co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G15890

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006987: activation of signaling protein activity involved in unfolded protein response	0.00E+00
2	GO:0007141: male meiosis I	0.00E+00
3	GO:0010499: proteasomal ubiquitin-independent protein catabolic process	0.00E+00
4	GO:0010398: xylogalacturonan metabolic process	0.00E+00
5	GO:0033542: fatty acid beta-oxidation, unsaturated, even number	0.00E+00
6	GO:0006212: uracil catabolic process	2.61E-06
7	GO:0019483: beta-alanine biosynthetic process	2.61E-06
8	GO:0048194: Golgi vesicle budding	2.15E-05
9	GO:0009819: drought recovery	2.12E-04
10	GO:0010941: regulation of cell death	2.36E-04
11	GO:0035344: hypoxanthine transport	2.36E-04
12	GO:0071366: cellular response to indolebutyric acid stimulus	2.36E-04
13	GO:0002143: tRNA wobble position uridine thiolation	2.36E-04
14	GO:0006643: membrane lipid metabolic process	2.36E-04
15	GO:0098721: uracil import across plasma membrane	2.36E-04
16	GO:0042759: long-chain fatty acid biosynthetic process	2.36E-04
17	GO:0010266: response to vitamin B1	2.36E-04
18	GO:0098702: adenine import across plasma membrane	2.36E-04
19	GO:0090421: embryonic meristem initiation	2.36E-04
20	GO:0098710: guanine import across plasma membrane	2.36E-04
21	GO:0043562: cellular response to nitrogen levels	2.63E-04
22	GO:0006468: protein phosphorylation	2.66E-04
23	GO:0043069: negative regulation of programmed cell death	4.42E-04
24	GO:0051258: protein polymerization	5.24E-04
25	GO:1902000: homogentisate catabolic process	5.24E-04
26	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	5.24E-04
27	GO:0019441: tryptophan catabolic process to kynurenine	5.24E-04
28	GO:0015914: phospholipid transport	5.24E-04
29	GO:0006499: N-terminal protein myristoylation	6.43E-04
30	GO:0055046: microgametogenesis	6.63E-04
31	GO:0010053: root epidermal cell differentiation	8.34E-04
32	GO:1900055: regulation of leaf senescence	8.52E-04
33	GO:0042344: indole glucosinolate catabolic process	8.52E-04
34	GO:0010498: proteasomal protein catabolic process	8.52E-04
35	GO:0010359: regulation of anion channel activity	8.52E-04
36	GO:0061158: 3'-UTR-mediated mRNA destabilization	8.52E-04
37	GO:0009072: aromatic amino acid family metabolic process	8.52E-04
38	GO:0048281: inflorescence morphogenesis	8.52E-04
39	GO:0010150: leaf senescence	8.66E-04
40	GO:2000377: regulation of reactive oxygen species metabolic process	1.02E-03
41	GO:0072334: UDP-galactose transmembrane transport	1.21E-03
42	GO:0009399: nitrogen fixation	1.21E-03
43	GO:0072583: clathrin-dependent endocytosis	1.21E-03
44	GO:0046513: ceramide biosynthetic process	1.21E-03
45	GO:0010116: positive regulation of abscisic acid biosynthetic process	1.21E-03
46	GO:0031348: negative regulation of defense response	1.35E-03
47	GO:0006542: glutamine biosynthetic process	1.62E-03
48	GO:0060548: negative regulation of cell death	1.62E-03
49	GO:0033320: UDP-D-xylose biosynthetic process	1.62E-03
50	GO:0030308: negative regulation of cell growth	2.07E-03
51	GO:0048015: phosphatidylinositol-mediated signaling	2.07E-03
52	GO:0006090: pyruvate metabolic process	2.07E-03
53	GO:0007029: endoplasmic reticulum organization	2.07E-03
54	GO:0009738: abscisic acid-activated signaling pathway	2.43E-03
55	GO:1902456: regulation of stomatal opening	2.55E-03
56	GO:1900425: negative regulation of defense response to bacterium	2.55E-03
57	GO:0002238: response to molecule of fungal origin	2.55E-03
58	GO:0015691: cadmium ion transport	2.55E-03
59	GO:0006777: Mo-molybdopterin cofactor biosynthetic process	2.55E-03
60	GO:0048232: male gamete generation	2.55E-03
