Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G12900

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0045176: apical protein localization0.00E+00
2GO:0006223: uracil salvage0.00E+00
3GO:0002184: cytoplasmic translational termination0.00E+00
4GO:0016553: base conversion or substitution editing0.00E+00
5GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate0.00E+00
6GO:0006780: uroporphyrinogen III biosynthetic process0.00E+00
7GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation0.00E+00
8GO:0033494: ferulate metabolic process0.00E+00
9GO:0061635: regulation of protein complex stability0.00E+00
10GO:0005996: monosaccharide metabolic process0.00E+00
11GO:0042493: response to drug0.00E+00
12GO:0070272: proton-transporting ATP synthase complex biogenesis0.00E+00
13GO:0042371: vitamin K biosynthetic process0.00E+00
14GO:0006399: tRNA metabolic process0.00E+00
15GO:0032544: plastid translation6.93E-20
16GO:0015979: photosynthesis4.51E-18
17GO:0006412: translation3.79E-16
18GO:0009735: response to cytokinin9.36E-14
19GO:0009773: photosynthetic electron transport in photosystem I5.09E-11
20GO:0042254: ribosome biogenesis1.09E-09
21GO:0009658: chloroplast organization1.32E-07
22GO:0010027: thylakoid membrane organization1.77E-07
23GO:0015995: chlorophyll biosynthetic process3.26E-07
24GO:0010196: nonphotochemical quenching6.86E-07
25GO:0006633: fatty acid biosynthetic process1.21E-05
26GO:0010207: photosystem II assembly2.28E-05
27GO:0008610: lipid biosynthetic process5.44E-05
28GO:0090391: granum assembly6.14E-05
29GO:0010206: photosystem II repair1.01E-04
30GO:0009409: response to cold1.36E-04
31GO:0042335: cuticle development1.46E-04
32GO:0015976: carbon utilization2.18E-04
33GO:2000122: negative regulation of stomatal complex development2.18E-04
34GO:0006546: glycine catabolic process2.18E-04
35GO:0006183: GTP biosynthetic process2.18E-04
36GO:0045727: positive regulation of translation2.18E-04
37GO:0010037: response to carbon dioxide2.18E-04
38GO:0010236: plastoquinone biosynthetic process3.29E-04
39GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway4.58E-04
40GO:0010190: cytochrome b6f complex assembly4.58E-04
41GO:0006636: unsaturated fatty acid biosynthetic process4.78E-04
42GO:0042372: phylloquinone biosynthetic process6.07E-04
43GO:1902458: positive regulation of stomatal opening6.60E-04
44GO:0034337: RNA folding6.60E-04
45GO:0071588: hydrogen peroxide mediated signaling pathway6.60E-04
46GO:0010729: positive regulation of hydrogen peroxide biosynthetic process6.60E-04
47GO:0060627: regulation of vesicle-mediated transport6.60E-04
48GO:0043489: RNA stabilization6.60E-04
49GO:1904966: positive regulation of vitamin E biosynthetic process6.60E-04
50GO:0010442: guard cell morphogenesis6.60E-04
51GO:0000481: maturation of 5S rRNA6.60E-04
52GO:1904964: positive regulation of phytol biosynthetic process6.60E-04
53GO:0042759: long-chain fatty acid biosynthetic process6.60E-04
54GO:0009772: photosynthetic electron transport in photosystem II7.76E-04
55GO:0045454: cell redox homeostasis8.44E-04
56GO:0009411: response to UV8.83E-04
57GO:0046620: regulation of organ growth9.63E-04
58GO:0009657: plastid organization1.17E-03
59GO:0042742: defense response to bacterium1.20E-03
60GO:0000413: protein peptidyl-prolyl isomerization1.20E-03
61GO:0006729: tetrahydrobiopterin biosynthetic process1.42E-03
62GO:1903426: regulation of reactive oxygen species biosynthetic process1.42E-03
63GO:0030388: fructose 1,6-bisphosphate metabolic process1.42E-03
64GO:0043255: regulation of carbohydrate biosynthetic process1.42E-03
65GO:0052541: plant-type cell wall cellulose metabolic process1.42E-03
66GO:0010541: acropetal auxin transport1.42E-03
67GO:1902326: positive regulation of chlorophyll biosynthetic process1.42E-03
68GO:0010205: photoinhibition1.66E-03
69GO:0043085: positive regulation of catalytic activity2.25E-03
70GO:0018119: peptidyl-cysteine S-nitrosylation2.25E-03
