co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G14000

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0048227: plasma membrane to endosome transport	0.00E+00
2	GO:0080180: 2-methylguanosine metabolic process	0.00E+00
3	GO:0046109: uridine biosynthetic process	0.00E+00
4	GO:2000541: positive regulation of protein geranylgeranylation	0.00E+00
5	GO:0051553: flavone biosynthetic process	0.00E+00
6	GO:0006182: cGMP biosynthetic process	0.00E+00
7	GO:0090480: purine nucleotide-sugar transmembrane transport	0.00E+00
8	GO:0006858: extracellular transport	0.00E+00
9	GO:0006952: defense response	2.98E-06
10	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	1.51E-04
11	GO:0044376: RNA polymerase II complex import to nucleus	1.88E-04
12	GO:0009968: negative regulation of signal transduction	1.88E-04
13	GO:0010266: response to vitamin B1	1.88E-04
14	GO:0043547: positive regulation of GTPase activity	1.88E-04
15	GO:0051245: negative regulation of cellular defense response	1.88E-04
16	GO:0006481: C-terminal protein methylation	1.88E-04
17	GO:1990022: RNA polymerase III complex localization to nucleus	1.88E-04
18	GO:0009620: response to fungus	1.89E-04
19	GO:0009627: systemic acquired resistance	3.06E-04
20	GO:0043069: negative regulation of programmed cell death	3.21E-04
21	GO:0042742: defense response to bacterium	3.55E-04
22	GO:0050832: defense response to fungus	4.04E-04
23	GO:0031349: positive regulation of defense response	4.24E-04
24	GO:0060151: peroxisome localization	4.24E-04
25	GO:0008535: respiratory chain complex IV assembly	4.24E-04
26	GO:0015914: phospholipid transport	4.24E-04
27	GO:0051645: Golgi localization	4.24E-04
28	GO:0070588: calcium ion transmembrane transport	6.12E-04
29	GO:0015031: protein transport	6.13E-04
30	GO:0007166: cell surface receptor signaling pathway	6.50E-04
31	GO:0006468: protein phosphorylation	6.89E-04
32	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	6.92E-04
33	GO:0051646: mitochondrion localization	6.92E-04
34	GO:0002230: positive regulation of defense response to virus by host	6.92E-04
35	GO:0090436: leaf pavement cell development	6.92E-04
36	GO:0015783: GDP-fucose transport	6.92E-04
37	GO:0009617: response to bacterium	6.94E-04
38	GO:0009052: pentose-phosphate shunt, non-oxidative branch	9.86E-04
39	GO:0006612: protein targeting to membrane	9.86E-04
40	GO:1902290: positive regulation of defense response to oomycetes	9.86E-04
41	GO:0000187: activation of MAPK activity	9.86E-04
42	GO:0019438: aromatic compound biosynthetic process	9.86E-04
43	GO:0034219: carbohydrate transmembrane transport	9.86E-04
44	GO:0002239: response to oomycetes	9.86E-04
45	GO:0009814: defense response, incompatible interaction	9.89E-04
46	GO:2000038: regulation of stomatal complex development	1.31E-03
47	GO:0010363: regulation of plant-type hypersensitive response	1.31E-03
48	GO:0048544: recognition of pollen	1.57E-03
49	GO:0061025: membrane fusion	1.57E-03
50	GO:0044550: secondary metabolite biosynthetic process	1.60E-03
51	GO:0009697: salicylic acid biosynthetic process	1.66E-03
52	GO:0030041: actin filament polymerization	1.66E-03
53	GO:0018344: protein geranylgeranylation	1.66E-03
54	GO:0009749: response to glucose	1.68E-03
55	GO:0055114: oxidation-reduction process	1.76E-03
56	GO:0007165: signal transduction	1.80E-03
57	GO:0007264: small GTPase mediated signal transduction	1.92E-03
58	GO:0030163: protein catabolic process	2.04E-03
59	GO:0042372: phylloquinone biosynthetic process	2.46E-03
60	GO:0009612: response to mechanical stimulus	2.46E-03