61	GO:0042732: D-xylose metabolic process	2.55E-03
62	GO:0046777: protein autophosphorylation	2.56E-03
63	GO:0042742: defense response to bacterium	2.60E-03
64	GO:0000911: cytokinesis by cell plate formation	3.06E-03
65	GO:0009612: response to mechanical stimulus	3.06E-03
66	GO:0051607: defense response to virus	3.36E-03
67	GO:0070370: cellular heat acclimation	3.61E-03
68	GO:1902074: response to salt	3.61E-03
69	GO:0010044: response to aluminum ion	3.61E-03
70	GO:0046470: phosphatidylcholine metabolic process	3.61E-03
71	GO:0043090: amino acid import	3.61E-03
72	GO:0009816: defense response to bacterium, incompatible interaction	3.76E-03
73	GO:0009627: systemic acquired resistance	3.97E-03
74	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	4.19E-03
75	GO:1900150: regulation of defense response to fungus	4.19E-03
76	GO:0008219: cell death	4.64E-03
77	GO:0009880: embryonic pattern specification	4.79E-03
78	GO:0006952: defense response	4.79E-03
79	GO:0006367: transcription initiation from RNA polymerase II promoter	4.79E-03
80	GO:0030968: endoplasmic reticulum unfolded protein response	4.79E-03
81	GO:0006002: fructose 6-phosphate metabolic process	4.79E-03
82	GO:0006075: (1->3)-beta-D-glucan biosynthetic process	4.79E-03
83	GO:0010119: regulation of stomatal movement	5.36E-03
84	GO:0009821: alkaloid biosynthetic process	5.43E-03
85	GO:0001708: cell fate specification	5.43E-03
86	GO:0007338: single fertilization	5.43E-03
87	GO:0009051: pentose-phosphate shunt, oxidative branch	5.43E-03
88	GO:0008202: steroid metabolic process	6.09E-03
89	GO:0006995: cellular response to nitrogen starvation	6.78E-03
90	GO:0051026: chiasma assembly	6.78E-03
91	GO:0009870: defense response signaling pathway, resistance gene-dependent	6.78E-03
92	GO:0010629: negative regulation of gene expression	6.78E-03
93	GO:0052544: defense response by callose deposition in cell wall	7.50E-03
94	GO:0072593: reactive oxygen species metabolic process	7.50E-03
95	GO:0030148: sphingolipid biosynthetic process	7.50E-03
96	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	8.25E-03
97	GO:0071365: cellular response to auxin stimulus	8.25E-03
98	GO:0000266: mitochondrial fission	8.25E-03
99	GO:0006807: nitrogen compound metabolic process	9.02E-03
100	GO:0006108: malate metabolic process	9.02E-03
101	GO:0006970: response to osmotic stress	9.13E-03
102	GO:0034605: cellular response to heat	9.82E-03
103	GO:0002237: response to molecule of bacterial origin	9.82E-03
104	GO:0070588: calcium ion transmembrane transport	1.06E-02
105	GO:0046854: phosphatidylinositol phosphorylation	1.06E-02
106	GO:0009225: nucleotide-sugar metabolic process	1.06E-02
107	GO:0010200: response to chitin	1.14E-02
108	GO:0034976: response to endoplasmic reticulum stress	1.15E-02
109	GO:0006096: glycolytic process	1.21E-02
110	GO:0080147: root hair cell development	1.24E-02
111	GO:0006874: cellular calcium ion homeostasis	1.32E-02
112	GO:0031408: oxylipin biosynthetic process	1.42E-02
113	GO:0051260: protein homooligomerization	1.42E-02
114	GO:0018105: peptidyl-serine phosphorylation	1.50E-02
115	GO:0007131: reciprocal meiotic recombination	1.51E-02
116	GO:0071456: cellular response to hypoxia	1.51E-02
117	GO:0071215: cellular response to abscisic acid stimulus	1.61E-02
118	GO:0006012: galactose metabolic process	1.61E-02
119	GO:0009561: megagametogenesis	1.70E-02
120	GO:0010584: pollen exine formation	1.70E-02
121	GO:0016042: lipid catabolic process	1.73E-02
122	GO:0009751: response to salicylic acid	1.76E-02
123	GO:0042147: retrograde transport, endosome to Golgi	1.80E-02
124	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.80E-02