71GO:2001295: malonyl-CoA biosynthetic process2.35E-03
72GO:0006518: peptide metabolic process2.35E-03
73GO:0006000: fructose metabolic process2.35E-03
74GO:0071492: cellular response to UV-A2.35E-03
75GO:0010581: regulation of starch biosynthetic process2.35E-03
76GO:0010160: formation of animal organ boundary2.35E-03
77GO:0030036: actin cytoskeleton organization2.94E-03
78GO:0010540: basipetal auxin transport3.32E-03
79GO:0010143: cutin biosynthetic process3.32E-03
80GO:0006166: purine ribonucleoside salvage3.41E-03
81GO:0071484: cellular response to light intensity3.41E-03
82GO:0009650: UV protection3.41E-03
83GO:0051085: chaperone mediated protein folding requiring cofactor3.41E-03
84GO:0051639: actin filament network formation3.41E-03
85GO:0010731: protein glutathionylation3.41E-03
86GO:0006424: glutamyl-tRNA aminoacylation3.41E-03
87GO:1901332: negative regulation of lateral root development3.41E-03
88GO:0006241: CTP biosynthetic process3.41E-03
89GO:0043481: anthocyanin accumulation in tissues in response to UV light3.41E-03
90GO:0006168: adenine salvage3.41E-03
91GO:0051016: barbed-end actin filament capping3.41E-03
92GO:0006165: nucleoside diphosphate phosphorylation3.41E-03
93GO:0006986: response to unfolded protein3.41E-03
94GO:0055070: copper ion homeostasis3.41E-03
95GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis3.41E-03
96GO:2001141: regulation of RNA biosynthetic process3.41E-03
97GO:0006228: UTP biosynthetic process3.41E-03
98GO:0044206: UMP salvage4.60E-03
99GO:0006808: regulation of nitrogen utilization4.60E-03
100GO:0071486: cellular response to high light intensity4.60E-03
101GO:0051764: actin crosslink formation4.60E-03
102GO:0019464: glycine decarboxylation via glycine cleavage system4.60E-03
103GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway4.60E-03
104GO:0055114: oxidation-reduction process4.61E-03
105GO:0009637: response to blue light5.30E-03
106GO:0061077: chaperone-mediated protein folding5.61E-03
107GO:0031365: N-terminal protein amino acid modification5.92E-03
108GO:0043097: pyrimidine nucleoside salvage5.92E-03
109GO:0006461: protein complex assembly5.92E-03
110GO:0044209: AMP salvage5.92E-03
111GO:0032543: mitochondrial translation5.92E-03
112GO:0006564: L-serine biosynthetic process5.92E-03
113GO:0045038: protein import into chloroplast thylakoid membrane5.92E-03
114GO:0048359: mucilage metabolic process involved in seed coat development5.92E-03
115GO:0009306: protein secretion7.31E-03
116GO:0035435: phosphate ion transmembrane transport7.35E-03
117GO:0009926: auxin polar transport7.35E-03
118GO:0048827: phyllome development7.35E-03
119GO:0042549: photosystem II stabilization7.35E-03
120GO:0009913: epidermal cell differentiation7.35E-03
121GO:0060918: auxin transport7.35E-03
122GO:0010337: regulation of salicylic acid metabolic process7.35E-03
123GO:0006014: D-ribose metabolic process7.35E-03
124GO:0006206: pyrimidine nucleobase metabolic process7.35E-03
125GO:0032973: amino acid export7.35E-03
126GO:0010019: chloroplast-nucleus signaling pathway8.89E-03
127GO:1901259: chloroplast rRNA processing8.89E-03
128GO:0010555: response to mannitol8.89E-03
129GO:0009955: adaxial/abaxial pattern specification8.89E-03
130GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)8.89E-03
131GO:0017148: negative regulation of translation8.89E-03
132GO:0006694: steroid biosynthetic process8.89E-03
133GO:0010189: vitamin E biosynthetic process8.89E-03
134GO:0009854: oxidative photosynthetic carbon pathway8.89E-03
135GO:0009610: response to symbiotic fungus1.05E-02
136GO:0043090: amino acid import1.05E-02
137GO:0051693: actin filament capping1.05E-02
138GO:0006400: tRNA modification1.05E-02
139GO:0006353: DNA-templated transcription, termination1.23E-02
140GO:0032502: developmental process1.23E-02
141GO:0030091: protein repair1.23E-02
142GO:0048564: photosystem I assembly1.23E-02
143GO:0006605: protein targeting1.23E-02
144GO:0032508: DNA duplex unwinding1.23E-02
