GO Enrichment Analysis of Co-expressed Genes with
AT1G16880
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009249: protein lipoylation | 0.00E+00 |
| 2 | GO:0015822: ornithine transport | 0.00E+00 |
| 3 | GO:0005996: monosaccharide metabolic process | 0.00E+00 |
| 4 | GO:0070272: proton-transporting ATP synthase complex biogenesis | 0.00E+00 |
| 5 | GO:0009106: lipoate metabolic process | 0.00E+00 |
| 6 | GO:0006573: valine metabolic process | 0.00E+00 |
| 7 | GO:0008298: intracellular mRNA localization | 0.00E+00 |
| 8 | GO:0070125: mitochondrial translational elongation | 0.00E+00 |
| 9 | GO:0019253: reductive pentose-phosphate cycle | 8.89E-10 |
| 10 | GO:0018119: peptidyl-cysteine S-nitrosylation | 4.23E-06 |
| 11 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 6.72E-06 |
| 12 | GO:0006006: glucose metabolic process | 6.82E-06 |
| 13 | GO:0019464: glycine decarboxylation via glycine cleavage system | 1.25E-05 |
| 14 | GO:0006546: glycine catabolic process | 1.25E-05 |
| 15 | GO:0006810: transport | 3.50E-05 |
| 16 | GO:0016117: carotenoid biosynthetic process | 3.65E-05 |
| 17 | GO:0042026: protein refolding | 4.39E-05 |
| 18 | GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process | 1.22E-04 |
| 19 | GO:0006438: valyl-tRNA aminoacylation | 1.22E-04 |
| 20 | GO:0010480: microsporocyte differentiation | 1.22E-04 |
| 21 | GO:0006551: leucine metabolic process | 1.22E-04 |
| 22 | GO:0000066: mitochondrial ornithine transport | 1.22E-04 |
| 23 | GO:0048229: gametophyte development | 2.00E-04 |
| 24 | GO:0046686: response to cadmium ion | 2.32E-04 |
| 25 | GO:0009767: photosynthetic electron transport chain | 2.65E-04 |
| 26 | GO:0019388: galactose catabolic process | 2.82E-04 |
| 27 | GO:0080183: response to photooxidative stress | 2.82E-04 |
| 28 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 2.82E-04 |
| 29 | GO:0006000: fructose metabolic process | 4.65E-04 |
| 30 | GO:0006696: ergosterol biosynthetic process | 4.65E-04 |
| 31 | GO:0061077: chaperone-mediated protein folding | 5.06E-04 |
| 32 | GO:0007005: mitochondrion organization | 5.53E-04 |
| 33 | GO:0080092: regulation of pollen tube growth | 5.53E-04 |
| 34 | GO:0006096: glycolytic process | 5.88E-04 |
| 35 | GO:0051085: chaperone mediated protein folding requiring cofactor | 6.66E-04 |
| 36 | GO:0010239: chloroplast mRNA processing | 6.66E-04 |
| 37 | GO:0016556: mRNA modification | 6.66E-04 |
| 38 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 6.66E-04 |
| 39 | GO:0033014: tetrapyrrole biosynthetic process | 6.66E-04 |
| 40 | GO:0010731: protein glutathionylation | 6.66E-04 |
| 41 | GO:0009590: detection of gravity | 6.66E-04 |
| 42 | GO:2001141: regulation of RNA biosynthetic process | 6.66E-04 |
| 43 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 6.66E-04 |
| 44 | GO:0009409: response to cold | 7.33E-04 |
| 45 | GO:0045727: positive regulation of translation | 8.84E-04 |
| 46 | GO:0006542: glutamine biosynthetic process | 8.84E-04 |
| 47 | GO:0019676: ammonia assimilation cycle | 8.84E-04 |
| 48 | GO:0019252: starch biosynthetic process | 9.36E-04 |
| 49 | GO:0010236: plastoquinone biosynthetic process | 1.12E-03 |