125	GO:0046686: response to cadmium ion	1.90E-02
126	GO:0042631: cellular response to water deprivation	1.91E-02
127	GO:0008360: regulation of cell shape	2.01E-02
128	GO:0045489: pectin biosynthetic process	2.01E-02
129	GO:0010197: polar nucleus fusion	2.01E-02
130	GO:0046323: glucose import	2.01E-02
131	GO:0048544: recognition of pollen	2.12E-02
132	GO:0061025: membrane fusion	2.12E-02
133	GO:0006623: protein targeting to vacuole	2.23E-02
134	GO:0055114: oxidation-reduction process	2.28E-02
135	GO:0000302: response to reactive oxygen species	2.34E-02
136	GO:0006891: intra-Golgi vesicle-mediated transport	2.34E-02
137	GO:0007264: small GTPase mediated signal transduction	2.45E-02
138	GO:0006914: autophagy	2.68E-02
139	GO:0006310: DNA recombination	2.68E-02
140	GO:0009567: double fertilization forming a zygote and endosperm	2.68E-02
141	GO:0006904: vesicle docking involved in exocytosis	2.80E-02
142	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	2.83E-02
143	GO:0006470: protein dephosphorylation	2.89E-02
144	GO:0007166: cell surface receptor signaling pathway	2.89E-02
145	GO:0006979: response to oxidative stress	2.91E-02
146	GO:0009615: response to virus	3.04E-02
147	GO:0009607: response to biotic stimulus	3.16E-02
148	GO:0009737: response to abscisic acid	3.22E-02
149	GO:0042128: nitrate assimilation	3.29E-02
150	GO:0006888: ER to Golgi vesicle-mediated transport	3.41E-02
151	GO:0048573: photoperiodism, flowering	3.41E-02
152	GO:0006950: response to stress	3.41E-02
153	GO:0009817: defense response to fungus, incompatible interaction	3.67E-02
154	GO:0010311: lateral root formation	3.80E-02
155	GO:0009813: flavonoid biosynthetic process	3.80E-02
156	GO:0035556: intracellular signal transduction	3.92E-02
157	GO:0009407: toxin catabolic process	3.93E-02
158	GO:0015031: protein transport	4.07E-02
159	GO:0006865: amino acid transport	4.20E-02
160	GO:0006099: tricarboxylic acid cycle	4.48E-02
161	GO:0006887: exocytosis	4.90E-02
162	GO:0006897: endocytosis	4.90E-02
163	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	4.98E-02

Rank	GO Term	Adjusted P value
1	GO:0070577: lysine-acetylated histone binding	0.00E+00
2	GO:0015591: D-ribose transmembrane transporter activity	0.00E+00
3	GO:0015575: mannitol transmembrane transporter activity	0.00E+00
4	GO:0061605: molybdopterin-synthase adenylyltransferase activity	0.00E+00
5	GO:0015148: D-xylose transmembrane transporter activity	0.00E+00
6	GO:0004157: dihydropyrimidinase activity	0.00E+00
7	GO:0016504: peptidase activator activity	0.00E+00
8	GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity	0.00E+00
9	GO:0005365: myo-inositol transmembrane transporter activity	0.00E+00
10	GO:0016034: maleylacetoacetate isomerase activity	0.00E+00
11	GO:0015576: sorbitol transmembrane transporter activity	0.00E+00
12	GO:0015370: solute:sodium symporter activity	0.00E+00
13	GO:0061604: molybdopterin-synthase sulfurtransferase activity	0.00E+00
14	GO:0003837: beta-ureidopropionase activity	0.00E+00
15	GO:0004012: phospholipid-translocating ATPase activity	1.77E-06
16	GO:0005524: ATP binding	1.19E-05
17	GO:0004713: protein tyrosine kinase activity	1.58E-05
18	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	3.19E-05
19	GO:0016301: kinase activity	1.03E-04
20	GO:0016303: 1-phosphatidylinositol-3-kinase activity	2.36E-04
21	GO:0015208: guanine transmembrane transporter activity	2.36E-04
22	GO:0015294: solute:cation symporter activity	2.36E-04
23	GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity	2.36E-04
24	GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity	2.36E-04
25	GO:0015207: adenine transmembrane transporter activity	2.36E-04