145GO:0009642: response to light intensity1.23E-02
146GO:2000070: regulation of response to water deprivation1.23E-02
147GO:0045010: actin nucleation1.23E-02
148GO:0010492: maintenance of shoot apical meristem identity1.23E-02
149GO:0042255: ribosome assembly1.23E-02
150GO:0017004: cytochrome complex assembly1.41E-02
151GO:0009808: lignin metabolic process1.41E-02
152GO:0009932: cell tip growth1.41E-02
153GO:0019430: removal of superoxide radicals1.41E-02
154GO:0006002: fructose 6-phosphate metabolic process1.41E-02
155GO:0071482: cellular response to light stimulus1.41E-02
156GO:0015996: chlorophyll catabolic process1.41E-02
157GO:0006526: arginine biosynthetic process1.41E-02
158GO:0007186: G-protein coupled receptor signaling pathway1.41E-02
159GO:0000902: cell morphogenesis1.61E-02
160GO:0015780: nucleotide-sugar transport1.61E-02
161GO:0080144: amino acid homeostasis1.61E-02
162GO:0009051: pentose-phosphate shunt, oxidative branch1.61E-02
163GO:0048507: meristem development1.61E-02
164GO:0006779: porphyrin-containing compound biosynthetic process1.81E-02
165GO:0010380: regulation of chlorophyll biosynthetic process1.81E-02
166GO:0006949: syncytium formation2.02E-02
167GO:0009870: defense response signaling pathway, resistance gene-dependent2.02E-02
168GO:0006032: chitin catabolic process2.02E-02
169GO:0006782: protoporphyrinogen IX biosynthetic process2.02E-02
170GO:0043069: negative regulation of programmed cell death2.02E-02
171GO:0048829: root cap development2.02E-02
172GO:0009817: defense response to fungus, incompatible interaction2.18E-02
173GO:0018298: protein-chromophore linkage2.18E-02
174GO:0006457: protein folding2.22E-02
175GO:0006415: translational termination2.24E-02
176GO:0019684: photosynthesis, light reaction2.24E-02
177GO:0000038: very long-chain fatty acid metabolic process2.24E-02
178GO:0009089: lysine biosynthetic process via diaminopimelate2.24E-02
179GO:0006352: DNA-templated transcription, initiation2.24E-02
180GO:0000272: polysaccharide catabolic process2.24E-02
181GO:0010218: response to far red light2.41E-02
182GO:0045037: protein import into chloroplast stroma2.47E-02
183GO:0008361: regulation of cell size2.47E-02
184GO:0016024: CDP-diacylglycerol biosynthetic process2.47E-02
185GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway2.52E-02
186GO:0010119: regulation of stomatal movement2.53E-02
187GO:0009734: auxin-activated signaling pathway2.53E-02
188GO:0009631: cold acclimation2.53E-02
189GO:0009793: embryo development ending in seed dormancy2.59E-02
190GO:0006094: gluconeogenesis2.70E-02
191GO:0009767: photosynthetic electron transport chain2.70E-02
192GO:0005986: sucrose biosynthetic process2.70E-02
193GO:0006006: glucose metabolic process2.70E-02
194GO:0010102: lateral root morphogenesis2.70E-02
195GO:0010229: inflorescence development2.70E-02
196GO:0034599: cellular response to oxidative stress2.90E-02
197GO:0019253: reductive pentose-phosphate cycle2.95E-02
198GO:0007015: actin filament organization2.95E-02
199GO:0010020: chloroplast fission2.95E-02
200GO:0010053: root epidermal cell differentiation3.20E-02
201GO:0046688: response to copper ion3.20E-02
202GO:0009825: multidimensional cell growth3.20E-02
203GO:0010167: response to nitrate3.20E-02
204GO:0005985: sucrose metabolic process3.20E-02
205GO:0045490: pectin catabolic process3.37E-02
206GO:0006071: glycerol metabolic process3.46E-02
207GO:0006833: water transport3.46E-02
208GO:0010025: wax biosynthetic process3.46E-02
209GO:0010114: response to red light3.57E-02
210GO:0009416: response to light stimulus3.72E-02
211GO:0019344: cysteine biosynthetic process3.72E-02
212GO:0009116: nucleoside metabolic process3.72E-02
213GO:0051017: actin filament bundle assembly3.72E-02
214GO:0000027: ribosomal large subunit assembly3.72E-02
215GO:0009768: photosynthesis, light harvesting in photosystem I3.99E-02
216GO:0010026: trichome differentiation3.99E-02
217GO:0031408: oxylipin biosynthetic process4.27E-02
