GO Enrichment Analysis of Co-expressed Genes with
AT1G13000
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000188: inactivation of MAPK activity | 0.00E+00 |
| 2 | GO:2001253: regulation of histone H3-K36 trimethylation | 0.00E+00 |
| 3 | GO:0002764: immune response-regulating signaling pathway | 0.00E+00 |
| 4 | GO:0009312: oligosaccharide biosynthetic process | 0.00E+00 |
| 5 | GO:0019481: L-alanine catabolic process, by transamination | 0.00E+00 |
| 6 | GO:0032497: detection of lipopolysaccharide | 0.00E+00 |
| 7 | GO:0010793: regulation of mRNA export from nucleus | 0.00E+00 |
| 8 | GO:0048867: stem cell fate determination | 0.00E+00 |
| 9 | GO:0006468: protein phosphorylation | 1.44E-06 |
| 10 | GO:0048544: recognition of pollen | 2.01E-06 |
| 11 | GO:0009626: plant-type hypersensitive response | 4.82E-06 |
| 12 | GO:0006875: cellular metal ion homeostasis | 9.31E-05 |
| 13 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 1.14E-04 |
| 14 | GO:0098702: adenine import across plasma membrane | 1.37E-04 |
| 15 | GO:0035266: meristem growth | 1.37E-04 |
| 16 | GO:0098710: guanine import across plasma membrane | 1.37E-04 |
| 17 | GO:0007292: female gamete generation | 1.37E-04 |
| 18 | GO:0048482: plant ovule morphogenesis | 1.37E-04 |
| 19 | GO:1902265: abscisic acid homeostasis | 1.37E-04 |
| 20 | GO:0035344: hypoxanthine transport | 1.37E-04 |
| 21 | GO:0043687: post-translational protein modification | 1.37E-04 |
| 22 | GO:0031338: regulation of vesicle fusion | 1.37E-04 |
| 23 | GO:0098721: uracil import across plasma membrane | 1.37E-04 |
| 24 | GO:0001666: response to hypoxia | 1.44E-04 |
| 25 | GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway | 1.73E-04 |
| 26 | GO:0008219: cell death | 2.09E-04 |
| 27 | GO:0009682: induced systemic resistance | 2.39E-04 |
| 28 | GO:0045087: innate immune response | 2.89E-04 |
| 29 | GO:0050684: regulation of mRNA processing | 3.16E-04 |
| 30 | GO:0051788: response to misfolded protein | 3.16E-04 |
| 31 | GO:0052542: defense response by callose deposition | 3.16E-04 |
| 32 | GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine | 3.16E-04 |
| 33 | GO:0006470: protein dephosphorylation | 3.27E-04 |
| 34 | GO:0090630: activation of GTPase activity | 5.20E-04 |
| 35 | GO:0046621: negative regulation of organ growth | 5.20E-04 |
| 36 | GO:0060968: regulation of gene silencing | 5.20E-04 |
| 37 | GO:0042344: indole glucosinolate catabolic process | 5.20E-04 |
| 38 | GO:0006954: inflammatory response | 5.20E-04 |
| 39 | GO:0032784: regulation of DNA-templated transcription, elongation | 5.20E-04 |
| 40 | GO:0016045: detection of bacterium | 5.20E-04 |
| 41 | GO:0010359: regulation of anion channel activity | 5.20E-04 |
| 42 | GO:0048194: Golgi vesicle budding | 7.44E-04 |
| 43 | GO:2001289: lipid X metabolic process | 7.44E-04 |
| 44 | GO:0070301: cellular response to hydrogen peroxide | 7.44E-04 |
| 45 | GO:0072334: UDP-galactose transmembrane transport | 7.44E-04 |
| 46 | GO:0015749: monosaccharide transport | 7.44E-04 |
| 47 | GO:0010104: regulation of ethylene-activated signaling pathway | 7.44E-04 |
