Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G18360

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0090627: plant epidermal cell differentiation0.00E+00
2GO:0042425: choline biosynthetic process0.00E+00
3GO:1905421: regulation of plant organ morphogenesis0.00E+00
4GO:0030155: regulation of cell adhesion0.00E+00
5GO:0033231: carbohydrate export0.00E+00
6GO:1905255: regulation of RNA binding transcription factor activity0.00E+00
7GO:0018023: peptidyl-lysine trimethylation0.00E+00
8GO:0035304: regulation of protein dephosphorylation5.49E-07
9GO:0019684: photosynthesis, light reaction2.82E-06
10GO:0010207: photosystem II assembly5.70E-06
11GO:0042549: photosystem II stabilization2.35E-05
12GO:2000070: regulation of response to water deprivation5.89E-05
13GO:0010206: photosystem II repair9.24E-05
14GO:0046467: membrane lipid biosynthetic process1.02E-04
15GO:0010480: microsporocyte differentiation1.02E-04
16GO:1902458: positive regulation of stomatal opening1.02E-04
17GO:0010028: xanthophyll cycle1.02E-04
18GO:0034337: RNA folding1.02E-04
19GO:0000305: response to oxygen radical1.02E-04
20GO:1902334: fructose export from vacuole to cytoplasm1.02E-04
21GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process1.02E-04
22GO:0015755: fructose transport1.02E-04
23GO:0019646: aerobic electron transport chain1.02E-04
24GO:0005980: glycogen catabolic process1.02E-04
25GO:0006824: cobalt ion transport1.02E-04
26GO:0010205: photoinhibition1.12E-04
27GO:0018026: peptidyl-lysine monomethylation2.40E-04
28GO:0016122: xanthophyll metabolic process2.40E-04
29GO:1903426: regulation of reactive oxygen species biosynthetic process2.40E-04
30GO:0034755: iron ion transmembrane transport2.40E-04
31GO:0048281: inflorescence morphogenesis3.99E-04
32GO:0015979: photosynthesis4.82E-04
33GO:0010306: rhamnogalacturonan II biosynthetic process5.73E-04
34GO:0051639: actin filament network formation5.73E-04
35GO:0010148: transpiration5.73E-04
36GO:0042938: dipeptide transport7.62E-04
37GO:0009755: hormone-mediated signaling pathway7.62E-04
38GO:0051764: actin crosslink formation7.62E-04
39GO:0015994: chlorophyll metabolic process7.62E-04
40GO:0006749: glutathione metabolic process7.62E-04
41GO:0045038: protein import into chloroplast thylakoid membrane9.62E-04
42GO:0010438: cellular response to sulfur starvation9.62E-04
43GO:0006656: phosphatidylcholine biosynthetic process9.62E-04
44GO:0009913: epidermal cell differentiation1.17E-03
45GO:0006655: phosphatidylglycerol biosynthetic process1.17E-03
46GO:0010190: cytochrome b6f complex assembly1.17E-03
47GO:0042372: phylloquinone biosynthetic process1.40E-03
48GO:0009942: longitudinal axis specification1.40E-03
49GO:1901259: chloroplast rRNA processing1.40E-03
50GO:0031930: mitochondria-nucleus signaling pathway1.40E-03
51GO:0070370: cellular heat acclimation1.65E-03
52GO:0010103: stomatal complex morphogenesis1.65E-03
53GO:0048528: post-embryonic root development1.65E-03
54GO:0048437: floral organ development1.65E-03
55GO:0010439: regulation of glucosinolate biosynthetic process1.90E-03
56GO:0030091: protein repair1.90E-03
57GO:0005978: glycogen biosynthetic process1.90E-03
58GO:0009787: regulation of abscisic acid-activated signaling pathway1.90E-03
59GO:0009819: drought recovery1.90E-03
60GO:0034599: cellular response to oxidative stress1.94E-03
61GO:0001558: regulation of cell growth2.17E-03
62GO:0007389: pattern specification process2.17E-03
63GO:0071482: cellular response to light stimulus2.17E-03
64GO:0006995: cellular response to nitrogen starvation3.05E-03
65GO:1903507: negative regulation of nucleic acid-templated transcription3.36E-03
66GO:0009750: response to fructose3.36E-03
67GO:0048229: gametophyte development3.36E-03
68GO:0046856: phosphatidylinositol dephosphorylation3.36E-03
69GO:0009773: photosynthetic electron transport in photosystem I3.36E-03
70GO:0009682: induced systemic resistance3.36E-03
71GO:0015706: nitrate transport3.69E-03
72GO:0010105: negative regulation of ethylene-activated signaling pathway3.69E-03
73GO:0016024: CDP-diacylglycerol biosynthetic process3.69E-03
74GO:0010075: regulation of meristem growth4.02E-03
75GO:0006094: gluconeogenesis4.02E-03
76GO:0009266: response to temperature stimulus4.37E-03
77GO:0009934: regulation of meristem structural organization4.37E-03
78GO:0010030: positive regulation of seed germination4.72E-03
