co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G18650

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0002184: cytoplasmic translational termination	0.00E+00
2	GO:0050732: negative regulation of peptidyl-tyrosine phosphorylation	0.00E+00
3	GO:0009773: photosynthetic electron transport in photosystem I	2.77E-05
4	GO:0016120: carotene biosynthetic process	7.79E-05
5	GO:0006086: acetyl-CoA biosynthetic process from pyruvate	1.13E-04
6	GO:0015979: photosynthesis	1.66E-04
7	GO:0010444: guard mother cell differentiation	2.04E-04
8	GO:0042335: cuticle development	2.15E-04
9	GO:0008610: lipid biosynthetic process	2.58E-04
10	GO:0070509: calcium ion import	2.70E-04
11	GO:0007263: nitric oxide mediated signal transduction	2.70E-04
12	GO:0048640: negative regulation of developmental growth	2.70E-04
13	GO:1904966: positive regulation of vitamin E biosynthetic process	2.70E-04
14	GO:1904964: positive regulation of phytol biosynthetic process	2.70E-04
15	GO:0043686: co-translational protein modification	2.70E-04
16	GO:1902458: positive regulation of stomatal opening	2.70E-04
17	GO:0071588: hydrogen peroxide mediated signaling pathway	2.70E-04
18	GO:0015936: coenzyme A metabolic process	2.70E-04
19	GO:0032544: plastid translation	3.19E-04
20	GO:0010205: photoinhibition	4.56E-04
21	GO:0010027: thylakoid membrane organization	5.15E-04
22	GO:1902326: positive regulation of chlorophyll biosynthetic process	5.94E-04
23	GO:0043255: regulation of carbohydrate biosynthetic process	5.94E-04
24	GO:0080005: photosystem stoichiometry adjustment	5.94E-04
25	GO:0010115: regulation of abscisic acid biosynthetic process	5.94E-04
26	GO:1903426: regulation of reactive oxygen species biosynthetic process	5.94E-04
27	GO:0010289: homogalacturonan biosynthetic process	5.94E-04
28	GO:0010275: NAD(P)H dehydrogenase complex assembly	5.94E-04
29	GO:0006954: inflammatory response	9.62E-04
30	GO:0090391: granum assembly	9.62E-04
31	GO:0006518: peptide metabolic process	9.62E-04
32	GO:0009825: multidimensional cell growth	9.99E-04
33	GO:0006633: fatty acid biosynthetic process	1.00E-03
34	GO:0006869: lipid transport	1.08E-03
35	GO:0006636: unsaturated fatty acid biosynthetic process	1.11E-03
36	GO:0006833: water transport	1.11E-03
37	GO:0007017: microtubule-based process	1.35E-03
38	GO:1901332: negative regulation of lateral root development	1.38E-03
39	GO:0034059: response to anoxia	1.38E-03
40	GO:0010239: chloroplast mRNA processing	1.38E-03
41	GO:0080170: hydrogen peroxide transmembrane transport	1.38E-03
42	GO:0055114: oxidation-reduction process	1.39E-03
43	GO:0031408: oxylipin biosynthetic process	1.48E-03
44	GO:0016998: cell wall macromolecule catabolic process	1.48E-03
45	GO:0055085: transmembrane transport	1.51E-03
46	GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway	1.84E-03
47	GO:0009765: photosynthesis, light harvesting	1.84E-03
48	GO:0006183: GTP biosynthetic process	1.84E-03
49	GO:0045727: positive regulation of translation	1.84E-03
50	GO:0034220: ion transmembrane transport	2.24E-03
51	GO:0006564: L-serine biosynthetic process	2.35E-03
52	GO:0045038: protein import into chloroplast thylakoid membrane	2.35E-03
53	GO:0031365: N-terminal protein amino acid modification	2.35E-03
54	GO:0006096: glycolytic process	2.40E-03
55	GO:0010182: sugar mediated signaling pathway	2.42E-03
56	GO:0006810: transport	2.63E-03
57	GO:0005975: carbohydrate metabolic process	2.83E-03
58	GO:0009913: epidermal cell differentiation	2.90E-03