218GO:0016114: terpenoid biosynthetic process4.27E-02
219GO:0003333: amino acid transmembrane transport4.27E-02
220GO:0016998: cell wall macromolecule catabolic process4.27E-02
221GO:0042538: hyperosmotic salinity response4.47E-02
222GO:0035428: hexose transmembrane transport4.55E-02
223GO:0006810: transport4.60E-02
224GO:0006813: potassium ion transport4.80E-02
225GO:0009809: lignin biosynthetic process4.80E-02
226GO:0006364: rRNA processing4.80E-02
227GO:0009831: plant-type cell wall modification involved in multidimensional cell growth4.84E-02
228GO:0008152: metabolic process4.87E-02
RankGO TermAdjusted P value
1GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity0.00E+00
2GO:0004852: uroporphyrinogen-III synthase activity0.00E+00
3GO:0033818: beta-ketoacyl-acyl-carrier-protein synthase III activity0.00E+00
4GO:0019146: arabinose-5-phosphate isomerase activity0.00E+00
5GO:0050614: delta24-sterol reductase activity0.00E+00
6GO:0009974: zeinoxanthin epsilon hydroxylase activity0.00E+00
7GO:0008887: glycerate kinase activity0.00E+00
8GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity0.00E+00
9GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity0.00E+00
10GO:0046028: electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity0.00E+00
11GO:0102550: 2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity0.00E+00
12GO:0046406: magnesium protoporphyrin IX methyltransferase activity0.00E+00
13GO:0047513: 1,2-alpha-L-fucosidase activity0.00E+00
14GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity0.00E+00
15GO:0050515: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity0.00E+00
16GO:0008756: o-succinylbenzoate-CoA ligase activity0.00E+00
17GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity0.00E+00
18GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity0.00E+00
19GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity0.00E+00
20GO:0019843: rRNA binding5.38E-28
21GO:0003735: structural constituent of ribosome1.40E-19
22GO:0003755: peptidyl-prolyl cis-trans isomerase activity1.65E-12
23GO:0005528: FK506 binding2.05E-11
24GO:0016851: magnesium chelatase activity1.25E-06
25GO:0051920: peroxiredoxin activity2.42E-05
26GO:0016209: antioxidant activity5.44E-05
27GO:0004659: prenyltransferase activity2.18E-04
28GO:0008266: poly(U) RNA binding3.54E-04
29GO:0045485: omega-6 fatty acid desaturase activity6.60E-04
30GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity6.60E-04
31GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity6.60E-04
32GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity6.60E-04
33GO:0047381: dodecanoyl-[acyl-carrier-protein] hydrolase activity6.60E-04
34GO:0009496: plastoquinol--plastocyanin reductase activity6.60E-04
35GO:0080132: fatty acid alpha-hydroxylase activity6.60E-04
36GO:0004163: diphosphomevalonate decarboxylase activity6.60E-04
37GO:0004033: aldo-keto reductase (NADP) activity9.63E-04
38GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water1.17E-03
39GO:0042389: omega-3 fatty acid desaturase activity1.42E-03
40GO:0010297: heteropolysaccharide binding1.42E-03
41GO:0004617: phosphoglycerate dehydrogenase activity1.42E-03
42GO:0003938: IMP dehydrogenase activity1.42E-03
43GO:0004047: aminomethyltransferase activity1.42E-03
44GO:0016630: protochlorophyllide reductase activity1.42E-03
45GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity1.42E-03
46GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity1.42E-03
47GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase1.42E-03
48GO:0008047: enzyme activator activity1.94E-03
49GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor2.35E-03
50GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity2.35E-03
51GO:0016296: palmitoyl-[acyl-carrier-protein] hydrolase activity2.35E-03
52GO:0016295: myristoyl-[acyl-carrier-protein] hydrolase activity2.35E-03
53GO:0045158: electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity2.35E-03