79GO:0006636: unsaturated fatty acid biosynthetic process5.09E-03
80GO:0009833: plant-type primary cell wall biogenesis5.09E-03
81GO:0006833: water transport5.09E-03
82GO:0009944: polarity specification of adaxial/abaxial axis5.46E-03
83GO:0051017: actin filament bundle assembly5.46E-03
84GO:0051302: regulation of cell division5.85E-03
85GO:0007017: microtubule-based process5.85E-03
86GO:0016998: cell wall macromolecule catabolic process6.24E-03
87GO:0051260: protein homooligomerization6.24E-03
88GO:2000022: regulation of jasmonic acid mediated signaling pathway6.64E-03
89GO:0001944: vasculature development7.06E-03
90GO:0009625: response to insect7.06E-03
91GO:0006633: fatty acid biosynthetic process7.10E-03
92GO:0009306: protein secretion7.48E-03
93GO:0007623: circadian rhythm7.80E-03
94GO:0009789: positive regulation of abscisic acid-activated signaling pathway7.91E-03
95GO:0070417: cellular response to cold7.91E-03
96GO:0034220: ion transmembrane transport8.35E-03
97GO:0048653: anther development8.35E-03
98GO:0042631: cellular response to water deprivation8.35E-03
99GO:0009611: response to wounding8.61E-03
100GO:0048868: pollen tube development8.80E-03
101GO:0009646: response to absence of light9.26E-03
102GO:0048825: cotyledon development9.73E-03
103GO:0019252: starch biosynthetic process9.73E-03
104GO:0010183: pollen tube guidance9.73E-03
105GO:0000302: response to reactive oxygen species1.02E-02
106GO:0010193: response to ozone1.02E-02
107GO:0010583: response to cyclopentenone1.07E-02
108GO:0010252: auxin homeostasis1.17E-02
109GO:0009860: pollen tube growth1.30E-02
110GO:0010411: xyloglucan metabolic process1.48E-02
111GO:0015995: chlorophyll biosynthetic process1.48E-02
112GO:0016311: dephosphorylation1.54E-02
113GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.55E-02
114GO:0030244: cellulose biosynthetic process1.60E-02
115GO:0000160: phosphorelay signal transduction system1.65E-02
116GO:0007568: aging1.77E-02
117GO:0009631: cold acclimation1.77E-02
118GO:0009867: jasmonic acid mediated signaling pathway1.89E-02
119GO:0042742: defense response to bacterium2.05E-02
120GO:0006631: fatty acid metabolic process2.13E-02
121GO:0016042: lipid catabolic process2.16E-02
122GO:0009926: auxin polar transport2.26E-02
123GO:0042546: cell wall biogenesis2.33E-02
124GO:0009644: response to high light intensity2.39E-02
125GO:0009965: leaf morphogenesis2.46E-02
126GO:0031347: regulation of defense response2.59E-02
127GO:0009664: plant-type cell wall organization2.66E-02
128GO:0009736: cytokinin-activated signaling pathway2.80E-02
129GO:0006364: rRNA processing2.80E-02
130GO:0009585: red, far-red light phototransduction2.80E-02
131GO:0010224: response to UV-B2.86E-02
132GO:0006857: oligopeptide transport2.94E-02
133GO:0006096: glycolytic process3.15E-02
134GO:0009624: response to nematode3.59E-02
135GO:0009735: response to cytokinin3.60E-02
136GO:0055114: oxidation-reduction process3.80E-02
137GO:0006468: protein phosphorylation3.85E-02
138GO:0009845: seed germination4.46E-02
139GO:0042744: hydrogen peroxide catabolic process4.62E-02
140GO:0055085: transmembrane transport4.97E-02
RankGO TermAdjusted P value
1GO:0015284: fructose uniporter activity0.00E+00
2GO:0090711: FMN hydrolase activity0.00E+00
3GO:0046422: violaxanthin de-epoxidase activity0.00E+00
4GO:0010242: oxygen evolving activity0.00E+00
5GO:0008266: poly(U) RNA binding5.70E-06
6GO:0004645: phosphorylase activity1.02E-04
7GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity1.02E-04
8GO:0008184: glycogen phosphorylase activity1.02E-04
9GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity1.02E-04
10GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity1.02E-04
11GO:0005353: fructose transmembrane transporter activity2.40E-04
12GO:0000234: phosphoethanolamine N-methyltransferase activity2.40E-04
13GO:0004362: glutathione-disulfide reductase activity2.40E-04
14GO:0016868: intramolecular transferase activity, phosphotransferases2.40E-04
15GO:0009977: proton motive force dependent protein transmembrane transporter activity2.40E-04
16GO:0004312: fatty acid synthase activity2.40E-04
17GO:0003955: NAD(P)H dehydrogenase (quinone) activity3.99E-04
18GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity3.99E-04
19GO:0004445: inositol-polyphosphate 5-phosphatase activity5.73E-04
