co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G18390

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0002764: immune response-regulating signaling pathway	0.00E+00
2	GO:0032497: detection of lipopolysaccharide	0.00E+00
3	GO:0048867: stem cell fate determination	0.00E+00
4	GO:0042344: indole glucosinolate catabolic process	9.92E-07
5	GO:0052544: defense response by callose deposition in cell wall	1.05E-06
6	GO:0009626: plant-type hypersensitive response	1.26E-05
7	GO:0006491: N-glycan processing	3.06E-05
8	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	5.97E-05
9	GO:0042742: defense response to bacterium	6.33E-05
10	GO:0098710: guanine import across plasma membrane	6.74E-05
11	GO:0071596: ubiquitin-dependent protein catabolic process via the N-end rule pathway	6.74E-05
12	GO:0007292: female gamete generation	6.74E-05
13	GO:0010941: regulation of cell death	6.74E-05
14	GO:0035344: hypoxanthine transport	6.74E-05
15	GO:0071366: cellular response to indolebutyric acid stimulus	6.74E-05
16	GO:0098721: uracil import across plasma membrane	6.74E-05
17	GO:0098702: adenine import across plasma membrane	6.74E-05
18	GO:0035266: meristem growth	6.74E-05
19	GO:0009682: induced systemic resistance	8.50E-05
20	GO:0071712: ER-associated misfolded protein catabolic process	1.62E-04
21	GO:0050994: regulation of lipid catabolic process	1.62E-04
22	GO:0051788: response to misfolded protein	1.62E-04
23	GO:0009727: detection of ethylene stimulus	1.62E-04
24	GO:0048367: shoot system development	2.19E-04
25	GO:0051260: protein homooligomerization	2.30E-04
26	GO:0031348: negative regulation of defense response	2.53E-04
27	GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway	2.75E-04
28	GO:0060968: regulation of gene silencing	2.75E-04
29	GO:0006013: mannose metabolic process	2.75E-04
30	GO:0006954: inflammatory response	2.75E-04
31	GO:0016045: detection of bacterium	2.75E-04
32	GO:1900140: regulation of seedling development	2.75E-04
33	GO:0010359: regulation of anion channel activity	2.75E-04
34	GO:0006517: protein deglycosylation	2.75E-04
35	GO:0009625: response to insect	2.77E-04
36	GO:0048364: root development	3.19E-04
37	GO:0010182: sugar mediated signaling pathway	3.82E-04
38	GO:0046323: glucose import	3.82E-04
39	GO:1901000: regulation of response to salt stress	3.98E-04
40	GO:0070301: cellular response to hydrogen peroxide	3.98E-04
41	GO:0072334: UDP-galactose transmembrane transport	3.98E-04
42	GO:0015749: monosaccharide transport	3.98E-04
43	GO:0009399: nitrogen fixation	3.98E-04
44	GO:0048544: recognition of pollen	4.10E-04
45	GO:0006542: glutamine biosynthetic process	5.32E-04
46	GO:0071281: cellular response to iron ion	5.33E-04
47	GO:0001666: response to hypoxia	6.71E-04
48	GO:0048015: phosphatidylinositol-mediated signaling	6.73E-04
49	GO:0006090: pyruvate metabolic process	6.73E-04
50	GO:0009617: response to bacterium	6.82E-04
51	GO:0009627: systemic acquired resistance	7.46E-04
52	GO:0006388: tRNA splicing, via endonucleolytic cleavage and ligation	8.23E-04
53	GO:0048232: male gamete generation	8.23E-04
54	GO:0043248: proteasome assembly	8.23E-04
55	GO:0050665: hydrogen peroxide biosynthetic process	8.23E-04
56	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	8.23E-04
57	GO:0015691: cadmium ion transport	8.23E-04
58	GO:0048827: phyllome development	8.23E-04
59	GO:0009817: defense response to fungus, incompatible interaction	8.66E-04
