co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G15440

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0080178: 5-carbamoylmethyl uridine residue modification	2.76E-05
2	GO:0017183: peptidyl-diphthamide biosynthetic process from peptidyl-histidine	2.76E-05
3	GO:0031538: negative regulation of anthocyanin metabolic process	7.01E-05
4	GO:0010155: regulation of proton transport	7.01E-05
5	GO:0010227: floral organ abscission	8.11E-05
6	GO:0032784: regulation of DNA-templated transcription, elongation	1.23E-04
7	GO:0048530: fruit morphogenesis	1.83E-04
8	GO:0000187: activation of MAPK activity	1.83E-04
9	GO:0072583: clathrin-dependent endocytosis	1.83E-04
10	GO:0042254: ribosome biogenesis	2.20E-04
11	GO:2000038: regulation of stomatal complex development	2.48E-04
12	GO:0031087: deadenylation-independent decapping of nuclear-transcribed mRNA	2.48E-04
13	GO:0002098: tRNA wobble uridine modification	2.48E-04
14	GO:0009229: thiamine diphosphate biosynthetic process	3.18E-04
15	GO:0009228: thiamine biosynthetic process	3.92E-04
16	GO:2000037: regulation of stomatal complex patterning	4.69E-04
17	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	4.69E-04
18	GO:0006400: tRNA modification	5.49E-04
19	GO:0010928: regulation of auxin mediated signaling pathway	6.32E-04
20	GO:0035265: organ growth	6.32E-04
21	GO:0009787: regulation of abscisic acid-activated signaling pathway	6.32E-04
22	GO:0006002: fructose 6-phosphate metabolic process	7.18E-04
23	GO:0009821: alkaloid biosynthetic process	8.07E-04
24	GO:2000024: regulation of leaf development	8.07E-04
25	GO:0072593: reactive oxygen species metabolic process	1.09E-03
26	GO:0010582: floral meristem determinacy	1.19E-03
27	GO:0010229: inflorescence development	1.29E-03
28	GO:0010102: lateral root morphogenesis	1.29E-03
29	GO:0010053: root epidermal cell differentiation	1.50E-03
30	GO:0030150: protein import into mitochondrial matrix	1.73E-03
31	GO:0009814: defense response, incompatible interaction	2.09E-03
32	GO:0071215: cellular response to abscisic acid stimulus	2.22E-03
33	GO:0008284: positive regulation of cell proliferation	2.48E-03
34	GO:0042391: regulation of membrane potential	2.61E-03
35	GO:0019760: glucosinolate metabolic process	3.60E-03
36	GO:0032259: methylation	3.86E-03
37	GO:0001666: response to hypoxia	4.06E-03
38	GO:0009615: response to virus	4.06E-03
39	GO:0009407: toxin catabolic process	5.21E-03
40	GO:0010043: response to zinc ion	5.38E-03
41	GO:0008283: cell proliferation	6.82E-03
42	GO:0009965: leaf morphogenesis	7.40E-03
43	GO:0000165: MAPK cascade	7.79E-03
44	GO:0006096: glycolytic process	9.44E-03
45	GO:0009626: plant-type hypersensitive response	9.87E-03
46	GO:0009620: response to fungus	1.01E-02
47	GO:0009624: response to nematode	1.07E-02
48	GO:0009058: biosynthetic process	1.31E-02
49	GO:0042744: hydrogen peroxide catabolic process	1.38E-02
50	GO:0071555: cell wall organization	1.45E-02
51	GO:0042742: defense response to bacterium	1.45E-02
52	GO:0006979: response to oxidative stress	1.46E-02
53	GO:0010150: leaf senescence	1.58E-02
54	GO:0045490: pectin catabolic process	1.58E-02
55	GO:0007166: cell surface receptor signaling pathway	1.74E-02
56	GO:0010468: regulation of gene expression	1.79E-02
57	GO:0006412: translation	1.88E-02
58	GO:0006952: defense response	2.04E-02
59	GO:0009826: unidimensional cell growth	2.10E-02
60	GO:0006351: transcription, DNA-templated	2.13E-02
61	GO:0005975: carbohydrate metabolic process	2.20E-02
62	GO:0009723: response to ethylene	2.39E-02
63	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.58E-02
64	GO:0046777: protein autophosphorylation	2.64E-02
65	GO:0045454: cell redox homeostasis	2.86E-02
66	GO:0006468: protein phosphorylation	3.09E-02
67	GO:0009737: response to abscisic acid	3.09E-02
68	GO:0009751: response to salicylic acid	3.29E-02
69	GO:0006397: mRNA processing	3.42E-02
70	GO:0009753: response to jasmonic acid	3.49E-02
71	GO:0009734: auxin-activated signaling pathway	4.24E-02
72	GO:0009735: response to cytokinin	4.68E-02
73	GO:0009738: abscisic acid-activated signaling pathway	4.87E-02
74	GO:0009416: response to light stimulus	4.99E-02

