GO Enrichment Analysis of Co-expressed Genes with
AT1G12500
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0007638: mechanosensory behavior | 0.00E+00 |
| 2 | GO:0015739: sialic acid transport | 0.00E+00 |
| 3 | GO:0016120: carotene biosynthetic process | 4.30E-05 |
| 4 | GO:0006633: fatty acid biosynthetic process | 5.52E-05 |
| 5 | GO:0046520: sphingoid biosynthetic process | 1.88E-04 |
| 6 | GO:0010442: guard cell morphogenesis | 1.88E-04 |
| 7 | GO:0042371: vitamin K biosynthetic process | 1.88E-04 |
| 8 | GO:1902458: positive regulation of stomatal opening | 1.88E-04 |
| 9 | GO:0060627: regulation of vesicle-mediated transport | 1.88E-04 |
| 10 | GO:0016126: sterol biosynthetic process | 2.64E-04 |
| 11 | GO:0010115: regulation of abscisic acid biosynthetic process | 4.24E-04 |
| 12 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 4.24E-04 |
| 13 | GO:0052541: plant-type cell wall cellulose metabolic process | 4.24E-04 |
| 14 | GO:0009725: response to hormone | 4.86E-04 |
| 15 | GO:0006636: unsaturated fatty acid biosynthetic process | 6.80E-04 |
| 16 | GO:0006833: water transport | 6.80E-04 |
| 17 | GO:2001295: malonyl-CoA biosynthetic process | 6.92E-04 |
| 18 | GO:0055114: oxidation-reduction process | 7.94E-04 |
| 19 | GO:0042538: hyperosmotic salinity response | 9.33E-04 |
| 20 | GO:0051016: barbed-end actin filament capping | 9.86E-04 |
| 21 | GO:0046739: transport of virus in multicellular host | 9.86E-04 |
| 22 | GO:0007231: osmosensory signaling pathway | 9.86E-04 |
| 23 | GO:2000122: negative regulation of stomatal complex development | 1.31E-03 |
| 24 | GO:0033500: carbohydrate homeostasis | 1.31E-03 |
| 25 | GO:0010037: response to carbon dioxide | 1.31E-03 |
| 26 | GO:0015976: carbon utilization | 1.31E-03 |
| 27 | GO:0009765: photosynthesis, light harvesting | 1.31E-03 |
| 28 | GO:0006183: GTP biosynthetic process | 1.31E-03 |
| 29 | GO:0042335: cuticle development | 1.36E-03 |
| 30 | GO:0034220: ion transmembrane transport | 1.36E-03 |
| 31 | GO:0010182: sugar mediated signaling pathway | 1.46E-03 |
| 32 | GO:0006564: L-serine biosynthetic process | 1.66E-03 |
| 33 | GO:0045038: protein import into chloroplast thylakoid membrane | 1.66E-03 |
| 34 | GO:0016123: xanthophyll biosynthetic process | 1.66E-03 |
| 35 | GO:0016132: brassinosteroid biosynthetic process | 1.80E-03 |
| 36 | GO:0010583: response to cyclopentenone | 1.92E-03 |
| 37 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 2.05E-03 |
| 38 | GO:0006596: polyamine biosynthetic process | 2.05E-03 |
| 39 | GO:0006561: proline biosynthetic process | 2.05E-03 |
| 40 | GO:0048759: xylem vessel member cell differentiation | 2.05E-03 |
| 41 | GO:0010405: arabinogalactan protein metabolic process | 2.05E-03 |
| 42 | GO:1901259: chloroplast rRNA processing | 2.46E-03 |
| 43 | GO:0042372: phylloquinone biosynthetic process | 2.46E-03 |
| 44 | GO:0006694: steroid biosynthetic process | 2.46E-03 |
| 45 | GO:0009955: adaxial/abaxial pattern specification | 2.46E-03 |
| 46 | GO:0006401: RNA catabolic process | 2.90E-03 |
| 47 | GO:0051693: actin filament capping | 2.90E-03 |
| 48 | GO:0030497: fatty acid elongation | 2.90E-03 |
| 49 | GO:0010411: xyloglucan metabolic process | 3.04E-03 |
| 50 | GO:0042255: ribosome assembly | 3.36E-03 |
| 51 | GO:2000070: regulation of response to water deprivation | 3.36E-03 |
| 52 | GO:0010497: plasmodesmata-mediated intercellular transport | 3.84E-03 |
| 53 | GO:0032544: plastid translation | 3.84E-03 |
| 54 | GO:0009808: lignin metabolic process | 3.84E-03 |
| 55 | GO:0009932: cell tip growth | 3.84E-03 |
| 56 | GO:0015996: chlorophyll catabolic process | 3.84E-03 |
| 57 | GO:0007186: G-protein coupled receptor signaling pathway | 3.84E-03 |
| 58 | GO:0090305: nucleic acid phosphodiester bond hydrolysis | 4.35E-03 |
| 59 | GO:0000902: cell morphogenesis | 4.35E-03 |
| 60 | GO:0015780: nucleotide-sugar transport | 4.35E-03 |