61	GO:0006694: steroid biosynthetic process	2.46E-03
62	GO:0098655: cation transmembrane transport	2.46E-03
63	GO:0010555: response to mannitol	2.46E-03
64	GO:2000037: regulation of stomatal complex patterning	2.46E-03
65	GO:2000067: regulation of root morphogenesis	2.46E-03
66	GO:0000911: cytokinesis by cell plate formation	2.46E-03
67	GO:0009751: response to salicylic acid	2.50E-03
68	GO:1900057: positive regulation of leaf senescence	2.90E-03
69	GO:0006400: tRNA modification	2.90E-03
70	GO:0010044: response to aluminum ion	2.90E-03
71	GO:0043090: amino acid import	2.90E-03
72	GO:0071446: cellular response to salicylic acid stimulus	2.90E-03
73	GO:0009787: regulation of abscisic acid-activated signaling pathway	3.36E-03
74	GO:0009813: flavonoid biosynthetic process	3.53E-03
75	GO:0043562: cellular response to nitrogen levels	3.84E-03
76	GO:2000031: regulation of salicylic acid mediated signaling pathway	3.84E-03
77	GO:0009699: phenylpropanoid biosynthetic process	3.84E-03
78	GO:0007186: G-protein coupled receptor signaling pathway	3.84E-03
79	GO:0006865: amino acid transport	4.07E-03
80	GO:0009821: alkaloid biosynthetic process	4.35E-03
81	GO:0015780: nucleotide-sugar transport	4.35E-03
82	GO:1900426: positive regulation of defense response to bacterium	4.87E-03
83	GO:0006887: exocytosis	5.05E-03
84	GO:0006032: chitin catabolic process	5.42E-03
85	GO:0051707: response to other organism	5.48E-03
86	GO:0015770: sucrose transport	5.99E-03
87	GO:0019684: photosynthesis, light reaction	5.99E-03
88	GO:0009750: response to fructose	5.99E-03
89	GO:0030148: sphingolipid biosynthetic process	5.99E-03
90	GO:0009737: response to abscisic acid	6.06E-03
91	GO:0012501: programmed cell death	6.58E-03
92	GO:0009846: pollen germination	6.88E-03
93	GO:0030048: actin filament-based movement	7.19E-03
94	GO:0010229: inflorescence development	7.19E-03
95	GO:0080167: response to karrikin	7.22E-03
96	GO:0048467: gynoecium development	7.82E-03
97	GO:0046777: protein autophosphorylation	7.87E-03
98	GO:0005985: sucrose metabolic process	8.47E-03
99	GO:0042343: indole glucosinolate metabolic process	8.47E-03
100	GO:0055085: transmembrane transport	8.77E-03
101	GO:0009626: plant-type hypersensitive response	9.31E-03
102	GO:0009863: salicylic acid mediated signaling pathway	9.83E-03
103	GO:0030150: protein import into mitochondrial matrix	9.83E-03
104	GO:0080147: root hair cell development	9.83E-03
105	GO:0016575: histone deacetylation	1.05E-02
106	GO:0006874: cellular calcium ion homeostasis	1.05E-02
107	GO:0032259: methylation	1.12E-02
108	GO:0003333: amino acid transmembrane transport	1.13E-02
109	GO:0016998: cell wall macromolecule catabolic process	1.13E-02
110	GO:0015992: proton transport	1.13E-02
111	GO:0098542: defense response to other organism	1.13E-02
112	GO:0048278: vesicle docking	1.13E-02
113	GO:0030433: ubiquitin-dependent ERAD pathway	1.20E-02
114	GO:0031348: negative regulation of defense response	1.20E-02
115	GO:0071456: cellular response to hypoxia	1.20E-02
116	GO:0006508: proteolysis	1.23E-02
117	GO:0010227: floral organ abscission	1.28E-02
118	GO:0006012: galactose metabolic process	1.28E-02
119	GO:0042127: regulation of cell proliferation	1.35E-02
120	GO:0009306: protein secretion	1.35E-02
121	GO:0010584: pollen exine formation	1.35E-02
122	GO:0045492: xylan biosynthetic process	1.35E-02
123	GO:0010118: stomatal movement	1.51E-02
124	GO:0010182: sugar mediated signaling pathway	1.60E-02
125	GO:0006623: protein targeting to vacuole	1.77E-02
126	GO:0002229: defense response to oomycetes	1.85E-02
127	GO:0016032: viral process	1.94E-02