60	GO:0008219: cell death	8.66E-04
61	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	9.79E-04
62	GO:0006694: steroid biosynthetic process	9.79E-04
63	GO:0045087: innate immune response	1.08E-03
64	GO:0010044: response to aluminum ion	1.14E-03
65	GO:0006875: cellular metal ion homeostasis	1.32E-03
66	GO:0009690: cytokinin metabolic process	1.32E-03
67	GO:0010078: maintenance of root meristem identity	1.32E-03
68	GO:2000031: regulation of salicylic acid mediated signaling pathway	1.50E-03
69	GO:0010204: defense response signaling pathway, resistance gene-independent	1.50E-03
70	GO:0009737: response to abscisic acid	1.57E-03
71	GO:0009051: pentose-phosphate shunt, oxidative branch	1.69E-03
72	GO:0010112: regulation of systemic acquired resistance	1.69E-03
73	GO:0006813: potassium ion transport	1.85E-03
74	GO:0009408: response to heat	1.99E-03
75	GO:0007064: mitotic sister chromatid cohesion	2.10E-03
76	GO:0048829: root cap development	2.10E-03
77	GO:0010015: root morphogenesis	2.31E-03
78	GO:0072593: reactive oxygen species metabolic process	2.31E-03
79	GO:0010152: pollen maturation	2.53E-03
80	GO:0010105: negative regulation of ethylene-activated signaling pathway	2.53E-03
81	GO:0071365: cellular response to auxin stimulus	2.53E-03
82	GO:0009873: ethylene-activated signaling pathway	2.75E-03
83	GO:0006108: malate metabolic process	2.76E-03
84	GO:0055046: microgametogenesis	2.76E-03
85	GO:0002237: response to molecule of bacterial origin	2.99E-03
86	GO:0009933: meristem structural organization	2.99E-03
87	GO:0007034: vacuolar transport	2.99E-03
88	GO:0009901: anther dehiscence	3.23E-03
89	GO:0090351: seedling development	3.23E-03
90	GO:0046854: phosphatidylinositol phosphorylation	3.23E-03
91	GO:0006487: protein N-linked glycosylation	3.73E-03
92	GO:0006874: cellular calcium ion homeostasis	3.99E-03
93	GO:0010073: meristem maintenance	3.99E-03
94	GO:0031408: oxylipin biosynthetic process	4.26E-03
95	GO:0035428: hexose transmembrane transport	4.53E-03
96	GO:2000022: regulation of jasmonic acid mediated signaling pathway	4.53E-03
97	GO:0030433: ubiquitin-dependent ERAD pathway	4.53E-03
98	GO:0071456: cellular response to hypoxia	4.53E-03
99	GO:0006468: protein phosphorylation	4.62E-03
100	GO:0001944: vasculature development	4.81E-03
101	GO:0010584: pollen exine formation	5.09E-03
102	GO:0006885: regulation of pH	5.98E-03
103	GO:0006511: ubiquitin-dependent protein catabolic process	6.06E-03
104	GO:0019760: glucosinolate metabolic process	7.90E-03
105	GO:0009723: response to ethylene	8.00E-03
106	GO:0048366: leaf development	8.14E-03
107	GO:0016310: phosphorylation	8.14E-03
108	GO:0051607: defense response to virus	8.59E-03
109	GO:0016579: protein deubiquitination	8.59E-03
110	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	8.87E-03
111	GO:0016126: sterol biosynthetic process	8.93E-03
112	GO:0016192: vesicle-mediated transport	9.02E-03
113	GO:0046777: protein autophosphorylation	9.17E-03
114	GO:0010029: regulation of seed germination	9.29E-03
115	GO:0042128: nitrate assimilation	9.65E-03
116	GO:0010311: lateral root formation	1.11E-02
117	GO:0006499: N-terminal protein myristoylation	1.15E-02
118	GO:0009733: response to auxin	1.17E-02
119	GO:0010119: regulation of stomatal movement	1.19E-02
120	GO:0016042: lipid catabolic process	1.23E-02
121	GO:0009651: response to salt stress	1.31E-02
122	GO:0006897: endocytosis	1.44E-02