26	GO:0019707: protein-cysteine S-acyltransferase activity	2.36E-04
27	GO:0015168: glycerol transmembrane transporter activity	2.36E-04
28	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	2.36E-04
29	GO:0032050: clathrin heavy chain binding	2.36E-04
30	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	2.63E-04
31	GO:0004630: phospholipase D activity	2.63E-04
32	GO:0071949: FAD binding	3.18E-04
33	GO:0005516: calmodulin binding	3.81E-04
34	GO:0032934: sterol binding	5.24E-04
35	GO:0045140: inositol phosphoceramide synthase activity	5.24E-04
36	GO:0004061: arylformamidase activity	5.24E-04
37	GO:0050291: sphingosine N-acyltransferase activity	5.24E-04
38	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	8.52E-04
39	GO:0016595: glutamate binding	8.52E-04
40	GO:0004473: malate dehydrogenase (decarboxylating) (NADP+) activity	8.52E-04
41	GO:0008265: Mo-molybdopterin cofactor sulfurase activity	8.52E-04
42	GO:0015086: cadmium ion transmembrane transporter activity	1.21E-03
43	GO:0004792: thiosulfate sulfurtransferase activity	1.21E-03
44	GO:0005354: galactose transmembrane transporter activity	1.21E-03
45	GO:0004674: protein serine/threonine kinase activity	1.32E-03
46	GO:0015210: uracil transmembrane transporter activity	1.62E-03
47	GO:0070628: proteasome binding	1.62E-03
48	GO:0004470: malic enzyme activity	1.62E-03
49	GO:0000287: magnesium ion binding	1.62E-03
50	GO:0016652: oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor	1.62E-03
51	GO:0015204: urea transmembrane transporter activity	1.62E-03
52	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.62E-03
53	GO:0004471: malate dehydrogenase (decarboxylating) (NAD+) activity	1.62E-03
54	GO:0008641: small protein activating enzyme activity	2.07E-03
55	GO:0008948: oxaloacetate decarboxylase activity	2.07E-03
56	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	2.07E-03
57	GO:0005496: steroid binding	2.07E-03
58	GO:0004356: glutamate-ammonia ligase activity	2.07E-03
59	GO:0045431: flavonol synthase activity	2.07E-03
60	GO:0005459: UDP-galactose transmembrane transporter activity	2.07E-03
61	GO:0015145: monosaccharide transmembrane transporter activity	2.07E-03
62	GO:0016853: isomerase activity	2.15E-03
63	GO:0035252: UDP-xylosyltransferase activity	2.55E-03
64	GO:0048040: UDP-glucuronate decarboxylase activity	2.55E-03
65	GO:0004656: procollagen-proline 4-dioxygenase activity	3.06E-03
66	GO:0070403: NAD+ binding	3.06E-03
67	GO:0003872: 6-phosphofructokinase activity	3.61E-03
68	GO:0008143: poly(A) binding	3.61E-03
69	GO:0004620: phospholipase activity	3.61E-03
70	GO:0009931: calcium-dependent protein serine/threonine kinase activity	3.97E-03
71	GO:0004034: aldose 1-epimerase activity	4.19E-03
72	GO:0052747: sinapyl alcohol dehydrogenase activity	4.19E-03
73	GO:0004683: calmodulin-dependent protein kinase activity	4.19E-03
74	GO:0008142: oxysterol binding	4.79E-03
75	GO:0003843: 1,3-beta-D-glucan synthase activity	4.79E-03
76	GO:0046872: metal ion binding	5.32E-03
77	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	5.87E-03
78	GO:0030955: potassium ion binding	6.09E-03
79	GO:0016844: strictosidine synthase activity	6.09E-03
80	GO:0004743: pyruvate kinase activity	6.09E-03
81	GO:0004712: protein serine/threonine/tyrosine kinase activity	6.41E-03
82	GO:0004364: glutathione transferase activity	7.27E-03
83	GO:0005543: phospholipid binding	7.50E-03
84	GO:0001054: RNA polymerase I activity	7.50E-03
85	GO:0047372: acylglycerol lipase activity	7.50E-03
86	GO:0045551: cinnamyl-alcohol dehydrogenase activity	8.25E-03
87	GO:0004521: endoribonuclease activity	8.25E-03
88	GO:0005198: structural molecule activity	8.51E-03
89	GO:0015293: symporter activity	8.51E-03