128	GO:0010090: trichome morphogenesis	2.03E-02
129	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	2.04E-02
130	GO:0006470: protein dephosphorylation	2.09E-02
131	GO:0006904: vesicle docking involved in exocytosis	2.22E-02
132	GO:0009615: response to virus	2.41E-02
133	GO:0009816: defense response to bacterium, incompatible interaction	2.51E-02
134	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.51E-02
135	GO:0006906: vesicle fusion	2.61E-02
136	GO:0030244: cellulose biosynthetic process	2.91E-02
137	GO:0048767: root hair elongation	3.02E-02
138	GO:0007568: aging	3.23E-02
139	GO:0009867: jasmonic acid mediated signaling pathway	3.45E-02
140	GO:0006897: endocytosis	3.89E-02
141	GO:0009744: response to sucrose	4.13E-02
142	GO:0006886: intracellular protein transport	4.32E-02
143	GO:0008643: carbohydrate transport	4.36E-02
144	GO:0000165: MAPK cascade	4.73E-02
145	GO:0031347: regulation of defense response	4.73E-02
146	GO:0016042: lipid catabolic process	5.00E-02

Rank	GO Term	Adjusted P value
1	GO:0005092: GDP-dissociation inhibitor activity	0.00E+00
2	GO:0033759: flavone synthase activity	0.00E+00
3	GO:0050269: coniferyl-aldehyde dehydrogenase activity	0.00E+00
4	GO:0016301: kinase activity	9.00E-07
5	GO:0005093: Rab GDP-dissociation inhibitor activity	6.26E-06
6	GO:0004674: protein serine/threonine kinase activity	8.62E-06
7	GO:0017137: Rab GTPase binding	4.30E-05
8	GO:0004656: procollagen-proline 4-dioxygenase activity	8.84E-05
9	GO:0008909: isochorismate synthase activity	1.88E-04
10	GO:0004671: protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity	1.88E-04
11	GO:0015085: calcium ion transmembrane transporter activity	1.88E-04
12	GO:0005524: ATP binding	2.74E-04
13	GO:0005096: GTPase activator activity	4.01E-04
14	GO:0030742: GTP-dependent protein binding	4.24E-04
15	GO:0045140: inositol phosphoceramide synthase activity	4.24E-04
16	GO:0004566: beta-glucuronidase activity	4.24E-04
17	GO:0005388: calcium-transporting ATPase activity	4.86E-04
18	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	5.10E-04
19	GO:0004190: aspartic-type endopeptidase activity	6.12E-04
20	GO:0031683: G-protein beta/gamma-subunit complex binding	6.92E-04
21	GO:0004751: ribose-5-phosphate isomerase activity	6.92E-04
22	GO:0004383: guanylate cyclase activity	6.92E-04
23	GO:0005457: GDP-fucose transmembrane transporter activity	6.92E-04
24	GO:0001664: G-protein coupled receptor binding	6.92E-04
25	GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity	6.92E-04
26	GO:0031418: L-ascorbic acid binding	7.52E-04
27	GO:0004930: G-protein coupled receptor activity	1.31E-03
28	GO:0005506: iron ion binding	1.32E-03
29	GO:0004040: amidase activity	1.66E-03
30	GO:0045431: flavonol synthase activity	1.66E-03
31	GO:0004029: aldehyde dehydrogenase (NAD) activity	2.05E-03
32	GO:0004866: endopeptidase inhibitor activity	2.05E-03
33	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	2.09E-03
34	GO:0008506: sucrose:proton symporter activity	2.90E-03
35	GO:0030247: polysaccharide binding	3.04E-03
36	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	3.20E-03
37	GO:0052747: sinapyl alcohol dehydrogenase activity	3.36E-03
38	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	3.36E-03
39	GO:0004708: MAP kinase kinase activity	3.36E-03
40	GO:0004034: aldose 1-epimerase activity	3.36E-03
41	GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)	3.84E-03
42	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	4.28E-03
43	GO:0005509: calcium ion binding	4.36E-03
44	GO:0030955: potassium ion binding	4.87E-03