59	GO:0006655: phosphatidylglycerol biosynthetic process	2.90E-03
60	GO:0010190: cytochrome b6f complex assembly	2.90E-03
61	GO:0018258: protein O-linked glycosylation via hydroxyproline	2.90E-03
62	GO:0010337: regulation of salicylic acid metabolic process	2.90E-03
63	GO:0006561: proline biosynthetic process	2.90E-03
64	GO:0010405: arabinogalactan protein metabolic process	2.90E-03
65	GO:0006751: glutathione catabolic process	2.90E-03
66	GO:0042549: photosystem II stabilization	2.90E-03
67	GO:0009735: response to cytokinin	3.09E-03
68	GO:0042372: phylloquinone biosynthetic process	3.49E-03
69	GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	3.49E-03
70	GO:1901259: chloroplast rRNA processing	3.49E-03
71	GO:0048280: vesicle fusion with Golgi apparatus	3.49E-03
72	GO:0010019: chloroplast-nucleus signaling pathway	3.49E-03
73	GO:0071555: cell wall organization	3.81E-03
74	GO:0010196: nonphotochemical quenching	4.12E-03
75	GO:1900057: positive regulation of leaf senescence	4.12E-03
76	GO:0006400: tRNA modification	4.12E-03
77	GO:0015693: magnesium ion transport	4.12E-03
78	GO:0009395: phospholipid catabolic process	4.12E-03
79	GO:0006353: DNA-templated transcription, termination	4.77E-03
80	GO:0006605: protein targeting	4.77E-03
81	GO:2000070: regulation of response to water deprivation	4.77E-03
82	GO:0015995: chlorophyll biosynthetic process	5.06E-03
83	GO:0007186: G-protein coupled receptor signaling pathway	5.47E-03
84	GO:0015996: chlorophyll catabolic process	5.47E-03
85	GO:0030244: cellulose biosynthetic process	5.61E-03
86	GO:0018298: protein-chromophore linkage	5.61E-03
87	GO:0010311: lateral root formation	5.89E-03
88	GO:0006098: pentose-phosphate shunt	6.20E-03
89	GO:0009051: pentose-phosphate shunt, oxidative branch	6.20E-03
90	GO:0042761: very long-chain fatty acid biosynthetic process	6.96E-03
91	GO:0009638: phototropism	6.96E-03
92	GO:0006896: Golgi to vacuole transport	7.75E-03
93	GO:0006032: chitin catabolic process	7.75E-03
94	GO:0009688: abscisic acid biosynthetic process	7.75E-03
95	GO:0009750: response to fructose	8.58E-03
96	GO:0000038: very long-chain fatty acid metabolic process	8.58E-03
97	GO:0016024: CDP-diacylglycerol biosynthetic process	9.44E-03
98	GO:0010152: pollen maturation	9.44E-03
99	GO:0045037: protein import into chloroplast stroma	9.44E-03
100	GO:0010102: lateral root morphogenesis	1.03E-02
101	GO:0010628: positive regulation of gene expression	1.03E-02
102	GO:0006006: glucose metabolic process	1.03E-02
103	GO:0050826: response to freezing	1.03E-02
104	GO:0009718: anthocyanin-containing compound biosynthetic process	1.03E-02
105	GO:0009725: response to hormone	1.03E-02
106	GO:0006094: gluconeogenesis	1.03E-02
107	GO:0042254: ribosome biogenesis	1.09E-02
108	GO:0010207: photosystem II assembly	1.12E-02
109	GO:0042538: hyperosmotic salinity response	1.15E-02
110	GO:0010167: response to nitrate	1.22E-02
111	GO:0007049: cell cycle	1.22E-02
112	GO:0010053: root epidermal cell differentiation	1.22E-02
113	GO:0006364: rRNA processing	1.24E-02
114	GO:0010025: wax biosynthetic process	1.32E-02
115	GO:0009833: plant-type primary cell wall biogenesis	1.32E-02
116	GO:0000027: ribosomal large subunit assembly	1.42E-02
117	GO:0009695: jasmonic acid biosynthetic process	1.52E-02
118	GO:0051302: regulation of cell division	1.52E-02
119	GO:0008299: isoprenoid biosynthetic process	1.52E-02
120	GO:0030245: cellulose catabolic process	1.73E-02
121	GO:0019722: calcium-mediated signaling	1.95E-02
122	GO:0042127: regulation of cell proliferation	1.95E-02