54GO:0017150: tRNA dihydrouridine synthase activity2.35E-03
55GO:0004075: biotin carboxylase activity2.35E-03
56GO:0050734: hydroxycinnamoyltransferase activity2.35E-03
57GO:0045174: glutathione dehydrogenase (ascorbate) activity2.35E-03
58GO:0030267: glyoxylate reductase (NADP) activity2.35E-03
59GO:0004148: dihydrolipoyl dehydrogenase activity2.35E-03
60GO:0016491: oxidoreductase activity2.58E-03
61GO:0004089: carbonate dehydratase activity2.94E-03
62GO:0031072: heat shock protein binding2.94E-03
63GO:0016168: chlorophyll binding2.99E-03
64GO:0008097: 5S rRNA binding3.41E-03
65GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity3.41E-03
66GO:0003999: adenine phosphoribosyltransferase activity3.41E-03
67GO:0004375: glycine dehydrogenase (decarboxylating) activity3.41E-03
68GO:0016149: translation release factor activity, codon specific3.41E-03
69GO:0004550: nucleoside diphosphate kinase activity3.41E-03
70GO:0043023: ribosomal large subunit binding3.41E-03
71GO:0008236: serine-type peptidase activity3.66E-03
72GO:0001053: plastid sigma factor activity4.60E-03
73GO:0004845: uracil phosphoribosyltransferase activity4.60E-03
74GO:0004345: glucose-6-phosphate dehydrogenase activity4.60E-03
75GO:0016836: hydro-lyase activity4.60E-03
76GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed4.60E-03
77GO:0016987: sigma factor activity4.60E-03
78GO:0010328: auxin influx transmembrane transporter activity4.60E-03
79GO:0052793: pectin acetylesterase activity4.60E-03
80GO:0043495: protein anchor4.60E-03
81GO:0016788: hydrolase activity, acting on ester bonds5.07E-03
82GO:0015079: potassium ion transmembrane transporter activity5.10E-03
83GO:0004040: amidase activity5.92E-03
84GO:0003989: acetyl-CoA carboxylase activity5.92E-03
85GO:0003959: NADPH dehydrogenase activity5.92E-03
86GO:0016773: phosphotransferase activity, alcohol group as acceptor5.92E-03
87GO:0022891: substrate-specific transmembrane transporter activity6.72E-03
88GO:0030570: pectate lyase activity6.72E-03
89GO:0005509: calcium ion binding6.97E-03
90GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity7.35E-03
91GO:0016208: AMP binding7.35E-03
92GO:0016688: L-ascorbate peroxidase activity7.35E-03
93GO:0004130: cytochrome-c peroxidase activity7.35E-03
94GO:0004366: glycerol-3-phosphate O-acyltransferase activity7.35E-03
95GO:0052689: carboxylic ester hydrolase activity8.53E-03
96GO:0004849: uridine kinase activity8.89E-03
97GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity8.89E-03
98GO:0033743: peptide-methionine (R)-S-oxide reductase activity8.89E-03
99GO:0015631: tubulin binding8.89E-03
100GO:0004747: ribokinase activity8.89E-03
101GO:0004791: thioredoxin-disulfide reductase activity9.98E-03
102GO:0050662: coenzyme binding9.98E-03
103GO:0016831: carboxy-lyase activity1.05E-02
104GO:0008235: metalloexopeptidase activity1.05E-02
105GO:0019899: enzyme binding1.05E-02
106GO:0004620: phospholipase activity1.05E-02
107GO:0008865: fructokinase activity1.23E-02
108GO:0052747: sinapyl alcohol dehydrogenase activity1.23E-02
109GO:0051015: actin filament binding1.31E-02
110GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor1.31E-02
111GO:0016722: oxidoreductase activity, oxidizing metal ions1.48E-02
112GO:0003747: translation release factor activity1.61E-02
113GO:0008889: glycerophosphodiester phosphodiesterase activity1.61E-02
114GO:0051082: unfolded protein binding1.69E-02
115GO:0047617: acyl-CoA hydrolase activity1.81E-02
116GO:0004568: chitinase activity2.02E-02
117GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity2.18E-02
118GO:0015386: potassium:proton antiporter activity2.24E-02
119GO:0004177: aminopeptidase activity2.24E-02
120GO:0004222: metalloendopeptidase activity2.41E-02
121GO:0008378: galactosyltransferase activity2.47E-02
122GO:0045551: cinnamyl-alcohol dehydrogenase activity2.47E-02
123GO:0004252: serine-type endopeptidase activity2.56E-02
124GO:0004022: alcohol dehydrogenase (NAD) activity2.70E-02