| 61 | GO:0009051: pentose-phosphate shunt, oxidative branch | 4.35E-03 |
| 62 | GO:0009414: response to water deprivation | 4.81E-03 |
| 63 | GO:0010205: photoinhibition | 4.87E-03 |
| 64 | GO:0009638: phototropism | 4.87E-03 |
| 65 | GO:0071555: cell wall organization | 5.02E-03 |
| 66 | GO:0009826: unidimensional cell growth | 5.24E-03 |
| 67 | GO:0009870: defense response signaling pathway, resistance gene-dependent | 5.42E-03 |
| 68 | GO:0009688: abscisic acid biosynthetic process | 5.42E-03 |
| 69 | GO:0043069: negative regulation of programmed cell death | 5.42E-03 |
| 70 | GO:0009744: response to sucrose | 5.48E-03 |
| 71 | GO:0009658: chloroplast organization | 5.50E-03 |
| 72 | GO:0042546: cell wall biogenesis | 5.70E-03 |
| 73 | GO:0019684: photosynthesis, light reaction | 5.99E-03 |
| 74 | GO:0009089: lysine biosynthetic process via diaminopimelate | 5.99E-03 |
| 75 | GO:1903507: negative regulation of nucleic acid-templated transcription | 5.99E-03 |
| 76 | GO:0009750: response to fructose | 5.99E-03 |
| 77 | GO:0000038: very long-chain fatty acid metabolic process | 5.99E-03 |
| 78 | GO:0006816: calcium ion transport | 5.99E-03 |
| 79 | GO:0045037: protein import into chloroplast stroma | 6.58E-03 |
| 80 | GO:0006006: glucose metabolic process | 7.19E-03 |
| 81 | GO:0030036: actin cytoskeleton organization | 7.19E-03 |
| 82 | GO:0010207: photosystem II assembly | 7.82E-03 |
| 83 | GO:0007015: actin filament organization | 7.82E-03 |
| 84 | GO:0006857: oligopeptide transport | 7.91E-03 |
| 85 | GO:0070588: calcium ion transmembrane transport | 8.47E-03 |
| 86 | GO:0009825: multidimensional cell growth | 8.47E-03 |
| 87 | GO:0010025: wax biosynthetic process | 9.14E-03 |
| 88 | GO:0009833: plant-type primary cell wall biogenesis | 9.14E-03 |
| 89 | GO:0006071: glycerol metabolic process | 9.14E-03 |
| 90 | GO:0005992: trehalose biosynthetic process | 9.83E-03 |
| 91 | GO:0000027: ribosomal large subunit assembly | 9.83E-03 |
| 92 | GO:0007017: microtubule-based process | 1.05E-02 |
| 93 | GO:0010026: trichome differentiation | 1.05E-02 |
| 94 | GO:0031408: oxylipin biosynthetic process | 1.13E-02 |
| 95 | GO:0061077: chaperone-mediated protein folding | 1.13E-02 |
| 96 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 1.20E-02 |
| 97 | GO:0006284: base-excision repair | 1.35E-02 |
| 98 | GO:0019722: calcium-mediated signaling | 1.35E-02 |
| 99 | GO:0016117: carotenoid biosynthetic process | 1.43E-02 |
| 100 | GO:0010087: phloem or xylem histogenesis | 1.51E-02 |
| 101 | GO:0007165: signal transduction | 1.79E-02 |
| 102 | GO:0071554: cell wall organization or biogenesis | 1.85E-02 |
| 103 | GO:0032502: developmental process | 1.94E-02 |
| 104 | GO:1901657: glycosyl compound metabolic process | 2.03E-02 |
| 105 | GO:0007267: cell-cell signaling | 2.22E-02 |
| 106 | GO:0010027: thylakoid membrane organization | 2.41E-02 |
| 107 | GO:0009416: response to light stimulus | 2.45E-02 |
| 108 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 2.51E-02 |
| 109 | GO:0042128: nitrate assimilation | 2.61E-02 |
| 110 | GO:0009409: response to cold | 2.78E-02 |
| 111 | GO:0016311: dephosphorylation | 2.81E-02 |
| 112 | GO:0042254: ribosome biogenesis | 2.88E-02 |
| 113 | GO:0030244: cellulose biosynthetic process | 2.91E-02 |
| 114 | GO:0018298: protein-chromophore linkage | 2.91E-02 |
| 115 | GO:0009832: plant-type cell wall biogenesis | 3.02E-02 |
| 116 | GO:0000160: phosphorelay signal transduction system | 3.02E-02 |
| 117 | GO:0009407: toxin catabolic process | 3.12E-02 |
| 118 | GO:0009834: plant-type secondary cell wall biogenesis | 3.12E-02 |
| 119 | GO:0010119: regulation of stomatal movement | 3.23E-02 |
| 120 | GO:0005975: carbohydrate metabolic process | 3.28E-02 |
| 121 | GO:0055085: transmembrane transport | 3.30E-02 |
| 122 | GO:0009867: jasmonic acid mediated signaling pathway | 3.45E-02 |