123	GO:0009306: protein secretion	1.95E-02
124	GO:0048443: stamen development	1.95E-02
125	GO:0042147: retrograde transport, endosome to Golgi	2.07E-02
126	GO:0016117: carotenoid biosynthetic process	2.07E-02
127	GO:0042391: regulation of membrane potential	2.19E-02
128	GO:0000413: protein peptidyl-prolyl isomerization	2.19E-02
129	GO:0042744: hydrogen peroxide catabolic process	2.53E-02
130	GO:0006623: protein targeting to vacuole	2.55E-02
131	GO:0008152: metabolic process	2.58E-02
132	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	2.68E-02
133	GO:0071554: cell wall organization or biogenesis	2.68E-02
134	GO:0000302: response to reactive oxygen species	2.68E-02
135	GO:0006891: intra-Golgi vesicle-mediated transport	2.68E-02
136	GO:0010583: response to cyclopentenone	2.81E-02
137	GO:0007623: circadian rhythm	3.06E-02
138	GO:0007267: cell-cell signaling	3.21E-02
139	GO:0001666: response to hypoxia	3.48E-02
140	GO:0016126: sterol biosynthetic process	3.48E-02
141	GO:0009734: auxin-activated signaling pathway	3.50E-02
142	GO:0010468: regulation of gene expression	3.65E-02
143	GO:0009414: response to water deprivation	3.67E-02
144	GO:0042128: nitrate assimilation	3.77E-02
145	GO:0006412: translation	3.82E-02
146	GO:0010411: xyloglucan metabolic process	3.91E-02
147	GO:0006888: ER to Golgi vesicle-mediated transport	3.91E-02
148	GO:0016311: dephosphorylation	4.06E-02
149	GO:0009817: defense response to fungus, incompatible interaction	4.21E-02
150	GO:0009832: plant-type cell wall biogenesis	4.36E-02
151	GO:0000160: phosphorelay signal transduction system	4.36E-02
152	GO:0009733: response to auxin	4.49E-02
153	GO:0009407: toxin catabolic process	4.51E-02
154	GO:0009416: response to light stimulus	4.64E-02
155	GO:0009631: cold acclimation	4.66E-02
156	GO:0009658: chloroplast organization	4.72E-02
157	GO:0016051: carbohydrate biosynthetic process	4.97E-02

Rank	GO Term	Adjusted P value
1	GO:0102344: 3-hydroxy-behenoyl-CoA dehydratase activity	0.00E+00
2	GO:0010301: xanthoxin dehydrogenase activity	0.00E+00
3	GO:0038198: auxin receptor activity	0.00E+00
4	GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity	0.00E+00
5	GO:0090471: 9,15,9'-tri-cis-zeta-carotene isomerase activity	0.00E+00
6	GO:0102345: 3-hydroxy-lignoceroyl-CoA dehydratase activity	0.00E+00
7	GO:0008756: o-succinylbenzoate-CoA ligase activity	0.00E+00
8	GO:1990534: thermospermine oxidase activity	0.00E+00
9	GO:0019146: arabinose-5-phosphate isomerase activity	0.00E+00
10	GO:0045436: lycopene beta cyclase activity	0.00E+00
11	GO:0005222: intracellular cAMP activated cation channel activity	0.00E+00
12	GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity	4.90E-05
13	GO:0019843: rRNA binding	1.03E-04
14	GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity	2.70E-04
15	GO:0042586: peptide deformylase activity	2.70E-04
16	GO:0004321: fatty-acyl-CoA synthase activity	2.70E-04
17	GO:0045485: omega-6 fatty acid desaturase activity	2.70E-04
18	GO:0005080: protein kinase C binding	2.70E-04
19	GO:0004328: formamidase activity	2.70E-04
20	GO:0005221: intracellular cyclic nucleotide activated cation channel activity	2.70E-04
21	GO:0050139: nicotinate-N-glucosyltransferase activity	2.70E-04
22	GO:0004420: hydroxymethylglutaryl-CoA reductase (NADPH) activity	2.70E-04
23	GO:0030794: (S)-coclaurine-N-methyltransferase activity	2.70E-04
24	GO:0042282: hydroxymethylglutaryl-CoA reductase activity	2.70E-04
25	GO:0008805: carbon-monoxide oxygenase activity	5.94E-04