125GO:0015114: phosphate ion transmembrane transporter activity2.70E-02
126GO:0004565: beta-galactosidase activity2.70E-02
127GO:0010329: auxin efflux transmembrane transporter activity2.70E-02
128GO:0004364: glutathione transferase activity3.43E-02
129GO:0031409: pigment binding3.46E-02
130GO:0102336: 3-oxo-arachidoyl-CoA synthase activity3.46E-02
131GO:0102337: 3-oxo-cerotoyl-CoA synthase activity3.46E-02
132GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity3.46E-02
133GO:0051537: 2 iron, 2 sulfur cluster binding3.86E-02
134GO:0051087: chaperone binding3.99E-02
135GO:0008324: cation transmembrane transporter activity3.99E-02
136GO:0003723: RNA binding4.13E-02
137GO:0019706: protein-cysteine S-palmitoyltransferase activity4.27E-02
138GO:0004176: ATP-dependent peptidase activity4.27E-02
139GO:0004707: MAP kinase activity4.27E-02
140GO:0051287: NAD binding4.32E-02
141GO:0042626: ATPase activity, coupled to transmembrane movement of substances4.52E-02
142GO:0042802: identical protein binding4.52E-02
143GO:0016787: hydrolase activity4.62E-02
144GO:0003729: mRNA binding4.72E-02
RankGO TermAdjusted P value
1GO:0044391: ribosomal subunit0.00E+00
2GO:0009515: granal stacked thylakoid0.00E+00
3GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex0.00E+00
4GO:0009507: chloroplast1.26E-100
5GO:0009570: chloroplast stroma7.20E-75
6GO:0009941: chloroplast envelope2.43E-66
7GO:0009535: chloroplast thylakoid membrane2.54E-56
8GO:0009579: thylakoid6.82E-50
9GO:0009543: chloroplast thylakoid lumen1.87E-36
10GO:0009534: chloroplast thylakoid4.16E-34
11GO:0031977: thylakoid lumen2.50E-26
12GO:0005840: ribosome2.09E-20
13GO:0009654: photosystem II oxygen evolving complex5.21E-13
14GO:0030095: chloroplast photosystem II2.87E-10
15GO:0019898: extrinsic component of membrane1.02E-09
16GO:0010319: stromule1.14E-07
17GO:0048046: apoplast2.04E-07
18GO:0010007: magnesium chelatase complex2.66E-07
19GO:0016020: membrane3.53E-07
20GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)3.19E-06
21GO:0000311: plastid large ribosomal subunit1.32E-05
22GO:0031969: chloroplast membrane2.44E-05
23GO:0009533: chloroplast stromal thylakoid3.74E-05
24GO:0042651: thylakoid membrane5.51E-05
25GO:0015934: large ribosomal subunit1.28E-04
26GO:0009523: photosystem II2.16E-04
27GO:0010287: plastoglobule2.49E-04
28GO:0009505: plant-type cell wall3.14E-04
29GO:0000312: plastid small ribosomal subunit3.54E-04
30GO:0009547: plastid ribosome6.60E-04
31GO:0009706: chloroplast inner membrane8.61E-04
32GO:0005618: cell wall1.11E-03
33GO:0008290: F-actin capping protein complex1.42E-03
34GO:0000427: plastid-encoded plastid RNA polymerase complex1.42E-03
35GO:0042170: plastid membrane1.42E-03
36GO:0030093: chloroplast photosystem I1.42E-03
37GO:0009536: plastid2.12E-03
38GO:0005884: actin filament2.25E-03
39GO:0009528: plastid inner membrane2.35E-03
40GO:0009295: nucleoid2.39E-03
41GO:0005960: glycine cleavage complex3.41E-03
42GO:0032432: actin filament bundle3.41E-03
43GO:0046658: anchored component of plasma membrane3.72E-03
44GO:0022626: cytosolic ribosome4.28E-03
45GO:0031225: anchored component of membrane4.56E-03
46GO:0009527: plastid outer membrane4.60E-03
47GO:0015935: small ribosomal subunit5.61E-03
48GO:0009532: plastid stroma5.61E-03
49GO:0055035: plastid thylakoid membrane5.92E-03
50GO:0009512: cytochrome b6f complex5.92E-03
51GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1)7.35E-03
52GO:0031209: SCAR complex7.35E-03
53GO:0009539: photosystem II reaction center1.41E-02
54GO:0005763: mitochondrial small ribosomal subunit1.61E-02
55GO:0005874: microtubule2.28E-02
56GO:0032040: small-subunit processome2.47E-02
57GO:0009508: plastid chromosome2.70E-02
58GO:0030659: cytoplasmic vesicle membrane2.95E-02
59GO:0030076: light-harvesting complex3.20E-02
60GO:0005777: peroxisome4.66E-02
61GO:0022627: cytosolic small ribosomal subunit4.75E-02
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Gene type



Gene DE type