GO Enrichment Analysis of Co-expressed Genes with
AT1G16500
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009312: oligosaccharide biosynthetic process | 0.00E+00 |
| 2 | GO:0048867: stem cell fate determination | 0.00E+00 |
| 3 | GO:0010499: proteasomal ubiquitin-independent protein catabolic process | 0.00E+00 |
| 4 | GO:0002764: immune response-regulating signaling pathway | 0.00E+00 |
| 5 | GO:0000303: response to superoxide | 6.91E-05 |
| 6 | GO:0055046: microgametogenesis | 1.19E-04 |
| 7 | GO:0019483: beta-alanine biosynthetic process | 1.66E-04 |
| 8 | GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine | 1.66E-04 |
| 9 | GO:0042325: regulation of phosphorylation | 1.66E-04 |
| 10 | GO:0006212: uracil catabolic process | 1.66E-04 |
| 11 | GO:0016045: detection of bacterium | 2.81E-04 |
| 12 | GO:0010359: regulation of anion channel activity | 2.81E-04 |
| 13 | GO:0010498: proteasomal protein catabolic process | 2.81E-04 |
| 14 | GO:0010116: positive regulation of abscisic acid biosynthetic process | 4.06E-04 |
| 15 | GO:2001289: lipid X metabolic process | 4.06E-04 |
| 16 | GO:0070301: cellular response to hydrogen peroxide | 4.06E-04 |
| 17 | GO:0072334: UDP-galactose transmembrane transport | 4.06E-04 |
| 18 | GO:0010104: regulation of ethylene-activated signaling pathway | 4.06E-04 |
| 19 | GO:0006809: nitric oxide biosynthetic process | 4.06E-04 |
| 20 | GO:0009399: nitrogen fixation | 4.06E-04 |
| 21 | GO:0006468: protein phosphorylation | 4.30E-04 |
| 22 | GO:0006542: glutamine biosynthetic process | 5.42E-04 |
| 23 | GO:0051123: RNA polymerase II transcriptional preinitiation complex assembly | 5.42E-04 |
| 24 | GO:0048015: phosphatidylinositol-mediated signaling | 6.87E-04 |
| 25 | GO:0006090: pyruvate metabolic process | 6.87E-04 |
| 26 | GO:0007029: endoplasmic reticulum organization | 6.87E-04 |
| 27 | GO:0009164: nucleoside catabolic process | 6.87E-04 |
| 28 | GO:1900425: negative regulation of defense response to bacterium | 8.40E-04 |
| 29 | GO:0006388: tRNA splicing, via endonucleolytic cleavage and ligation | 8.40E-04 |
| 30 | GO:0043966: histone H3 acetylation | 9.99E-04 |
| 31 | GO:0009867: jasmonic acid mediated signaling pathway | 1.12E-03 |
| 32 | GO:1902074: response to salt | 1.17E-03 |
| 33 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 1.33E-03 |
| 34 | GO:1900150: regulation of defense response to fungus | 1.34E-03 |
| 35 | GO:0006875: cellular metal ion homeostasis | 1.34E-03 |
| 36 | GO:0010204: defense response signaling pathway, resistance gene-independent | 1.53E-03 |
| 37 | GO:0043562: cellular response to nitrogen levels | 1.53E-03 |
| 38 | GO:0009051: pentose-phosphate shunt, oxidative branch | 1.73E-03 |
| 39 | GO:0010629: negative regulation of gene expression | 2.14E-03 |
| 40 | GO:0072593: reactive oxygen species metabolic process | 2.36E-03 |
| 41 | GO:0006352: DNA-templated transcription, initiation | 2.36E-03 |
| 42 | GO:0010152: pollen maturation | 2.58E-03 |
| 43 | GO:0071365: cellular response to auxin stimulus | 2.58E-03 |
| 44 | GO:0000266: mitochondrial fission | 2.58E-03 |
| 45 | GO:0012501: programmed cell death | 2.58E-03 |
| 46 | GO:0006108: malate metabolic process | 2.82E-03 |
| 47 | GO:0010102: lateral root morphogenesis | 2.82E-03 |
| 48 | GO:0006807: nitrogen compound metabolic process | 2.82E-03 |
| 49 | GO:0046854: phosphatidylinositol phosphorylation | 3.30E-03 |
| 50 | GO:0080147: root hair cell development | 3.81E-03 |
| 51 | GO:2000377: regulation of reactive oxygen species metabolic process | 3.81E-03 |
| 52 | GO:0010073: meristem maintenance | 4.08E-03 |
| 53 | GO:0006874: cellular calcium ion homeostasis | 4.08E-03 |
| 54 | GO:0046686: response to cadmium ion | 4.30E-03 |