26	GO:0000822: inositol hexakisphosphate binding	5.94E-04
27	GO:0003839: gamma-glutamylcyclotransferase activity	5.94E-04
28	GO:0004617: phosphoglycerate dehydrogenase activity	5.94E-04
29	GO:0003938: IMP dehydrogenase activity	5.94E-04
30	GO:0004565: beta-galactosidase activity	7.96E-04
31	GO:0005528: FK506 binding	1.23E-03
32	GO:0016851: magnesium chelatase activity	1.38E-03
33	GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	1.38E-03
34	GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity	1.38E-03
35	GO:0043023: ribosomal large subunit binding	1.38E-03
36	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.61E-03
37	GO:0022891: substrate-specific transmembrane transporter activity	1.76E-03
38	GO:0052793: pectin acetylesterase activity	1.84E-03
39	GO:0043495: protein anchor	1.84E-03
40	GO:0010011: auxin binding	1.84E-03
41	GO:0004345: glucose-6-phosphate dehydrogenase activity	1.84E-03
42	GO:0004045: aminoacyl-tRNA hydrolase activity	1.84E-03
43	GO:0080032: methyl jasmonate esterase activity	1.84E-03
44	GO:0016491: oxidoreductase activity	2.07E-03
45	GO:0016788: hydrolase activity, acting on ester bonds	2.30E-03
46	GO:0008289: lipid binding	2.36E-03
47	GO:0004130: cytochrome-c peroxidase activity	2.90E-03
48	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	2.90E-03
49	GO:0016208: AMP binding	2.90E-03
50	GO:0042578: phosphoric ester hydrolase activity	2.90E-03
51	GO:0016688: L-ascorbate peroxidase activity	2.90E-03
52	GO:0080030: methyl indole-3-acetate esterase activity	2.90E-03
53	GO:1990714: hydroxyproline O-galactosyltransferase activity	2.90E-03
54	GO:0004332: fructose-bisphosphate aldolase activity	2.90E-03
55	GO:0005261: cation channel activity	3.49E-03
56	GO:0005242: inward rectifier potassium channel activity	3.49E-03
57	GO:0005200: structural constituent of cytoskeleton	3.83E-03
58	GO:0016597: amino acid binding	4.06E-03
59	GO:0019899: enzyme binding	4.12E-03
60	GO:0004620: phospholipase activity	4.12E-03
61	GO:0015250: water channel activity	4.30E-03
62	GO:0016168: chlorophyll binding	4.55E-03
63	GO:0043022: ribosome binding	4.77E-03
64	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	5.47E-03
65	GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors	6.20E-03
66	GO:0016207: 4-coumarate-CoA ligase activity	6.20E-03
67	GO:0003993: acid phosphatase activity	7.44E-03
68	GO:0004568: chitinase activity	7.75E-03
69	GO:0050661: NADP binding	8.11E-03
70	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	8.25E-03
71	GO:0008081: phosphoric diester hydrolase activity	1.03E-02
72	GO:0004022: alcohol dehydrogenase (NAD) activity	1.03E-02
73	GO:0015095: magnesium ion transmembrane transporter activity	1.03E-02
74	GO:0005262: calcium channel activity	1.03E-02
75	GO:0008266: poly(U) RNA binding	1.12E-02
76	GO:0008131: primary amine oxidase activity	1.12E-02
77	GO:0008146: sulfotransferase activity	1.22E-02
78	GO:0030552: cAMP binding	1.22E-02
79	GO:0030553: cGMP binding	1.22E-02
80	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	1.32E-02
81	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	1.32E-02
82	GO:0004725: protein tyrosine phosphatase activity	1.32E-02
83	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	1.32E-02
84	GO:0005215: transporter activity	1.47E-02
85	GO:0005216: ion channel activity	1.52E-02
86	GO:0043424: protein histidine kinase binding	1.52E-02
87	GO:0052689: carboxylic ester hydrolase activity	1.58E-02
88	GO:0004707: MAP kinase activity	1.62E-02
