co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G17200

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process	0.00E+00
2	GO:0006429: leucyl-tRNA aminoacylation	0.00E+00
3	GO:0045176: apical protein localization	0.00E+00
4	GO:0061635: regulation of protein complex stability	0.00E+00
5	GO:0035970: peptidyl-threonine dephosphorylation	0.00E+00
6	GO:1904966: positive regulation of vitamin E biosynthetic process	0.00E+00
7	GO:1904964: positive regulation of phytol biosynthetic process	0.00E+00
8	GO:0009773: photosynthetic electron transport in photosystem I	1.50E-12
9	GO:0015979: photosynthesis	3.96E-10
10	GO:0010027: thylakoid membrane organization	1.99E-07
11	GO:0009735: response to cytokinin	2.44E-06
12	GO:1902326: positive regulation of chlorophyll biosynthetic process	5.59E-06
13	GO:0018298: protein-chromophore linkage	1.05E-05
14	GO:0016120: carotene biosynthetic process	1.21E-04
15	GO:0010196: nonphotochemical quenching	3.06E-04
16	GO:0006106: fumarate metabolic process	3.52E-04
17	GO:0034337: RNA folding	3.52E-04
18	GO:0071596: ubiquitin-dependent protein catabolic process via the N-end rule pathway	3.52E-04
19	GO:0071588: hydrogen peroxide mediated signaling pathway	3.52E-04
20	GO:0070509: calcium ion import	3.52E-04
21	GO:0007263: nitric oxide mediated signal transduction	3.52E-04
22	GO:0043953: protein transport by the Tat complex	3.52E-04
23	GO:0071277: cellular response to calcium ion	3.52E-04
24	GO:0000481: maturation of 5S rRNA	3.52E-04
25	GO:0080051: cutin transport	3.52E-04
26	GO:0065002: intracellular protein transmembrane transport	3.52E-04
27	GO:0042335: cuticle development	3.63E-04
28	GO:0008610: lipid biosynthetic process	3.84E-04
29	GO:0032544: plastid translation	4.70E-04
30	GO:0009416: response to light stimulus	5.75E-04
31	GO:0010205: photoinhibition	6.66E-04
32	GO:0009638: phototropism	6.66E-04
33	GO:0030388: fructose 1,6-bisphosphate metabolic process	7.67E-04
34	GO:0043255: regulation of carbohydrate biosynthetic process	7.67E-04
35	GO:0080005: photosystem stoichiometry adjustment	7.67E-04
36	GO:0010115: regulation of abscisic acid biosynthetic process	7.67E-04
37	GO:0015908: fatty acid transport	7.67E-04
38	GO:0034755: iron ion transmembrane transport	7.67E-04
39	GO:0042939: tripeptide transport	7.67E-04
40	GO:0045717: negative regulation of fatty acid biosynthetic process	7.67E-04
41	GO:0000038: very long-chain fatty acid metabolic process	8.95E-04
42	GO:0055085: transmembrane transport	9.75E-04
43	GO:0006094: gluconeogenesis	1.16E-03
44	GO:0016050: vesicle organization	1.24E-03
45	GO:0031022: nuclear migration along microfilament	1.24E-03
46	GO:1902448: positive regulation of shade avoidance	1.24E-03
47	GO:0006000: fructose metabolic process	1.24E-03
48	GO:0006954: inflammatory response	1.24E-03
49	GO:0090391: granum assembly	1.24E-03
50	GO:0006518: peptide metabolic process	1.24E-03
51	GO:0006833: water transport	1.62E-03
52	GO:0010025: wax biosynthetic process	1.62E-03
53	GO:0046836: glycolipid transport	1.79E-03
54	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	1.79E-03
55	GO:0009152: purine ribonucleotide biosynthetic process	1.79E-03
56	GO:0046653: tetrahydrofolate metabolic process	1.79E-03
57	GO:0080170: hydrogen peroxide transmembrane transport	1.79E-03
58	GO:1901332: negative regulation of lateral root development	1.79E-03
59	GO:0009768: photosynthesis, light harvesting in photosystem I	1.98E-03
60	GO:0006810: transport	2.15E-03