| 48 | GO:0009399: nitrogen fixation | 7.44E-04 |
| 49 | GO:0046777: protein autophosphorylation | 8.06E-04 |
| 50 | GO:0046323: glucose import | 9.59E-04 |
| 51 | GO:0006542: glutamine biosynthetic process | 9.85E-04 |
| 52 | GO:0009687: abscisic acid metabolic process | 9.85E-04 |
| 53 | GO:0051123: RNA polymerase II transcriptional preinitiation complex assembly | 9.85E-04 |
| 54 | GO:0010225: response to UV-C | 1.25E-03 |
| 55 | GO:0048015: phosphatidylinositol-mediated signaling | 1.25E-03 |
| 56 | GO:0006090: pyruvate metabolic process | 1.25E-03 |
| 57 | GO:0018279: protein N-linked glycosylation via asparagine | 1.25E-03 |
| 58 | GO:0005513: detection of calcium ion | 1.25E-03 |
| 59 | GO:0097428: protein maturation by iron-sulfur cluster transfer | 1.25E-03 |
| 60 | GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly | 1.53E-03 |
| 61 | GO:0048827: phyllome development | 1.53E-03 |
| 62 | GO:0048232: male gamete generation | 1.53E-03 |
| 63 | GO:0043248: proteasome assembly | 1.53E-03 |
| 64 | GO:0048317: seed morphogenesis | 1.53E-03 |
| 65 | GO:0010337: regulation of salicylic acid metabolic process | 1.53E-03 |
| 66 | GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response | 1.83E-03 |
| 67 | GO:0043966: histone H3 acetylation | 1.83E-03 |
| 68 | GO:0009423: chorismate biosynthetic process | 1.83E-03 |
| 69 | GO:0009612: response to mechanical stimulus | 1.83E-03 |
| 70 | GO:0006694: steroid biosynthetic process | 1.83E-03 |
| 71 | GO:0048573: photoperiodism, flowering | 1.97E-03 |
| 72 | GO:0006955: immune response | 2.15E-03 |
| 73 | GO:0009617: response to bacterium | 2.26E-03 |
| 74 | GO:0009819: drought recovery | 2.49E-03 |
| 75 | GO:0006491: N-glycan processing | 2.49E-03 |
| 76 | GO:0010078: maintenance of root meristem identity | 2.49E-03 |
| 77 | GO:0032875: regulation of DNA endoreduplication | 2.49E-03 |
| 78 | GO:0009808: lignin metabolic process | 2.85E-03 |
| 79 | GO:0006303: double-strand break repair via nonhomologous end joining | 2.85E-03 |
| 80 | GO:0010093: specification of floral organ identity | 2.85E-03 |
| 81 | GO:2000031: regulation of salicylic acid mediated signaling pathway | 2.85E-03 |
| 82 | GO:0010204: defense response signaling pathway, resistance gene-independent | 2.85E-03 |
| 83 | GO:0009051: pentose-phosphate shunt, oxidative branch | 3.22E-03 |
| 84 | GO:0010112: regulation of systemic acquired resistance | 3.22E-03 |
| 85 | GO:0006897: endocytosis | 3.26E-03 |
| 86 | GO:0000723: telomere maintenance | 3.60E-03 |
| 87 | GO:0048829: root cap development | 4.00E-03 |
| 88 | GO:0007064: mitotic sister chromatid cohesion | 4.00E-03 |
| 89 | GO:0010015: root morphogenesis | 4.42E-03 |
| 90 | GO:0052544: defense response by callose deposition in cell wall | 4.42E-03 |
| 91 | GO:0072593: reactive oxygen species metabolic process | 4.42E-03 |
| 92 | GO:0009073: aromatic amino acid family biosynthetic process | 4.42E-03 |
| 93 | GO:0006352: DNA-templated transcription, initiation | 4.42E-03 |
| 94 | GO:0071365: cellular response to auxin stimulus | 4.85E-03 |