89	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.73E-02
90	GO:0008810: cellulase activity	1.84E-02
91	GO:0016760: cellulose synthase (UDP-forming) activity	1.84E-02
92	GO:0004871: signal transducer activity	1.86E-02
93	GO:0008514: organic anion transmembrane transporter activity	1.95E-02
94	GO:0030246: carbohydrate binding	2.09E-02
95	GO:0030551: cyclic nucleotide binding	2.19E-02
96	GO:0010181: FMN binding	2.43E-02
97	GO:0050662: coenzyme binding	2.43E-02
98	GO:0004872: receptor activity	2.55E-02
99	GO:0016762: xyloglucan:xyloglucosyl transferase activity	2.68E-02
100	GO:0004518: nuclease activity	2.81E-02
101	GO:0000156: phosphorelay response regulator activity	2.94E-02
102	GO:0016759: cellulose synthase activity	3.07E-02
103	GO:0016413: O-acetyltransferase activity	3.34E-02
104	GO:0042802: identical protein binding	3.88E-02
105	GO:0030247: polysaccharide binding	3.91E-02
106	GO:0016798: hydrolase activity, acting on glycosyl bonds	3.91E-02
107	GO:0008236: serine-type peptidase activity	4.06E-02
108	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	4.21E-02
109	GO:0015238: drug transmembrane transporter activity	4.36E-02
110	GO:0005096: GTPase activator activity	4.36E-02
111	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	4.51E-02
112	GO:0004222: metalloendopeptidase activity	4.51E-02
113	GO:0008168: methyltransferase activity	4.54E-02
114	GO:0003746: translation elongation factor activity	4.97E-02

Rank	GO Term	Adjusted P value
1	GO:0010240: plastid pyruvate dehydrogenase complex	0.00E+00
2	GO:0009507: chloroplast	1.29E-19
3	GO:0009570: chloroplast stroma	1.80E-10
4	GO:0009535: chloroplast thylakoid membrane	6.04E-09
5	GO:0009941: chloroplast envelope	2.35E-08
6	GO:0009543: chloroplast thylakoid lumen	2.96E-08
7	GO:0009579: thylakoid	1.42E-07
8	GO:0031977: thylakoid lumen	1.12E-05
9	GO:0009534: chloroplast thylakoid	1.18E-05
10	GO:0016021: integral component of membrane	2.69E-04
11	GO:0009515: granal stacked thylakoid	2.70E-04
12	GO:0009923: fatty acid elongase complex	2.70E-04
13	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	3.84E-04
14	GO:0031969: chloroplast membrane	6.69E-04
15	GO:0010007: magnesium chelatase complex	9.62E-04
16	GO:0009528: plastid inner membrane	9.62E-04
17	GO:0009654: photosystem II oxygen evolving complex	1.35E-03
18	GO:0015630: microtubule cytoskeleton	1.38E-03
19	GO:0046658: anchored component of plasma membrane	1.76E-03
20	GO:0009527: plastid outer membrane	1.84E-03
21	GO:0009523: photosystem II	2.79E-03
22	GO:0019898: extrinsic component of membrane	2.79E-03
23	GO:0009533: chloroplast stromal thylakoid	4.12E-03
24	GO:0012507: ER to Golgi transport vesicle membrane	4.77E-03
25	GO:0005886: plasma membrane	4.92E-03
26	GO:0019005: SCF ubiquitin ligase complex	5.61E-03
27	GO:0009505: plant-type cell wall	5.94E-03
28	GO:0008180: COP9 signalosome	6.20E-03
29	GO:0045298: tubulin complex	6.20E-03
30	GO:0000312: plastid small ribosomal subunit	1.12E-02
31	GO:0042651: thylakoid membrane	1.52E-02
32	GO:0009532: plastid stroma	1.62E-02
33	GO:0048046: apoplast	1.84E-02
34	GO:0016020: membrane	2.18E-02
35	GO:0031225: anchored component of membrane	2.60E-02
36	GO:0005778: peroxisomal membrane	3.21E-02
37	GO:0010319: stromule	3.21E-02
38	GO:0005887: integral component of plasma membrane	3.34E-02
39	GO:0030529: intracellular ribonucleoprotein complex	3.48E-02
40	GO:0005840: ribosome	4.07E-02
41	GO:0009707: chloroplast outer membrane	4.21E-02
42	GO:0000151: ubiquitin ligase complex	4.21E-02