20GO:0016851: magnesium chelatase activity5.73E-04
21GO:0008878: glucose-1-phosphate adenylyltransferase activity7.62E-04
22GO:0042277: peptide binding7.62E-04
23GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity7.62E-04
24GO:0016279: protein-lysine N-methyltransferase activity7.62E-04
25GO:0042936: dipeptide transporter activity7.62E-04
26GO:0019199: transmembrane receptor protein kinase activity7.62E-04
27GO:0045300: acyl-[acyl-carrier-protein] desaturase activity9.62E-04
28GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity1.17E-03
29GO:0004332: fructose-bisphosphate aldolase activity1.17E-03
30GO:0004130: cytochrome-c peroxidase activity1.17E-03
31GO:0042578: phosphoric ester hydrolase activity1.17E-03
32GO:0033743: peptide-methionine (R)-S-oxide reductase activity1.40E-03
33GO:0009672: auxin:proton symporter activity2.74E-03
34GO:0005381: iron ion transmembrane transporter activity2.74E-03
35GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity3.69E-03
36GO:0031072: heat shock protein binding4.02E-03
37GO:0010329: auxin efflux transmembrane transporter activity4.02E-03
38GO:0051119: sugar transmembrane transporter activity4.72E-03
39GO:0003954: NADH dehydrogenase activity5.46E-03
40GO:0005528: FK506 binding5.46E-03
41GO:0003714: transcription corepressor activity5.46E-03
42GO:0005215: transporter activity5.72E-03
43GO:0008289: lipid binding6.15E-03
44GO:0033612: receptor serine/threonine kinase binding6.24E-03
45GO:0016760: cellulose synthase (UDP-forming) activity7.06E-03
46GO:0005515: protein binding7.21E-03
47GO:0003756: protein disulfide isomerase activity7.48E-03
48GO:0019901: protein kinase binding9.73E-03
49GO:0016762: xyloglucan:xyloglucosyl transferase activity1.02E-02
50GO:0000156: phosphorelay response regulator activity1.12E-02
51GO:0051015: actin filament binding1.12E-02
52GO:0016759: cellulose synthase activity1.17E-02
53GO:0005200: structural constituent of cytoskeleton1.22E-02
54GO:0016788: hydrolase activity, acting on ester bonds1.23E-02
55GO:0015250: water channel activity1.32E-02
56GO:0016168: chlorophyll binding1.38E-02
57GO:0016798: hydrolase activity, acting on glycosyl bonds1.48E-02
58GO:0016787: hydrolase activity1.55E-02
59GO:0052689: carboxylic ester hydrolase activity1.66E-02
60GO:0005509: calcium ion binding1.85E-02
61GO:0003993: acid phosphatase activity1.95E-02
62GO:0050661: NADP binding2.07E-02
63GO:0043621: protein self-association2.39E-02
64GO:0005198: structural molecule activity2.46E-02
65GO:0003755: peptidyl-prolyl cis-trans isomerase activity2.52E-02
66GO:0016298: lipase activity2.86E-02
67GO:0003779: actin binding3.52E-02
68GO:0051082: unfolded protein binding3.59E-02
69GO:0016746: transferase activity, transferring acyl groups3.67E-02
70GO:0008026: ATP-dependent helicase activity3.75E-02
71GO:0019843: rRNA binding4.22E-02
72GO:0030170: pyridoxal phosphate binding4.54E-02
RankGO TermAdjusted P value
1GO:0009534: chloroplast thylakoid1.64E-22
2GO:0009507: chloroplast3.78E-20
3GO:0009535: chloroplast thylakoid membrane1.35E-18
4GO:0009543: chloroplast thylakoid lumen4.69E-14
5GO:0009579: thylakoid4.57E-12
6GO:0031977: thylakoid lumen1.26E-10
7GO:0030095: chloroplast photosystem II4.65E-10
8GO:0009570: chloroplast stroma5.07E-10
9GO:0010287: plastoglobule3.72E-09
10GO:0009654: photosystem II oxygen evolving complex1.21E-05
11GO:0009941: chloroplast envelope2.41E-05
12GO:0019898: extrinsic component of membrane4.07E-05
13GO:0031304: intrinsic component of mitochondrial inner membrane2.40E-04
14GO:0030093: chloroplast photosystem I2.40E-04
15GO:0033281: TAT protein transport complex3.99E-04
16GO:0010007: magnesium chelatase complex3.99E-04
17GO:0042646: plastid nucleoid5.73E-04
18GO:0032432: actin filament bundle5.73E-04
19GO:0009522: photosystem I7.02E-04
20GO:0055035: plastid thylakoid membrane9.62E-04
21GO:0016363: nuclear matrix1.40E-03
22GO:0009538: photosystem I reaction center1.90E-03
23GO:0045298: tubulin complex2.45E-03
24GO:0005884: actin filament3.36E-03
25GO:0032040: small-subunit processome3.69E-03
26GO:0016602: CCAAT-binding factor complex4.02E-03
27GO:0016021: integral component of membrane8.03E-03
28GO:0009536: plastid2.65E-02
29GO:0009706: chloroplast inner membrane3.59E-02
30GO:0005618: cell wall3.85E-02
31GO:0005623: cell4.30E-02
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Gene type



Gene DE type