61	GO:0010222: stem vascular tissue pattern formation	2.40E-03
62	GO:0010109: regulation of photosynthesis	2.40E-03
63	GO:0009765: photosynthesis, light harvesting	2.40E-03
64	GO:0045727: positive regulation of translation	2.40E-03
65	GO:0015994: chlorophyll metabolic process	2.40E-03
66	GO:0042938: dipeptide transport	2.40E-03
67	GO:0010021: amylopectin biosynthetic process	2.40E-03
68	GO:0009306: protein secretion	2.82E-03
69	GO:0006461: protein complex assembly	3.07E-03
70	GO:0032543: mitochondrial translation	3.07E-03
71	GO:0006564: L-serine biosynthetic process	3.07E-03
72	GO:0009904: chloroplast accumulation movement	3.07E-03
73	GO:0034220: ion transmembrane transport	3.31E-03
74	GO:0006561: proline biosynthetic process	3.79E-03
75	GO:0010304: PSII associated light-harvesting complex II catabolic process	3.79E-03
76	GO:0048827: phyllome development	3.79E-03
77	GO:0042549: photosystem II stabilization	3.79E-03
78	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	3.79E-03
79	GO:0016554: cytidine to uridine editing	3.79E-03
80	GO:0009913: epidermal cell differentiation	3.79E-03
81	GO:0010190: cytochrome b6f complex assembly	3.79E-03
82	GO:0006086: acetyl-CoA biosynthetic process from pyruvate	3.79E-03
83	GO:0010337: regulation of salicylic acid metabolic process	3.79E-03
84	GO:0010019: chloroplast-nucleus signaling pathway	4.57E-03
85	GO:0009903: chloroplast avoidance movement	4.57E-03
86	GO:0030488: tRNA methylation	4.57E-03
87	GO:0009395: phospholipid catabolic process	5.40E-03
88	GO:1900057: positive regulation of leaf senescence	5.40E-03
89	GO:0009645: response to low light intensity stimulus	5.40E-03
90	GO:0010444: guard mother cell differentiation	5.40E-03
91	GO:0010492: maintenance of shoot apical meristem identity	6.27E-03
92	GO:0009642: response to light intensity	6.27E-03
93	GO:0006605: protein targeting	6.27E-03
94	GO:0009704: de-etiolation	6.27E-03
95	GO:0032508: DNA duplex unwinding	6.27E-03
96	GO:0006002: fructose 6-phosphate metabolic process	7.19E-03
97	GO:0071482: cellular response to light stimulus	7.19E-03
98	GO:0009657: plastid organization	7.19E-03
99	GO:0015995: chlorophyll biosynthetic process	7.51E-03
100	GO:0006098: pentose-phosphate shunt	8.16E-03
101	GO:0010206: photosystem II repair	8.16E-03
102	GO:0048507: meristem development	8.16E-03
103	GO:0090333: regulation of stomatal closure	8.16E-03
104	GO:0030244: cellulose biosynthetic process	8.33E-03
105	GO:0006869: lipid transport	8.56E-03
106	GO:0006633: fatty acid biosynthetic process	8.91E-03
107	GO:1900865: chloroplast RNA modification	9.17E-03
108	GO:0009631: cold acclimation	9.64E-03
109	GO:0006032: chitin catabolic process	1.02E-02
110	GO:0009688: abscisic acid biosynthetic process	1.02E-02
111	GO:0006879: cellular iron ion homeostasis	1.13E-02
112	GO:0009750: response to fructose	1.13E-02
113	GO:0008152: metabolic process	1.19E-02
114	GO:0010229: inflorescence development	1.37E-02
115	GO:0050826: response to freezing	1.37E-02
116	GO:0009718: anthocyanin-containing compound biosynthetic process	1.37E-02
117	GO:0009725: response to hormone	1.37E-02
118	GO:0005986: sucrose biosynthetic process	1.37E-02
119	GO:0010588: cotyledon vascular tissue pattern formation	1.37E-02
120	GO:0010102: lateral root morphogenesis	1.37E-02
121	GO:0009785: blue light signaling pathway	1.37E-02
122	GO:0010628: positive regulation of gene expression	1.37E-02
123	GO:0006807: nitrogen compound metabolic process	1.37E-02
124	GO:0006108: malate metabolic process	1.37E-02
