618: cell wall	4.63E-02