| 50 | GO:0009107: lipoate biosynthetic process | 1.12E-03 |
| 51 | GO:1902183: regulation of shoot apical meristem development | 1.12E-03 |
| 52 | GO:0016123: xanthophyll biosynthetic process | 1.12E-03 |
| 53 | GO:0070814: hydrogen sulfide biosynthetic process | 1.37E-03 |
| 54 | GO:0010190: cytochrome b6f complex assembly | 1.37E-03 |
| 55 | GO:0042549: photosystem II stabilization | 1.37E-03 |
| 56 | GO:0009082: branched-chain amino acid biosynthetic process | 1.64E-03 |
| 57 | GO:0006458: 'de novo' protein folding | 1.64E-03 |
| 58 | GO:0017148: negative regulation of translation | 1.64E-03 |
| 59 | GO:0009099: valine biosynthetic process | 1.64E-03 |
| 60 | GO:0048437: floral organ development | 1.92E-03 |
| 61 | GO:0006826: iron ion transport | 1.92E-03 |
| 62 | GO:0006880: intracellular sequestering of iron ion | 1.92E-03 |
| 63 | GO:0048564: photosystem I assembly | 2.22E-03 |
| 64 | GO:0008610: lipid biosynthetic process | 2.22E-03 |
| 65 | GO:0005978: glycogen biosynthetic process | 2.22E-03 |
| 66 | GO:0052543: callose deposition in cell wall | 2.22E-03 |
| 67 | GO:0016559: peroxisome fission | 2.22E-03 |
| 68 | GO:0009416: response to light stimulus | 2.40E-03 |
| 69 | GO:0009658: chloroplast organization | 2.53E-03 |
| 70 | GO:0006002: fructose 6-phosphate metabolic process | 2.54E-03 |
| 71 | GO:0071482: cellular response to light stimulus | 2.54E-03 |
| 72 | GO:0006075: (1->3)-beta-D-glucan biosynthetic process | 2.54E-03 |
| 73 | GO:0048193: Golgi vesicle transport | 2.54E-03 |
| 74 | GO:0009097: isoleucine biosynthetic process | 2.54E-03 |
| 75 | GO:0010100: negative regulation of photomorphogenesis | 2.54E-03 |
| 76 | GO:0006526: arginine biosynthetic process | 2.54E-03 |
| 77 | GO:0032544: plastid translation | 2.54E-03 |
| 78 | GO:0010206: photosystem II repair | 2.87E-03 |
| 79 | GO:2000024: regulation of leaf development | 2.87E-03 |
| 80 | GO:0006783: heme biosynthetic process | 2.87E-03 |
| 81 | GO:0009744: response to sucrose | 2.99E-03 |
| 82 | GO:0006779: porphyrin-containing compound biosynthetic process | 3.21E-03 |
| 83 | GO:0009636: response to toxic substance | 3.36E-03 |
| 84 | GO:0009970: cellular response to sulfate starvation | 3.57E-03 |
| 85 | GO:0000103: sulfate assimilation | 3.57E-03 |
| 86 | GO:0000038: very long-chain fatty acid metabolic process | 3.94E-03 |
| 87 | GO:0009773: photosynthetic electron transport in photosystem I | 3.94E-03 |
| 88 | GO:0019684: photosynthesis, light reaction | 3.94E-03 |
| 89 | GO:0006879: cellular iron ion homeostasis | 3.94E-03 |
| 90 | GO:0006352: DNA-templated transcription, initiation | 3.94E-03 |
| 91 | GO:0000272: polysaccharide catabolic process | 3.94E-03 |
| 92 | GO:0045037: protein import into chloroplast stroma | 4.32E-03 |
| 93 | GO:0005986: sucrose biosynthetic process | 4.71E-03 |
| 94 | GO:0010075: regulation of meristem growth | 4.71E-03 |
| 95 | GO:0006094: gluconeogenesis | 4.71E-03 |
| 96 | GO:0010207: photosystem II assembly | 5.12E-03 |
| 97 | GO:0009934: regulation of meristem structural organization | 5.12E-03 |
| 98 | GO:0007031: peroxisome organization | 5.54E-03 |
| 99 | GO:0010039: response to iron ion | 5.54E-03 |