125	GO:0009644: response to high light intensity	1.48E-02
126	GO:0009409: response to cold	1.49E-02
127	GO:0010540: basipetal auxin transport	1.49E-02
128	GO:0010143: cutin biosynthetic process	1.49E-02
129	GO:0010207: photosystem II assembly	1.49E-02
130	GO:0019253: reductive pentose-phosphate cycle	1.49E-02
131	GO:0006855: drug transmembrane transport	1.60E-02
132	GO:0010053: root epidermal cell differentiation	1.61E-02
133	GO:0009825: multidimensional cell growth	1.61E-02
134	GO:0010167: response to nitrate	1.61E-02
135	GO:0005985: sucrose metabolic process	1.61E-02
136	GO:0071732: cellular response to nitric oxide	1.61E-02
137	GO:0009833: plant-type primary cell wall biogenesis	1.74E-02
138	GO:0006636: unsaturated fatty acid biosynthetic process	1.74E-02
139	GO:0009809: lignin biosynthetic process	1.85E-02
140	GO:0006364: rRNA processing	1.85E-02
141	GO:0008299: isoprenoid biosynthetic process	2.01E-02
142	GO:0006418: tRNA aminoacylation for protein translation	2.01E-02
143	GO:0016998: cell wall macromolecule catabolic process	2.15E-02
144	GO:0006096: glycolytic process	2.18E-02
145	GO:0016226: iron-sulfur cluster assembly	2.29E-02
146	GO:0035428: hexose transmembrane transport	2.29E-02
147	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.40E-02
148	GO:0071369: cellular response to ethylene stimulus	2.44E-02
149	GO:0016117: carotenoid biosynthetic process	2.74E-02
150	GO:0042391: regulation of membrane potential	2.90E-02
151	GO:0010182: sugar mediated signaling pathway	3.06E-02
152	GO:0046323: glucose import	3.06E-02
153	GO:0007018: microtubule-based movement	3.22E-02
154	GO:0048825: cotyledon development	3.39E-02
155	GO:0019252: starch biosynthetic process	3.39E-02
156	GO:0008654: phospholipid biosynthetic process	3.39E-02
157	GO:0071554: cell wall organization or biogenesis	3.55E-02
158	GO:0000302: response to reactive oxygen species	3.55E-02
159	GO:0016032: viral process	3.72E-02
160	GO:0042744: hydrogen peroxide catabolic process	3.75E-02
161	GO:0071281: cellular response to iron ion	3.90E-02
162	GO:0009567: double fertilization forming a zygote and endosperm	4.07E-02
163	GO:0007623: circadian rhythm	4.53E-02
164	GO:0009911: positive regulation of flower development	4.62E-02
165	GO:0001666: response to hypoxia	4.62E-02
166	GO:0042128: nitrate assimilation	4.99E-02

Rank	GO Term	Adjusted P value
1	GO:0102193: protein-ribulosamine 3-kinase activity	0.00E+00
2	GO:0045436: lycopene beta cyclase activity	0.00E+00
3	GO:0005222: intracellular cAMP activated cation channel activity	0.00E+00
4	GO:0010301: xanthoxin dehydrogenase activity	0.00E+00
5	GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity	0.00E+00
6	GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors	0.00E+00
7	GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity	0.00E+00
8	GO:0090471: 9,15,9'-tri-cis-zeta-carotene isomerase activity	0.00E+00
9	GO:0004823: leucine-tRNA ligase activity	0.00E+00
10	GO:0016168: chlorophyll binding	6.10E-06
11	GO:0043495: protein anchor	7.72E-05
12	GO:0022891: substrate-specific transmembrane transporter activity	2.62E-04
13	GO:0019899: enzyme binding	3.06E-04
14	GO:0005221: intracellular cyclic nucleotide activated cation channel activity	3.52E-04
15	GO:0004333: fumarate hydratase activity	3.52E-04
16	GO:0050139: nicotinate-N-glucosyltransferase activity	3.52E-04
17	GO:0070006: metalloaminopeptidase activity	3.52E-04
18	GO:0045485: omega-6 fatty acid desaturase activity	3.52E-04