| 55 | GO:0016998: cell wall macromolecule catabolic process | 4.35E-03 |
| 56 | GO:0051260: protein homooligomerization | 4.35E-03 |
| 57 | GO:0009561: megagametogenesis | 5.20E-03 |
| 58 | GO:0006885: regulation of pH | 6.11E-03 |
| 59 | GO:0010193: response to ozone | 7.07E-03 |
| 60 | GO:0010583: response to cyclopentenone | 7.40E-03 |
| 61 | GO:0016032: viral process | 7.40E-03 |
| 62 | GO:0006970: response to osmotic stress | 7.68E-03 |
| 63 | GO:0006904: vesicle docking involved in exocytosis | 8.42E-03 |
| 64 | GO:0009816: defense response to bacterium, incompatible interaction | 9.50E-03 |
| 65 | GO:0042128: nitrate assimilation | 9.87E-03 |
| 66 | GO:0045454: cell redox homeostasis | 1.06E-02 |
| 67 | GO:0009407: toxin catabolic process | 1.18E-02 |
| 68 | GO:0045087: innate immune response | 1.30E-02 |
| 69 | GO:0006099: tricarboxylic acid cycle | 1.34E-02 |
| 70 | GO:0006887: exocytosis | 1.47E-02 |
| 71 | GO:0006897: endocytosis | 1.47E-02 |
| 72 | GO:0000209: protein polyubiquitination | 1.60E-02 |
| 73 | GO:0009636: response to toxic substance | 1.69E-02 |
| 74 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 1.78E-02 |
| 75 | GO:0006812: cation transport | 1.83E-02 |
| 76 | GO:0009846: pollen germination | 1.83E-02 |
| 77 | GO:0042538: hyperosmotic salinity response | 1.83E-02 |
| 78 | GO:0009736: cytokinin-activated signaling pathway | 1.92E-02 |
| 79 | GO:0009809: lignin biosynthetic process | 1.92E-02 |
| 80 | GO:0006813: potassium ion transport | 1.92E-02 |
| 81 | GO:0006096: glycolytic process | 2.17E-02 |
| 82 | GO:0009626: plant-type hypersensitive response | 2.27E-02 |
| 83 | GO:0009620: response to fungus | 2.32E-02 |
| 84 | GO:0051726: regulation of cell cycle | 2.58E-02 |
| 85 | GO:0009790: embryo development | 3.24E-02 |
| 86 | GO:0016036: cellular response to phosphate starvation | 3.47E-02 |
| 87 | GO:0006413: translational initiation | 3.47E-02 |
| 88 | GO:0010150: leaf senescence | 3.65E-02 |
| 89 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 3.95E-02 |
| 90 | GO:0006470: protein dephosphorylation | 4.01E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016504: peptidase activator activity | 0.00E+00 |
| 2 | GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity | 0.00E+00 |
| 3 | GO:0003837: beta-ureidopropionase activity | 0.00E+00 |
| 4 | GO:0070577: lysine-acetylated histone binding | 0.00E+00 |
| 5 | GO:0001102: RNA polymerase II activating transcription factor binding | 6.91E-05 |
| 6 | GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity | 6.91E-05 |
| 7 | GO:0016303: 1-phosphatidylinositol-3-kinase activity | 6.91E-05 |
| 8 | GO:0004112: cyclic-nucleotide phosphodiesterase activity | 6.91E-05 |
| 9 | GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity | 6.91E-05 |
| 10 | GO:0003955: NAD(P)H dehydrogenase (quinone) activity | 2.81E-04 |
| 11 | GO:0016805: dipeptidase activity | 2.81E-04 |
| 12 | GO:0004473: malate dehydrogenase (decarboxylating) (NADP+) activity | 2.81E-04 |
| 13 | GO:0019829: cation-transporting ATPase activity | 2.81E-04 |
| 14 | GO:0016301: kinase activity | 2.94E-04 |
| 15 | GO:0070628: proteasome binding | 5.42E-04 |
| 16 | GO:0004470: malic enzyme activity | 5.42E-04 |
| 17 | GO:0016652: oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor | 5.42E-04 |
| 18 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 5.42E-04 |
| 19 | GO:0004471: malate dehydrogenase (decarboxylating) (NAD+) activity | 5.42E-04 |
| 20 | GO:0019199: transmembrane receptor protein kinase activity | 5.42E-04 |
| 21 | GO:0004674: protein serine/threonine kinase activity | 5.52E-04 |
| 22 | GO:0004356: glutamate-ammonia ligase activity | 6.87E-04 |