| 100 | GO:0009944: polarity specification of adaxial/abaxial axis | 6.42E-03 |
| 101 | GO:0006418: tRNA aminoacylation for protein translation | 6.87E-03 |
| 102 | GO:0006730: one-carbon metabolic process | 7.81E-03 |
| 103 | GO:0006468: protein phosphorylation | 8.04E-03 |
| 104 | GO:0010082: regulation of root meristem growth | 8.30E-03 |
| 105 | GO:0048653: anther development | 9.83E-03 |
| 106 | GO:0042631: cellular response to water deprivation | 9.83E-03 |
| 107 | GO:0042335: cuticle development | 9.83E-03 |
| 108 | GO:0008360: regulation of cell shape | 1.04E-02 |
| 109 | GO:0055072: iron ion homeostasis | 1.15E-02 |
| 110 | GO:0000302: response to reactive oxygen species | 1.20E-02 |
| 111 | GO:0055114: oxidation-reduction process | 1.37E-02 |
| 112 | GO:0010286: heat acclimation | 1.44E-02 |
| 113 | GO:0042128: nitrate assimilation | 1.69E-02 |
| 114 | GO:0009627: systemic acquired resistance | 1.69E-02 |
| 115 | GO:0009817: defense response to fungus, incompatible interaction | 1.88E-02 |
| 116 | GO:0008219: cell death | 1.88E-02 |
| 117 | GO:0009407: toxin catabolic process | 2.02E-02 |
| 118 | GO:0007568: aging | 2.09E-02 |
| 119 | GO:0015979: photosynthesis | 2.17E-02 |
| 120 | GO:0009853: photorespiration | 2.23E-02 |
| 121 | GO:0016051: carbohydrate biosynthetic process | 2.23E-02 |
| 122 | GO:0006839: mitochondrial transport | 2.44E-02 |
| 123 | GO:0009793: embryo development ending in seed dormancy | 2.47E-02 |
| 124 | GO:0042742: defense response to bacterium | 2.75E-02 |
| 125 | GO:0042538: hyperosmotic salinity response | 3.14E-02 |
| 126 | GO:0006364: rRNA processing | 3.30E-02 |
| 127 | GO:0009735: response to cytokinin | 4.53E-02 |
| 128 | GO:0005975: carbohydrate metabolic process | 4.59E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009974: zeinoxanthin epsilon hydroxylase activity | 0.00E+00 |
| 2 | GO:0046905: phytoene synthase activity | 0.00E+00 |
| 3 | GO:0008962: phosphatidylglycerophosphatase activity | 0.00E+00 |
| 4 | GO:0050278: sedoheptulose-bisphosphatase activity | 0.00E+00 |
| 5 | GO:0008942: nitrite reductase [NAD(P)H] activity | 0.00E+00 |
| 6 | GO:0004358: glutamate N-acetyltransferase activity | 0.00E+00 |
| 7 | GO:0033819: lipoyl(octanoyl) transferase activity | 0.00E+00 |
| 8 | GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity | 0.00E+00 |
| 9 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 7.51E-07 |
| 10 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 6.65E-06 |
| 11 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 4.39E-05 |
| 12 | GO:0004325: ferrochelatase activity | 1.22E-04 |
| 13 | GO:0051996: squalene synthase activity | 1.22E-04 |
| 14 | GO:0010313: phytochrome binding | 1.22E-04 |
| 15 | GO:0003984: acetolactate synthase activity | 1.22E-04 |
| 16 | GO:0004832: valine-tRNA ligase activity | 1.22E-04 |
| 17 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 2.00E-04 |
| 18 | GO:0044183: protein binding involved in protein folding | 2.00E-04 |
| 19 | GO:0004047: aminomethyltransferase activity | 2.82E-04 |
| 20 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 2.82E-04 |