| 95 | GO:0010152: pollen maturation | 4.85E-03 |
| 96 | GO:0055046: microgametogenesis | 5.30E-03 |
| 97 | GO:0010102: lateral root morphogenesis | 5.30E-03 |
| 98 | GO:0006108: malate metabolic process | 5.30E-03 |
| 99 | GO:0009933: meristem structural organization | 5.76E-03 |
| 100 | GO:0007034: vacuolar transport | 5.76E-03 |
| 101 | GO:0048367: shoot system development | 5.80E-03 |
| 102 | GO:0090351: seedling development | 6.23E-03 |
| 103 | GO:0010030: positive regulation of seed germination | 6.23E-03 |
| 104 | GO:0046854: phosphatidylinositol phosphorylation | 6.23E-03 |
| 105 | GO:0009969: xyloglucan biosynthetic process | 6.23E-03 |
| 106 | GO:0080188: RNA-directed DNA methylation | 6.23E-03 |
| 107 | GO:0016569: covalent chromatin modification | 6.36E-03 |
| 108 | GO:0009408: response to heat | 6.75E-03 |
| 109 | GO:0010073: meristem maintenance | 7.73E-03 |
| 110 | GO:0006825: copper ion transport | 7.73E-03 |
| 111 | GO:0006874: cellular calcium ion homeostasis | 7.73E-03 |
| 112 | GO:0051260: protein homooligomerization | 8.26E-03 |
| 113 | GO:0031408: oxylipin biosynthetic process | 8.26E-03 |
| 114 | GO:0031348: negative regulation of defense response | 8.79E-03 |
| 115 | GO:0071456: cellular response to hypoxia | 8.79E-03 |
| 116 | GO:0035428: hexose transmembrane transport | 8.79E-03 |
| 117 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 8.79E-03 |
| 118 | GO:0030433: ubiquitin-dependent ERAD pathway | 8.79E-03 |
| 119 | GO:0009625: response to insect | 9.35E-03 |
| 120 | GO:0071215: cellular response to abscisic acid stimulus | 9.35E-03 |
| 121 | GO:0042631: cellular response to water deprivation | 1.11E-02 |
| 122 | GO:0006885: regulation of pH | 1.17E-02 |
| 123 | GO:0009611: response to wounding | 1.44E-02 |
| 124 | GO:0006310: DNA recombination | 1.55E-02 |
| 125 | GO:0019760: glucosinolate metabolic process | 1.55E-02 |
| 126 | GO:0051607: defense response to virus | 1.69E-02 |
| 127 | GO:0016126: sterol biosynthetic process | 1.76E-02 |
| 128 | GO:0046686: response to cadmium ion | 1.77E-02 |
| 129 | GO:0009651: response to salt stress | 1.88E-02 |
| 130 | GO:0009627: systemic acquired resistance | 1.90E-02 |
| 131 | GO:0042128: nitrate assimilation | 1.90E-02 |
| 132 | GO:0006950: response to stress | 1.98E-02 |
| 133 | GO:0009817: defense response to fungus, incompatible interaction | 2.12E-02 |
| 134 | GO:0048366: leaf development | 2.14E-02 |
| 135 | GO:0010311: lateral root formation | 2.20E-02 |
| 136 | GO:0006499: N-terminal protein myristoylation | 2.28E-02 |
| 137 | GO:0010119: regulation of stomatal movement | 2.36E-02 |
| 138 | GO:0016192: vesicle-mediated transport | 2.37E-02 |
| 139 | GO:0009867: jasmonic acid mediated signaling pathway | 2.51E-02 |
| 140 | GO:0006099: tricarboxylic acid cycle | 2.60E-02 |
| 141 | GO:0006886: intracellular protein transport | 2.78E-02 |
| 142 | GO:0051707: response to other organism | 3.01E-02 |
| 143 | GO:0009636: response to toxic substance | 3.27E-02 |
| 144 | GO:0009965: leaf morphogenesis | 3.27E-02 |
| 145 | GO:0031347: regulation of defense response | 3.45E-02 |