45	GO:0016844: strictosidine synthase activity	4.87E-03
46	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	4.87E-03
47	GO:0004743: pyruvate kinase activity	4.87E-03
48	GO:0004568: chitinase activity	5.42E-03
49	GO:0008171: O-methyltransferase activity	5.42E-03
50	GO:0005484: SNAP receptor activity	5.48E-03
51	GO:0045551: cinnamyl-alcohol dehydrogenase activity	6.58E-03
52	GO:0015266: protein channel activity	7.19E-03
53	GO:0005262: calcium channel activity	7.19E-03
54	GO:0003774: motor activity	7.82E-03
55	GO:0015171: amino acid transmembrane transporter activity	8.18E-03
56	GO:0005217: intracellular ligand-gated ion channel activity	8.47E-03
57	GO:0004970: ionotropic glutamate receptor activity	8.47E-03
58	GO:0030246: carbohydrate binding	9.58E-03
59	GO:0003954: NADH dehydrogenase activity	9.83E-03
60	GO:0004407: histone deacetylase activity	9.83E-03
61	GO:0003779: actin binding	1.02E-02
62	GO:0019825: oxygen binding	1.04E-02
63	GO:0004707: MAP kinase activity	1.13E-02
64	GO:0005516: calmodulin binding	1.14E-02
65	GO:0001085: RNA polymerase II transcription factor binding	1.60E-02
66	GO:0016853: isomerase activity	1.68E-02
67	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.70E-02
68	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	2.22E-02
69	GO:0009931: calcium-dependent protein serine/threonine kinase activity	2.61E-02
70	GO:0016491: oxidoreductase activity	2.67E-02
71	GO:0004683: calmodulin-dependent protein kinase activity	2.71E-02
72	GO:0004806: triglyceride lipase activity	2.71E-02
73	GO:0008168: methyltransferase activity	2.72E-02
74	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	3.23E-02
75	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	3.23E-02
76	GO:0008233: peptidase activity	3.44E-02
77	GO:0020037: heme binding	3.48E-02
78	GO:0000149: SNARE binding	3.67E-02
79	GO:0061630: ubiquitin protein ligase activity	3.68E-02
80	GO:0052689: carboxylic ester hydrolase activity	3.87E-02
81	GO:0015293: symporter activity	4.48E-02
82	GO:0004722: protein serine/threonine phosphatase activity	4.58E-02

Rank	GO Term	Adjusted P value
1	GO:0016021: integral component of membrane	2.23E-10
2	GO:0005886: plasma membrane	3.98E-06
3	GO:0005911: cell-cell junction	1.88E-04
4	GO:0031304: intrinsic component of mitochondrial inner membrane	4.24E-04
5	GO:0030658: transport vesicle membrane	9.86E-04
6	GO:0070062: extracellular exosome	9.86E-04
7	GO:0005968: Rab-protein geranylgeranyltransferase complex	9.86E-04
8	GO:0005802: trans-Golgi network	3.33E-03
9	GO:0031305: integral component of mitochondrial inner membrane	3.36E-03
10	GO:0005783: endoplasmic reticulum	3.71E-03
11	GO:0005887: integral component of plasma membrane	4.07E-03
12	GO:0005576: extracellular region	4.23E-03
13	GO:0030665: clathrin-coated vesicle membrane	4.87E-03
14	GO:0031902: late endosome membrane	5.05E-03
15	GO:0016459: myosin complex	5.42E-03
16	GO:0017119: Golgi transport complex	5.42E-03
17	GO:0005765: lysosomal membrane	5.99E-03
18	GO:0005789: endoplasmic reticulum membrane	1.05E-02
19	GO:0016020: membrane	1.21E-02
20	GO:0005744: mitochondrial inner membrane presequence translocase complex	1.35E-02
21	GO:0005768: endosome	1.51E-02
22	GO:0019898: extrinsic component of membrane	1.77E-02
23	GO:0009504: cell plate	1.77E-02
24	GO:0000145: exocyst	1.94E-02
25	GO:0005667: transcription factor complex	2.61E-02
26	GO:0000139: Golgi membrane	2.78E-02
27	GO:0000325: plant-type vacuole	3.23E-02
28	GO:0031201: SNARE complex	3.89E-02
29	GO:0005774: vacuolar membrane	4.18E-02
30	GO:0031966: mitochondrial membrane	4.85E-02