123	GO:0051707: response to other organism	1.52E-02
124	GO:0008283: cell proliferation	1.52E-02
125	GO:0009965: leaf morphogenesis	1.65E-02
126	GO:0006855: drug transmembrane transport	1.70E-02
127	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	1.74E-02
128	GO:0046686: response to cadmium ion	1.77E-02
129	GO:0009846: pollen germination	1.79E-02
130	GO:0042538: hyperosmotic salinity response	1.79E-02
131	GO:0006812: cation transport	1.79E-02
132	GO:0018105: peptidyl-serine phosphorylation	2.47E-02
133	GO:0006952: defense response	2.76E-02
134	GO:0009790: embryo development	3.17E-02
135	GO:0016036: cellular response to phosphate starvation	3.39E-02
136	GO:0010150: leaf senescence	3.57E-02
137	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	3.86E-02
138	GO:0009739: response to gibberellin	3.86E-02
139	GO:0006470: protein dephosphorylation	3.92E-02
140	GO:0010468: regulation of gene expression	4.04E-02

Rank	GO Term	Adjusted P value
1	GO:0004572: mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase activity	0.00E+00
2	GO:0005358: high-affinity hydrogen:glucose symporter activity	0.00E+00
3	GO:0009679: hexose:proton symporter activity	6.74E-05
4	GO:0016303: 1-phosphatidylinositol-3-kinase activity	6.74E-05
5	GO:0015208: guanine transmembrane transporter activity	6.74E-05
6	GO:0004112: cyclic-nucleotide phosphodiesterase activity	6.74E-05
7	GO:0015294: solute:cation symporter activity	6.74E-05
8	GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity	6.74E-05
9	GO:0015207: adenine transmembrane transporter activity	6.74E-05
10	GO:0005524: ATP binding	9.54E-05
11	GO:0038199: ethylene receptor activity	1.62E-04
12	GO:0047012: sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity	1.62E-04
13	GO:0044390: ubiquitin-like protein conjugating enzyme binding	1.62E-04
14	GO:0019829: cation-transporting ATPase activity	2.75E-04
15	GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity	2.75E-04
16	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	2.75E-04
17	GO:0004473: malate dehydrogenase (decarboxylating) (NADP+) activity	2.75E-04
18	GO:0015086: cadmium ion transmembrane transporter activity	3.98E-04
19	GO:0051740: ethylene binding	3.98E-04
20	GO:0015144: carbohydrate transmembrane transporter activity	4.57E-04
21	GO:0005351: sugar:proton symporter activity	5.32E-04
22	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	5.32E-04
23	GO:0004471: malate dehydrogenase (decarboxylating) (NAD+) activity	5.32E-04
24	GO:0102490: 8-oxo-dGTP phosphohydrolase activity	5.32E-04
25	GO:0015210: uracil transmembrane transporter activity	5.32E-04
26	GO:0019199: transmembrane receptor protein kinase activity	5.32E-04
27	GO:0004470: malic enzyme activity	5.32E-04
28	GO:0016652: oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor	5.32E-04
29	GO:1904264: ubiquitin protein ligase activity involved in ERAD pathway	5.32E-04
30	GO:0005459: UDP-galactose transmembrane transporter activity	6.73E-04
31	GO:0015145: monosaccharide transmembrane transporter activity	6.73E-04
32	GO:0008948: oxaloacetate decarboxylase activity	6.73E-04
33	GO:0004356: glutamate-ammonia ligase activity	6.73E-04
34	GO:0019137: thioglucosidase activity	8.23E-04
35	GO:0036402: proteasome-activating ATPase activity	8.23E-04
36	GO:0016301: kinase activity	8.55E-04
37	GO:0004559: alpha-mannosidase activity	9.79E-04
38	GO:0004620: phospholipase activity	1.14E-03
39	GO:0004630: phospholipase D activity	1.50E-03