| 146 | GO:0016310: phosphorylation | 3.46E-02 |
| 147 | GO:0048364: root development | 3.47E-02 |
| 148 | GO:0009846: pollen germination | 3.54E-02 |
| 149 | GO:0006812: cation transport | 3.54E-02 |
| 150 | GO:0006486: protein glycosylation | 3.72E-02 |
| 151 | GO:0006813: potassium ion transport | 3.72E-02 |
| 152 | GO:0009736: cytokinin-activated signaling pathway | 3.72E-02 |
| 153 | GO:0010224: response to UV-B | 3.82E-02 |
| 154 | GO:0018105: peptidyl-serine phosphorylation | 4.88E-02 |
| 155 | GO:0009742: brassinosteroid mediated signaling pathway | 4.98E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0017017: MAP kinase tyrosine/serine/threonine phosphatase activity | 0.00E+00 |
| 2 | GO:0005548: phospholipid transporter activity | 0.00E+00 |
| 3 | GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity | 0.00E+00 |
| 4 | GO:0005358: high-affinity hydrogen:glucose symporter activity | 0.00E+00 |
| 5 | GO:0005524: ATP binding | 2.70E-09 |
| 6 | GO:0004674: protein serine/threonine kinase activity | 1.03E-07 |
| 7 | GO:0016301: kinase activity | 9.00E-07 |
| 8 | GO:0019829: cation-transporting ATPase activity | 3.53E-06 |
| 9 | GO:0019199: transmembrane receptor protein kinase activity | 1.55E-05 |
| 10 | GO:0030246: carbohydrate binding | 3.75E-05 |
| 11 | GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity | 1.37E-04 |
| 12 | GO:0009679: hexose:proton symporter activity | 1.37E-04 |
| 13 | GO:0016303: 1-phosphatidylinositol-3-kinase activity | 1.37E-04 |
| 14 | GO:0015208: guanine transmembrane transporter activity | 1.37E-04 |
| 15 | GO:0015294: solute:cation symporter activity | 1.37E-04 |
| 16 | GO:0001102: RNA polymerase II activating transcription factor binding | 1.37E-04 |
| 17 | GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity | 1.37E-04 |
| 18 | GO:0016274: protein-arginine N-methyltransferase activity | 1.37E-04 |
| 19 | GO:0015207: adenine transmembrane transporter activity | 1.37E-04 |
| 20 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 3.14E-04 |
| 21 | GO:0003849: 3-deoxy-7-phosphoheptulonate synthase activity | 3.16E-04 |
| 22 | GO:0047012: sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity | 3.16E-04 |
| 23 | GO:0047209: coniferyl-alcohol glucosyltransferase activity | 3.16E-04 |
| 24 | GO:0017025: TBP-class protein binding | 3.99E-04 |
| 25 | GO:0004725: protein tyrosine phosphatase activity | 4.45E-04 |
| 26 | GO:0004473: malate dehydrogenase (decarboxylating) (NADP+) activity | 5.20E-04 |
| 27 | GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity | 5.20E-04 |
| 28 | GO:0003955: NAD(P)H dehydrogenase (quinone) activity | 5.20E-04 |
| 29 | GO:0004383: guanylate cyclase activity | 5.20E-04 |
| 30 | GO:0001653: peptide receptor activity | 7.44E-04 |
| 31 | GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity | 7.44E-04 |
| 32 | GO:0016652: oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor | 9.85E-04 |
| 33 | GO:0004737: pyruvate decarboxylase activity | 9.85E-04 |
| 34 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 9.85E-04 |
| 35 | GO:0004471: malate dehydrogenase (decarboxylating) (NAD+) activity | 9.85E-04 |