19	GO:0015245: fatty acid transporter activity	3.52E-04
20	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	6.47E-04
21	GO:0047746: chlorophyllase activity	7.67E-04
22	GO:0009977: proton motive force dependent protein transmembrane transporter activity	7.67E-04
23	GO:0004617: phosphoglycerate dehydrogenase activity	7.67E-04
24	GO:0033201: alpha-1,4-glucan synthase activity	7.67E-04
25	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	7.67E-04
26	GO:0008967: phosphoglycolate phosphatase activity	7.67E-04
27	GO:0042937: tripeptide transporter activity	7.67E-04
28	GO:0004565: beta-galactosidase activity	1.16E-03
29	GO:0004022: alcohol dehydrogenase (NAD) activity	1.16E-03
30	GO:0016742: hydroxymethyl-, formyl- and related transferase activity	1.24E-03
31	GO:0070402: NADPH binding	1.24E-03
32	GO:0008864: formyltetrahydrofolate deformylase activity	1.24E-03
33	GO:0004373: glycogen (starch) synthase activity	1.24E-03
34	GO:0002161: aminoacyl-tRNA editing activity	1.24E-03
35	GO:0004222: metalloendopeptidase activity	1.32E-03
36	GO:0031409: pigment binding	1.62E-03
37	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	1.62E-03
38	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	1.62E-03
39	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	1.62E-03
40	GO:0001872: (1->3)-beta-D-glucan binding	1.79E-03
41	GO:0017089: glycolipid transporter activity	1.79E-03
42	GO:0016851: magnesium chelatase activity	1.79E-03
43	GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity	1.79E-03
44	GO:0051536: iron-sulfur cluster binding	1.80E-03
45	GO:0005528: FK506 binding	1.80E-03
46	GO:0016787: hydrolase activity	1.92E-03
47	GO:0004176: ATP-dependent peptidase activity	2.18E-03
48	GO:0042936: dipeptide transporter activity	2.40E-03
49	GO:0051861: glycolipid binding	2.40E-03
50	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	2.40E-03
51	GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity	2.40E-03
52	GO:0004045: aminoacyl-tRNA hydrolase activity	2.40E-03
53	GO:0080032: methyl jasmonate esterase activity	2.40E-03
54	GO:0009011: starch synthase activity	2.40E-03
55	GO:0042802: identical protein binding	3.02E-03
56	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	3.79E-03
57	GO:0004332: fructose-bisphosphate aldolase activity	3.79E-03
58	GO:0004130: cytochrome-c peroxidase activity	3.79E-03
59	GO:0042578: phosphoric ester hydrolase activity	3.79E-03
60	GO:0016688: L-ascorbate peroxidase activity	3.79E-03
61	GO:0016788: hydrolase activity, acting on ester bonds	4.20E-03
62	GO:0005242: inward rectifier potassium channel activity	4.57E-03
63	GO:0005261: cation channel activity	4.57E-03
64	GO:0004620: phospholipase activity	5.40E-03
65	GO:0008237: metallopeptidase activity	5.67E-03
66	GO:0016597: amino acid binding	6.02E-03
67	GO:0052747: sinapyl alcohol dehydrogenase activity	6.27E-03
68	GO:0043022: ribosome binding	6.27E-03
69	GO:0015250: water channel activity	6.37E-03
70	GO:0030247: polysaccharide binding	7.51E-03
71	GO:0004871: signal transducer activity	7.99E-03
72	GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors	8.16E-03
73	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	8.33E-03
74	GO:0005381: iron ion transmembrane transporter activity	9.17E-03
75	GO:0004568: chitinase activity	1.02E-02
76	GO:0004177: aminopeptidase activity	1.13E-02
77	GO:0015386: potassium:proton antiporter activity	1.13E-02
78	GO:0045551: cinnamyl-alcohol dehydrogenase activity	1.25E-02
79	GO:0005262: calcium channel activity	1.37E-02