| 21 | GO:0000064: L-ornithine transmembrane transporter activity | 2.82E-04 |
| 22 | GO:0004614: phosphoglucomutase activity | 2.82E-04 |
| 23 | GO:0004310: farnesyl-diphosphate farnesyltransferase activity | 2.82E-04 |
| 24 | GO:0010291: carotene beta-ring hydroxylase activity | 2.82E-04 |
| 25 | GO:0017118: lipoyltransferase activity | 2.82E-04 |
| 26 | GO:0016868: intramolecular transferase activity, phosphotransferases | 2.82E-04 |
| 27 | GO:0004618: phosphoglycerate kinase activity | 2.82E-04 |
| 28 | GO:0010297: heteropolysaccharide binding | 2.82E-04 |
| 29 | GO:0004326: tetrahydrofolylpolyglutamate synthase activity | 2.82E-04 |
| 30 | GO:0016415: octanoyltransferase activity | 2.82E-04 |
| 31 | GO:0005528: FK506 binding | 4.18E-04 |
| 32 | GO:0004148: dihydrolipoyl dehydrogenase activity | 4.65E-04 |
| 33 | GO:0004751: ribose-5-phosphate isomerase activity | 4.65E-04 |
| 34 | GO:0004781: sulfate adenylyltransferase (ATP) activity | 4.65E-04 |
| 35 | GO:0001872: (1->3)-beta-D-glucan binding | 6.66E-04 |
| 36 | GO:0004322: ferroxidase activity | 6.66E-04 |
| 37 | GO:0048027: mRNA 5'-UTR binding | 6.66E-04 |
| 38 | GO:0008199: ferric iron binding | 6.66E-04 |
| 39 | GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity | 6.66E-04 |
| 40 | GO:0051082: unfolded protein binding | 7.42E-04 |
| 41 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 8.84E-04 |
| 42 | GO:0016987: sigma factor activity | 8.84E-04 |
| 43 | GO:0001053: plastid sigma factor activity | 8.84E-04 |
| 44 | GO:0004356: glutamate-ammonia ligase activity | 1.12E-03 |
| 45 | GO:0080030: methyl indole-3-acetate esterase activity | 1.37E-03 |
| 46 | GO:0042578: phosphoric ester hydrolase activity | 1.37E-03 |
| 47 | GO:0043295: glutathione binding | 1.92E-03 |
| 48 | GO:0003843: 1,3-beta-D-glucan synthase activity | 2.54E-03 |
| 49 | GO:0004364: glutathione transferase activity | 2.87E-03 |
| 50 | GO:0005524: ATP binding | 3.00E-03 |
| 51 | GO:0004674: protein serine/threonine kinase activity | 3.03E-03 |
| 52 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 3.48E-03 |
| 53 | GO:0031072: heat shock protein binding | 4.71E-03 |
| 54 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 5.98E-03 |
| 55 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 5.98E-03 |
| 56 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 5.98E-03 |
| 57 | GO:0019843: rRNA binding | 7.14E-03 |
| 58 | GO:0033612: receptor serine/threonine kinase binding | 7.34E-03 |
| 59 | GO:0003824: catalytic activity | 8.07E-03 |
| 60 | GO:0003756: protein disulfide isomerase activity | 8.80E-03 |
| 61 | GO:0004812: aminoacyl-tRNA ligase activity | 9.31E-03 |
| 62 | GO:0050662: coenzyme binding | 1.09E-02 |
| 63 | GO:0048038: quinone binding | 1.20E-02 |
| 64 | GO:0004672: protein kinase activity | 1.25E-02 |
| 65 | GO:0004518: nuclease activity | 1.26E-02 |
| 66 | GO:0008483: transaminase activity | 1.44E-02 |
| 67 | GO:0016597: amino acid binding | 1.50E-02 |
| 68 | GO:0030247: polysaccharide binding | 1.75E-02 |
| 69 | GO:0000982: transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding | 1.82E-02 |
| 70 | GO:0008236: serine-type peptidase activity | 1.82E-02 |