| 36 | GO:0015210: uracil transmembrane transporter activity | 9.85E-04 |
| 37 | GO:0004470: malic enzyme activity | 9.85E-04 |
| 38 | GO:0004576: oligosaccharyl transferase activity | 9.85E-04 |
| 39 | GO:0004672: protein kinase activity | 1.20E-03 |
| 40 | GO:0004356: glutamate-ammonia ligase activity | 1.25E-03 |
| 41 | GO:0010294: abscisic acid glucosyltransferase activity | 1.25E-03 |
| 42 | GO:0005459: UDP-galactose transmembrane transporter activity | 1.25E-03 |
| 43 | GO:0015145: monosaccharide transmembrane transporter activity | 1.25E-03 |
| 44 | GO:0008948: oxaloacetate decarboxylase activity | 1.25E-03 |
| 45 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 1.25E-03 |
| 46 | GO:0017137: Rab GTPase binding | 1.25E-03 |
| 47 | GO:0015144: carbohydrate transmembrane transporter activity | 1.51E-03 |
| 48 | GO:0030976: thiamine pyrophosphate binding | 1.53E-03 |
| 49 | GO:0019137: thioglucosidase activity | 1.53E-03 |
| 50 | GO:0036402: proteasome-activating ATPase activity | 1.53E-03 |
| 51 | GO:0005351: sugar:proton symporter activity | 1.75E-03 |
| 52 | GO:0003950: NAD+ ADP-ribosyltransferase activity | 1.83E-03 |
| 53 | GO:0004012: phospholipid-translocating ATPase activity | 1.83E-03 |
| 54 | GO:0004620: phospholipase activity | 2.15E-03 |
| 55 | GO:0016831: carboxy-lyase activity | 2.15E-03 |
| 56 | GO:0042162: telomeric DNA binding | 2.15E-03 |
| 57 | GO:0005096: GTPase activator activity | 2.29E-03 |
| 58 | GO:0016887: ATPase activity | 2.53E-03 |
| 59 | GO:0005375: copper ion transmembrane transporter activity | 2.85E-03 |
| 60 | GO:0008422: beta-glucosidase activity | 3.00E-03 |
| 61 | GO:0008417: fucosyltransferase activity | 3.22E-03 |
| 62 | GO:0004003: ATP-dependent DNA helicase activity | 3.22E-03 |
| 63 | GO:0008138: protein tyrosine/serine/threonine phosphatase activity | 3.22E-03 |
| 64 | GO:0004713: protein tyrosine kinase activity | 4.00E-03 |
| 65 | GO:0047372: acylglycerol lipase activity | 4.42E-03 |
| 66 | GO:0031625: ubiquitin protein ligase binding | 5.26E-03 |
| 67 | GO:0005388: calcium-transporting ATPase activity | 5.30E-03 |
| 68 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 6.17E-03 |
| 69 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 6.17E-03 |
| 70 | GO:0051536: iron-sulfur cluster binding | 7.22E-03 |
| 71 | GO:0043130: ubiquitin binding | 7.22E-03 |
| 72 | GO:0043424: protein histidine kinase binding | 7.73E-03 |
| 73 | GO:0005451: monovalent cation:proton antiporter activity | 1.11E-02 |
| 74 | GO:0004402: histone acetyltransferase activity | 1.11E-02 |
| 75 | GO:0015299: solute:proton antiporter activity | 1.23E-02 |
| 76 | GO:0005355: glucose transmembrane transporter activity | 1.23E-02 |
| 77 | GO:0010181: FMN binding | 1.23E-02 |
| 78 | GO:0008194: UDP-glycosyltransferase activity | 1.31E-02 |
| 79 | GO:0015385: sodium:proton antiporter activity | 1.49E-02 |
| 80 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 1.49E-02 |
| 81 | GO:0003684: damaged DNA binding | 1.55E-02 |
| 82 | GO:0046982: protein heterodimerization activity | 1.78E-02 |