80	GO:0016491: oxidoreductase activity	1.41E-02
81	GO:0008266: poly(U) RNA binding	1.49E-02
82	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.60E-02
83	GO:0030552: cAMP binding	1.61E-02
84	GO:0030553: cGMP binding	1.61E-02
85	GO:0043424: protein histidine kinase binding	2.01E-02
86	GO:0005216: ion channel activity	2.01E-02
87	GO:0015079: potassium ion transmembrane transporter activity	2.01E-02
88	GO:0016760: cellulose synthase (UDP-forming) activity	2.44E-02
89	GO:0016746: transferase activity, transferring acyl groups	2.71E-02
90	GO:0004812: aminoacyl-tRNA ligase activity	2.74E-02
91	GO:0005215: transporter activity	2.88E-02
92	GO:0030551: cyclic nucleotide binding	2.90E-02
93	GO:0016853: isomerase activity	3.22E-02
94	GO:0005355: glucose transmembrane transporter activity	3.22E-02
95	GO:0050662: coenzyme binding	3.22E-02
96	GO:0019843: rRNA binding	3.29E-02
97	GO:0004872: receptor activity	3.39E-02
98	GO:0048038: quinone binding	3.55E-02
99	GO:0004518: nuclease activity	3.72E-02
100	GO:0000156: phosphorelay response regulator activity	3.90E-02
101	GO:0016759: cellulose synthase activity	4.07E-02
102	GO:0016791: phosphatase activity	4.07E-02
103	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	4.23E-02
104	GO:0016413: O-acetyltransferase activity	4.43E-02
105	GO:0004672: protein kinase activity	4.59E-02
106	GO:0003729: mRNA binding	4.69E-02

Rank	GO Term	Adjusted P value
1	GO:0009571: proplastid stroma	0.00E+00
2	GO:0043235: receptor complex	0.00E+00
3	GO:0009575: chromoplast stroma	0.00E+00
4	GO:0009507: chloroplast	4.36E-43
5	GO:0009535: chloroplast thylakoid membrane	6.67E-34
6	GO:0009534: chloroplast thylakoid	1.70E-16
7	GO:0009570: chloroplast stroma	1.91E-16
8	GO:0009941: chloroplast envelope	1.28E-13
9	GO:0009579: thylakoid	1.08E-09
10	GO:0009543: chloroplast thylakoid lumen	1.42E-07
11	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	3.88E-07
12	GO:0016021: integral component of membrane	4.86E-07
13	GO:0031977: thylakoid lumen	1.71E-06
14	GO:0042651: thylakoid membrane	8.21E-06
15	GO:0009523: photosystem II	3.85E-05
16	GO:0031969: chloroplast membrane	4.98E-05
17	GO:0045239: tricarboxylic acid cycle enzyme complex	3.52E-04
18	GO:0031361: integral component of thylakoid membrane	3.52E-04
19	GO:0009782: photosystem I antenna complex	3.52E-04
20	GO:0009515: granal stacked thylakoid	3.52E-04
21	GO:0010287: plastoglobule	1.18E-03
22	GO:0009897: external side of plasma membrane	1.24E-03
23	GO:0010007: magnesium chelatase complex	1.24E-03
24	GO:0033281: TAT protein transport complex	1.24E-03
25	GO:0030076: light-harvesting complex	1.45E-03
26	GO:0009654: photosystem II oxygen evolving complex	1.98E-03
27	GO:0019898: extrinsic component of membrane	4.11E-03
28	GO:0009706: chloroplast inner membrane	5.00E-03
29	GO:0009533: chloroplast stromal thylakoid	5.40E-03
30	GO:0009501: amyloplast	6.27E-03
31	GO:0048046: apoplast	7.40E-03
32	GO:0008180: COP9 signalosome	8.16E-03
33	GO:0032040: small-subunit processome	1.25E-02
34	GO:0009508: plastid chromosome	1.37E-02
35	GO:0046658: anchored component of plasma membrane	1.44E-02
36	GO:0030095: chloroplast photosystem II	1.49E-02
37	GO:0016020: membrane	1.82E-02
38	GO:0005871: kinesin complex	2.74E-02
39	GO:0005770: late endosome	3.06E-02
40	GO:0005886: plasma membrane	3.19E-02
41	GO:0009522: photosystem I	3.22E-02
42	GO:0010319: stromule	4.25E-02
43	GO:0009295: nucleoid	4.25E-02
44	GO:0030529: intracellular ribonucleoprotein complex	4.62E-02