| 23 | GO:0005459: UDP-galactose transmembrane transporter activity | 6.87E-04 |
| 24 | GO:0008948: oxaloacetate decarboxylase activity | 6.87E-04 |
| 25 | GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 9.99E-04 |
| 26 | GO:0003950: NAD+ ADP-ribosyltransferase activity | 9.99E-04 |
| 27 | GO:0008235: metalloexopeptidase activity | 1.17E-03 |
| 28 | GO:0052747: sinapyl alcohol dehydrogenase activity | 1.34E-03 |
| 29 | GO:0030955: potassium ion binding | 1.93E-03 |
| 30 | GO:0004743: pyruvate kinase activity | 1.93E-03 |
| 31 | GO:0005524: ATP binding | 2.00E-03 |
| 32 | GO:0004713: protein tyrosine kinase activity | 2.14E-03 |
| 33 | GO:0004177: aminopeptidase activity | 2.36E-03 |
| 34 | GO:0045551: cinnamyl-alcohol dehydrogenase activity | 2.58E-03 |
| 35 | GO:0019888: protein phosphatase regulator activity | 2.82E-03 |
| 36 | GO:0005388: calcium-transporting ATPase activity | 2.82E-03 |
| 37 | GO:0017025: TBP-class protein binding | 3.30E-03 |
| 38 | GO:0043424: protein histidine kinase binding | 4.08E-03 |
| 39 | GO:0005451: monovalent cation:proton antiporter activity | 5.80E-03 |
| 40 | GO:0004402: histone acetyltransferase activity | 5.80E-03 |
| 41 | GO:0015299: solute:proton antiporter activity | 6.42E-03 |
| 42 | GO:0010181: FMN binding | 6.42E-03 |
| 43 | GO:0046982: protein heterodimerization activity | 7.00E-03 |
| 44 | GO:0015385: sodium:proton antiporter activity | 7.73E-03 |
| 45 | GO:0008375: acetylglucosaminyltransferase activity | 9.87E-03 |
| 46 | GO:0030145: manganese ion binding | 1.22E-02 |
| 47 | GO:0004364: glutathione transferase activity | 1.51E-02 |
| 48 | GO:0004672: protein kinase activity | 1.71E-02 |
| 49 | GO:0051287: NAD binding | 1.78E-02 |
| 50 | GO:0003690: double-stranded DNA binding | 1.97E-02 |
| 51 | GO:0016887: ATPase activity | 2.03E-02 |
| 52 | GO:0015035: protein disulfide oxidoreductase activity | 2.52E-02 |
| 53 | GO:0016746: transferase activity, transferring acyl groups | 2.52E-02 |
| 54 | GO:0030246: carbohydrate binding | 3.13E-02 |
| 55 | GO:0008017: microtubule binding | 3.77E-02 |
| 56 | GO:0003743: translation initiation factor activity | 4.07E-02 |
| 57 | GO:0005515: protein binding | 4.83E-02 |
| 58 | GO:0000287: magnesium ion binding | 4.91E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005942: phosphatidylinositol 3-kinase complex | 0.00E+00 |
| 2 | GO:0005886: plasma membrane | 1.99E-07 |
| 3 | GO:0045252: oxoglutarate dehydrogenase complex | 6.91E-05 |
| 4 | GO:0000124: SAGA complex | 1.66E-04 |
| 5 | GO:0005789: endoplasmic reticulum membrane | 1.87E-04 |
| 6 | GO:0070062: extracellular exosome | 4.06E-04 |
| 7 | GO:0016021: integral component of membrane | 4.32E-04 |
| 8 | GO:0030173: integral component of Golgi membrane | 9.99E-04 |
| 9 | GO:0016363: nuclear matrix | 9.99E-04 |
| 10 | GO:0005669: transcription factor TFIID complex | 1.34E-03 |
| 11 | GO:0005829: cytosol | 1.60E-03 |
| 12 | GO:0030176: integral component of endoplasmic reticulum membrane | 3.30E-03 |
| 13 | GO:0005795: Golgi stack | 3.30E-03 |
| 14 | GO:0005774: vacuolar membrane | 3.89E-03 |
| 15 | GO:0005783: endoplasmic reticulum | 4.03E-03 |
| 16 | GO:0005839: proteasome core complex | 4.35E-03 |
| 17 | GO:0000145: exocyst | 7.40E-03 |
| 18 | GO:0005794: Golgi apparatus | 9.15E-03 |
| 19 | GO:0000786: nucleosome | 1.26E-02 |
| 20 | GO:0031902: late endosome membrane | 1.47E-02 |
| 21 | GO:0000139: Golgi membrane | 1.54E-02 |
| 22 | GO:0016020: membrane | 1.73E-02 |
| 23 | GO:0012505: endomembrane system | 2.42E-02 |
| 24 | GO:0005773: vacuole | 2.71E-02 |
| 25 | GO:0009543: chloroplast thylakoid lumen | 2.90E-02 |
| 26 | GO:0005623: cell | 2.96E-02 |
| 27 | GO:0009524: phragmoplast | 3.01E-02 |
| 28 | GO:0009506: plasmodesma | 3.86E-02 |