| 83 | GO:0000287: magnesium ion binding | 1.78E-02 |
| 84 | GO:0008375: acetylglucosaminyltransferase activity | 1.90E-02 |
| 85 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 1.90E-02 |
| 86 | GO:0004683: calmodulin-dependent protein kinase activity | 1.98E-02 |
| 87 | GO:0102483: scopolin beta-glucosidase activity | 1.98E-02 |
| 88 | GO:0030247: polysaccharide binding | 1.98E-02 |
| 89 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 1.99E-02 |
| 90 | GO:0004722: protein serine/threonine phosphatase activity | 2.96E-02 |
| 91 | GO:0005509: calcium ion binding | 3.07E-02 |
| 92 | GO:0005198: structural molecule activity | 3.27E-02 |
| 93 | GO:0051287: NAD binding | 3.45E-02 |
| 94 | GO:0016298: lipase activity | 3.82E-02 |
| 95 | GO:0003690: double-stranded DNA binding | 3.82E-02 |
| 96 | GO:0005215: transporter activity | 3.84E-02 |
| 97 | GO:0015171: amino acid transmembrane transporter activity | 4.00E-02 |
| 98 | GO:0045735: nutrient reservoir activity | 4.19E-02 |
| 99 | GO:0022857: transmembrane transporter activity | 4.58E-02 |
| 100 | GO:0016746: transferase activity, transferring acyl groups | 4.88E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005942: phosphatidylinositol 3-kinase complex | 0.00E+00 |
| 2 | GO:0005886: plasma membrane | 1.04E-12 |
| 3 | GO:0016021: integral component of membrane | 6.08E-06 |
| 4 | GO:0043564: Ku70:Ku80 complex | 1.37E-04 |
| 5 | GO:0045252: oxoglutarate dehydrogenase complex | 1.37E-04 |
| 6 | GO:0016020: membrane | 2.00E-04 |
| 7 | GO:0000124: SAGA complex | 3.16E-04 |
| 8 | GO:0008250: oligosaccharyltransferase complex | 1.25E-03 |
| 9 | GO:0031597: cytosolic proteasome complex | 1.83E-03 |
| 10 | GO:0000815: ESCRT III complex | 1.83E-03 |
| 11 | GO:0030173: integral component of Golgi membrane | 1.83E-03 |
| 12 | GO:0016363: nuclear matrix | 1.83E-03 |
| 13 | GO:0031595: nuclear proteasome complex | 2.15E-03 |
| 14 | GO:0030131: clathrin adaptor complex | 2.49E-03 |
| 15 | GO:0005669: transcription factor TFIID complex | 2.49E-03 |
| 16 | GO:0000784: nuclear chromosome, telomeric region | 2.85E-03 |
| 17 | GO:0008540: proteasome regulatory particle, base subcomplex | 3.60E-03 |
| 18 | GO:0030125: clathrin vesicle coat | 4.00E-03 |
| 19 | GO:0048471: perinuclear region of cytoplasm | 4.42E-03 |
| 20 | GO:0005789: endoplasmic reticulum membrane | 4.83E-03 |
| 21 | GO:0005794: Golgi apparatus | 5.27E-03 |
| 22 | GO:0005795: Golgi stack | 6.23E-03 |
| 23 | GO:0030176: integral component of endoplasmic reticulum membrane | 6.23E-03 |
| 24 | GO:0012505: endomembrane system | 6.56E-03 |
| 25 | GO:0005768: endosome | 7.74E-03 |
| 26 | GO:0005905: clathrin-coated pit | 8.26E-03 |
| 27 | GO:0005783: endoplasmic reticulum | 9.36E-03 |
| 28 | GO:0009506: plasmodesma | 1.48E-02 |
| 29 | GO:0032580: Golgi cisterna membrane | 1.55E-02 |
| 30 | GO:0005774: vacuolar membrane | 1.99E-02 |
| 31 | GO:0000786: nucleosome | 2.43E-02 |
| 32 | GO:0005802: trans-Golgi network | 2.54E-02 |
| 33 | GO:0043231: intracellular membrane-bounded organelle | 3.66E-02 |
| 34 | GO:0000502: proteasome complex | 3.72E-02 |