40	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	1.50E-03
41	GO:0071949: FAD binding	1.69E-03
42	GO:0004673: protein histidine kinase activity	2.10E-03
43	GO:0047372: acylglycerol lipase activity	2.31E-03
44	GO:0000976: transcription regulatory region sequence-specific DNA binding	2.53E-03
45	GO:0005388: calcium-transporting ATPase activity	2.76E-03
46	GO:0000155: phosphorelay sensor kinase activity	2.76E-03
47	GO:0017025: TBP-class protein binding	3.23E-03
48	GO:0043424: protein histidine kinase binding	3.99E-03
49	GO:0036459: thiol-dependent ubiquitinyl hydrolase activity	4.26E-03
50	GO:0005451: monovalent cation:proton antiporter activity	5.68E-03
51	GO:0005249: voltage-gated potassium channel activity	5.68E-03
52	GO:0030246: carbohydrate binding	5.99E-03
53	GO:0015299: solute:proton antiporter activity	6.28E-03
54	GO:0010181: FMN binding	6.28E-03
55	GO:0005355: glucose transmembrane transporter activity	6.28E-03
56	GO:0004843: thiol-dependent ubiquitin-specific protease activity	6.91E-03
57	GO:0000156: phosphorelay response regulator activity	7.57E-03
58	GO:0015385: sodium:proton antiporter activity	7.57E-03
59	GO:0009931: calcium-dependent protein serine/threonine kinase activity	9.65E-03
60	GO:0102483: scopolin beta-glucosidase activity	1.00E-02
61	GO:0004683: calmodulin-dependent protein kinase activity	1.00E-02
62	GO:0005096: GTPase activator activity	1.11E-02
63	GO:0008422: beta-glucosidase activity	1.35E-02
64	GO:0035091: phosphatidylinositol binding	1.61E-02
65	GO:0051287: NAD binding	1.74E-02
66	GO:0016298: lipase activity	1.93E-02
67	GO:0016887: ATPase activity	1.97E-02
68	GO:0031625: ubiquitin protein ligase binding	2.02E-02
69	GO:0045735: nutrient reservoir activity	2.12E-02
70	GO:0022857: transmembrane transporter activity	2.31E-02
71	GO:0004674: protein serine/threonine kinase activity	2.32E-02
72	GO:0005516: calmodulin binding	3.39E-02
73	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	4.23E-02
74	GO:0042802: identical protein binding	4.23E-02
75	GO:0005515: protein binding	4.46E-02
76	GO:0046982: protein heterodimerization activity	4.80E-02

Rank	GO Term	Adjusted P value
1	GO:0005942: phosphatidylinositol 3-kinase complex	0.00E+00
2	GO:0005886: plasma membrane	2.87E-08
3	GO:0016021: integral component of membrane	1.95E-05
4	GO:0016020: membrane	3.74E-05
5	GO:0008076: voltage-gated potassium channel complex	3.98E-04
6	GO:0036513: Derlin-1 retrotranslocation complex	3.98E-04
7	GO:0005789: endoplasmic reticulum membrane	8.82E-04
8	GO:0030173: integral component of Golgi membrane	9.79E-04
9	GO:0031597: cytosolic proteasome complex	9.79E-04
10	GO:0000815: ESCRT III complex	9.79E-04
11	GO:0005783: endoplasmic reticulum	1.10E-03
12	GO:0031595: nuclear proteasome complex	1.14E-03
13	GO:0008540: proteasome regulatory particle, base subcomplex	1.89E-03
14	GO:0048471: perinuclear region of cytoplasm	2.31E-03
15	GO:0030659: cytoplasmic vesicle membrane	2.99E-03
16	GO:0030176: integral component of endoplasmic reticulum membrane	3.23E-03
17	GO:0009506: plasmodesma	4.44E-03
18	GO:0031410: cytoplasmic vesicle	4.53E-03
19	GO:0000151: ubiquitin ligase complex	1.08E-02
20	GO:0000786: nucleosome	1.23E-02
21	GO:0005774: vacuolar membrane	1.37E-02
22	GO:0000502: proteasome complex	1.88E-02
23	GO:0012505: endomembrane system	2.37E-02
24	GO:0005777: peroxisome	2.59E-02
25	GO:0005623: cell	2.89E-02
26	GO:0005768: endosome	4.10E-02