90	GO:0005388: calcium-transporting ATPase activity	9.02E-03
91	GO:0004022: alcohol dehydrogenase (NAD) activity	9.02E-03
92	GO:0005217: intracellular ligand-gated ion channel activity	1.06E-02
93	GO:0004970: ionotropic glutamate receptor activity	1.06E-02
94	GO:0004190: aspartic-type endopeptidase activity	1.06E-02
95	GO:0004497: monooxygenase activity	1.09E-02
96	GO:0031418: L-ascorbic acid binding	1.24E-02
97	GO:0003954: NADH dehydrogenase activity	1.24E-02
98	GO:0043130: ubiquitin binding	1.24E-02
99	GO:0033612: receptor serine/threonine kinase binding	1.42E-02
100	GO:0019706: protein-cysteine S-palmitoyltransferase activity	1.42E-02
101	GO:0003756: protein disulfide isomerase activity	1.70E-02
102	GO:0003727: single-stranded RNA binding	1.70E-02
103	GO:0005515: protein binding	1.73E-02
104	GO:0005355: glucose transmembrane transporter activity	2.12E-02
105	GO:0010181: FMN binding	2.12E-02
106	GO:0015144: carbohydrate transmembrane transporter activity	2.19E-02
107	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	2.36E-02
108	GO:0005351: sugar:proton symporter activity	2.47E-02
109	GO:0005509: calcium ion binding	2.55E-02
110	GO:0051213: dioxygenase activity	3.04E-02
111	GO:0003824: catalytic activity	3.29E-02
112	GO:0030247: polysaccharide binding	3.41E-02
113	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	3.54E-02
114	GO:0005096: GTPase activator activity	3.80E-02
115	GO:0016491: oxidoreductase activity	4.28E-02
116	GO:0043531: ADP binding	4.28E-02
117	GO:0003697: single-stranded DNA binding	4.34E-02
118	GO:0016740: transferase activity	4.68E-02
119	GO:0004672: protein kinase activity	5.00E-02

Rank	GO Term	Adjusted P value
1	GO:0005674: transcription factor TFIIF complex	0.00E+00
2	GO:0005942: phosphatidylinositol 3-kinase complex	0.00E+00
3	GO:0005886: plasma membrane	7.36E-09
4	GO:0005783: endoplasmic reticulum	1.35E-05
5	GO:0005829: cytosol	1.17E-04
6	GO:0016021: integral component of membrane	1.35E-04
7	GO:0005794: Golgi apparatus	1.41E-04
8	GO:0045252: oxoglutarate dehydrogenase complex	2.36E-04
9	GO:0000138: Golgi trans cisterna	2.36E-04
10	GO:0005802: trans-Golgi network	4.40E-04
11	GO:0031304: intrinsic component of mitochondrial inner membrane	5.24E-04
12	GO:0016020: membrane	7.32E-04
13	GO:0042406: extrinsic component of endoplasmic reticulum membrane	8.52E-04
14	GO:0005789: endoplasmic reticulum membrane	1.88E-03
15	GO:0030126: COPI vesicle coat	2.07E-03
16	GO:0005945: 6-phosphofructokinase complex	2.07E-03
17	GO:0009504: cell plate	2.31E-03
18	GO:0030173: integral component of Golgi membrane	3.06E-03
19	GO:0005773: vacuole	4.28E-03
20	GO:0000139: Golgi membrane	4.73E-03
21	GO:0000148: 1,3-beta-D-glucan synthase complex	4.79E-03
22	GO:0010494: cytoplasmic stress granule	5.43E-03
23	GO:0005736: DNA-directed RNA polymerase I complex	5.43E-03
24	GO:0030125: clathrin vesicle coat	6.78E-03
25	GO:0017119: Golgi transport complex	6.78E-03
26	GO:0048471: perinuclear region of cytoplasm	7.50E-03
27	GO:0030176: integral component of endoplasmic reticulum membrane	1.06E-02
28	GO:0005769: early endosome	1.15E-02
29	GO:0005839: proteasome core complex	1.42E-02
30	GO:0031410: cytoplasmic vesicle	1.51E-02
31	GO:0000790: nuclear chromatin	1.80E-02
32	GO:0000145: exocyst	2.45E-02
33	GO:0005887: integral component of plasma membrane	2.63E-02
34	GO:0005774: vacuolar membrane	2.88E-02
35	GO:0030529: intracellular ribonucleoprotein complex	3.04E-02
36	GO:0005788: endoplasmic reticulum lumen	3.16E-02
37	GO:0000151: ubiquitin ligase complex	3.67E-02
38	GO:0005618: cell wall	3.68E-02
39	GO:0000786: nucleosome	4.20E-02
40	GO:0031902: late endosome membrane	4.90E-02