| 71 | GO:0050897: cobalt ion binding | 2.09E-02 |
| 72 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 2.23E-02 |
| 73 | GO:0003746: translation elongation factor activity | 2.23E-02 |
| 74 | GO:0000987: core promoter proximal region sequence-specific DNA binding | 2.30E-02 |
| 75 | GO:0050661: NADP binding | 2.44E-02 |
| 76 | GO:0005509: calcium ion binding | 2.48E-02 |
| 77 | GO:0043621: protein self-association | 2.82E-02 |
| 78 | GO:0051537: 2 iron, 2 sulfur cluster binding | 2.82E-02 |
| 79 | GO:0005198: structural molecule activity | 2.90E-02 |
| 80 | GO:0004519: endonuclease activity | 3.05E-02 |
| 81 | GO:0051287: NAD binding | 3.06E-02 |
| 82 | GO:0005515: protein binding | 3.13E-02 |
| 83 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 3.30E-02 |
| 84 | GO:0016491: oxidoreductase activity | 3.86E-02 |
| 85 | GO:0022857: transmembrane transporter activity | 4.06E-02 |
| 86 | GO:0016746: transferase activity, transferring acyl groups | 4.33E-02 |
| 87 | GO:0003729: mRNA binding | 4.48E-02 |
| 88 | GO:0016758: transferase activity, transferring hexosyl groups | 4.88E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009344: nitrite reductase complex [NAD(P)H] | 0.00E+00 |
| 2 | GO:0005948: acetolactate synthase complex | 0.00E+00 |
| 3 | GO:0009507: chloroplast | 1.71E-26 |
| 4 | GO:0009941: chloroplast envelope | 1.35E-14 |
| 5 | GO:0009570: chloroplast stroma | 2.24E-14 |
| 6 | GO:0009535: chloroplast thylakoid membrane | 8.27E-14 |
| 7 | GO:0009543: chloroplast thylakoid lumen | 2.99E-10 |
| 8 | GO:0010319: stromule | 1.08E-09 |
| 9 | GO:0009579: thylakoid | 6.52E-09 |
| 10 | GO:0031969: chloroplast membrane | 6.10E-06 |
| 11 | GO:0005960: glycine cleavage complex | 6.65E-06 |
| 12 | GO:0030095: chloroplast photosystem II | 8.47E-06 |
| 13 | GO:0009654: photosystem II oxygen evolving complex | 1.77E-05 |
| 14 | GO:0048046: apoplast | 2.28E-05 |
| 15 | GO:0019898: extrinsic component of membrane | 5.83E-05 |
| 16 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.20E-04 |
| 17 | GO:0009534: chloroplast thylakoid | 1.27E-04 |
| 18 | GO:0000427: plastid-encoded plastid RNA polymerase complex | 2.82E-04 |
| 19 | GO:0031977: thylakoid lumen | 2.90E-04 |
| 20 | GO:0055035: plastid thylakoid membrane | 1.12E-03 |
| 21 | GO:0022626: cytosolic ribosome | 2.25E-03 |
| 22 | GO:0005779: integral component of peroxisomal membrane | 2.54E-03 |
| 23 | GO:0000148: 1,3-beta-D-glucan synthase complex | 2.54E-03 |
| 24 | GO:0016324: apical plasma membrane | 3.57E-03 |
| 25 | GO:0009508: plastid chromosome | 4.71E-03 |
| 26 | GO:0010287: plastoglobule | 6.76E-03 |
| 27 | GO:0005759: mitochondrial matrix | 8.97E-03 |
| 28 | GO:0009523: photosystem II | 1.15E-02 |
| 29 | GO:0046658: anchored component of plasma membrane | 1.31E-02 |
| 30 | GO:0009295: nucleoid | 1.44E-02 |
| 31 | GO:0005778: peroxisomal membrane | 1.44E-02 |
| 32 | GO:0043231: intracellular membrane-bounded organelle | 3.09E-02 |
| 33 | GO:0005739: mitochondrion | 3.66E-02 |
| 34 | GO:0005747: mitochondrial respiratory chain complex I | 3.80E-02 |
| 35 | GO:0005886: plasma membrane | 3.81E-02 |
| 36 | GO:0009706: chloroplast inner membrane | 4.24E-02 |