Rank	GO Term	Adjusted P value
1	GO:0050334: thiaminase activity	0.00E+00
2	GO:0004164: diphthine synthase activity	0.00E+00
3	GO:0050220: prostaglandin-E synthase activity	0.00E+00
4	GO:0052692: raffinose alpha-galactosidase activity	2.11E-07
5	GO:0004557: alpha-galactosidase activity	2.11E-07
6	GO:0001054: RNA polymerase I activity	2.22E-05
7	GO:0070008: serine-type exopeptidase activity	2.76E-05
8	GO:0032050: clathrin heavy chain binding	2.76E-05
9	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	2.97E-05
10	GO:0004602: glutathione peroxidase activity	4.69E-04
11	GO:0043295: glutathione binding	5.49E-04
12	GO:0003872: 6-phosphofructokinase activity	5.49E-04
13	GO:0004708: MAP kinase kinase activity	6.32E-04
14	GO:0004714: transmembrane receptor protein tyrosine kinase activity	6.32E-04
15	GO:0016844: strictosidine synthase activity	8.99E-04
16	GO:0000166: nucleotide binding	9.65E-04
17	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	1.29E-03
18	GO:0030552: cAMP binding	1.50E-03
19	GO:0030553: cGMP binding	1.50E-03
20	GO:0005216: ion channel activity	1.85E-03
21	GO:0008168: methyltransferase activity	2.14E-03
22	GO:0005249: voltage-gated potassium channel activity	2.61E-03
23	GO:0030551: cyclic nucleotide binding	2.61E-03
24	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	3.75E-03
25	GO:0004721: phosphoprotein phosphatase activity	4.54E-03
26	GO:0008236: serine-type peptidase activity	4.70E-03
27	GO:0003697: single-stranded DNA binding	5.73E-03
28	GO:0004364: glutathione transferase activity	6.64E-03
29	GO:0005198: structural molecule activity	7.40E-03
30	GO:0015035: protein disulfide oxidoreductase activity	1.10E-02
31	GO:0016746: transferase activity, transferring acyl groups	1.10E-02
32	GO:0008026: ATP-dependent helicase activity	1.12E-02
33	GO:0019843: rRNA binding	1.26E-02
34	GO:0004252: serine-type endopeptidase activity	1.36E-02
35	GO:0044212: transcription regulatory region DNA binding	1.45E-02
36	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.51E-02
37	GO:0005524: ATP binding	1.75E-02
38	GO:0000287: magnesium ion binding	2.13E-02
39	GO:0004601: peroxidase activity	2.16E-02
40	GO:0016788: hydrolase activity, acting on ester bonds	2.19E-02
41	GO:0016301: kinase activity	2.53E-02
42	GO:0003735: structural constituent of ribosome	2.88E-02
43	GO:0009055: electron carrier activity	3.49E-02

Rank	GO Term	Adjusted P value
1	GO:0005736: DNA-directed RNA polymerase I complex	1.22E-05
2	GO:0033588: Elongator holoenzyme complex	1.83E-04
3	GO:0005945: 6-phosphofructokinase complex	3.18E-04
4	GO:0030125: clathrin vesicle coat	9.92E-04
5	GO:0005744: mitochondrial inner membrane presequence translocase complex	2.35E-03
6	GO:0048046: apoplast	2.52E-03
7	GO:0000932: P-body	4.06E-03
8	GO:0005773: vacuole	4.47E-03
9	GO:0005730: nucleolus	4.52E-03
10	GO:0005829: cytosol	8.33E-03
11	GO:0005834: heterotrimeric G-protein complex	9.87E-03
12	GO:0005840: ribosome	1.52E-02
13	GO:0009505: plant-type cell wall	1.81E-02
14	GO:0005789: endoplasmic reticulum membrane	2.21E-02
15	GO:0022625: cytosolic large ribosomal subunit	2.61E-02
16	GO:0005783: endoplasmic reticulum	2.72E-02
17	GO:0005743: mitochondrial inner membrane	3.15E-02
18	GO:0005887: integral component of plasma membrane	4.13E-02