| 123 | GO:0006631: fatty acid metabolic process | 3.89E-02 |
| 124 | GO:0009640: photomorphogenesis | 4.13E-02 |
| 125 | GO:0009926: auxin polar transport | 4.13E-02 |
| 126 | GO:0008643: carbohydrate transport | 4.36E-02 |
| 127 | GO:0009644: response to high light intensity | 4.36E-02 |
| 128 | GO:0009636: response to toxic substance | 4.48E-02 |
| 129 | GO:0006869: lipid transport | 4.58E-02 |
| 130 | GO:0031347: regulation of defense response | 4.73E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010487: thermospermine synthase activity | 0.00E+00 |
| 2 | GO:0045435: lycopene epsilon cyclase activity | 0.00E+00 |
| 3 | GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity | 0.00E+00 |
| 4 | GO:0050613: delta14-sterol reductase activity | 0.00E+00 |
| 5 | GO:0015136: sialic acid transmembrane transporter activity | 0.00E+00 |
| 6 | GO:0090471: 9,15,9'-tri-cis-zeta-carotene isomerase activity | 0.00E+00 |
| 7 | GO:0008756: o-succinylbenzoate-CoA ligase activity | 0.00E+00 |
| 8 | GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity | 0.00E+00 |
| 9 | GO:0019146: arabinose-5-phosphate isomerase activity | 0.00E+00 |
| 10 | GO:0050614: delta24-sterol reductase activity | 0.00E+00 |
| 11 | GO:0005456: CMP-N-acetylneuraminate transmembrane transporter activity | 0.00E+00 |
| 12 | GO:0008859: exoribonuclease II activity | 0.00E+00 |
| 13 | GO:0010301: xanthoxin dehydrogenase activity | 0.00E+00 |
| 14 | GO:0019843: rRNA binding | 3.29E-05 |
| 15 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 1.88E-04 |
| 16 | GO:0016768: spermine synthase activity | 1.88E-04 |
| 17 | GO:0004328: formamidase activity | 1.88E-04 |
| 18 | GO:0000248: C-5 sterol desaturase activity | 1.88E-04 |
| 19 | GO:0000170: sphingosine hydroxylase activity | 1.88E-04 |
| 20 | GO:0080132: fatty acid alpha-hydroxylase activity | 1.88E-04 |
| 21 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 4.24E-04 |
| 22 | GO:0042389: omega-3 fatty acid desaturase activity | 4.24E-04 |
| 23 | GO:0004617: phosphoglycerate dehydrogenase activity | 4.24E-04 |
| 24 | GO:0003938: IMP dehydrogenase activity | 4.24E-04 |
| 25 | GO:0042284: sphingolipid delta-4 desaturase activity | 4.24E-04 |
| 26 | GO:0004075: biotin carboxylase activity | 6.92E-04 |
| 27 | GO:0005528: FK506 binding | 7.52E-04 |
| 28 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 9.86E-04 |
| 29 | GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 9.86E-04 |
| 30 | GO:0001872: (1->3)-beta-D-glucan binding | 9.86E-04 |
| 31 | GO:0004506: squalene monooxygenase activity | 1.31E-03 |
| 32 | GO:0004345: glucose-6-phosphate dehydrogenase activity | 1.31E-03 |
| 33 | GO:0052793: pectin acetylesterase activity | 1.31E-03 |
| 34 | GO:0003989: acetyl-CoA carboxylase activity | 1.66E-03 |
| 35 | GO:0008725: DNA-3-methyladenine glycosylase activity | 1.66E-03 |
| 36 | GO:0009922: fatty acid elongase activity | 1.66E-03 |
| 37 | GO:0004872: receptor activity | 1.68E-03 |
| 38 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 1.80E-03 |
| 39 | GO:0004871: signal transducer activity | 1.99E-03 |
| 40 | GO:0016208: AMP binding | 2.05E-03 |
| 41 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 2.05E-03 |
| 42 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 2.37E-03 |
| 43 | GO:0015250: water channel activity | 2.58E-03 |
| 44 | GO:0005338: nucleotide-sugar transmembrane transporter activity | 2.90E-03 |
| 45 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 3.04E-03 |
| 46 | GO:0008889: glycerophosphodiester phosphodiesterase activity | 4.35E-03 |
| 47 | GO:0004805: trehalose-phosphatase activity | 5.42E-03 |
| 48 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 6.39E-03 |
| 49 | GO:0008081: phosphoric diester hydrolase activity | 7.19E-03 |
| 50 | GO:0004022: alcohol dehydrogenase (NAD) activity | 7.19E-03 |
| 51 | GO:0004089: carbonate dehydratase activity | 7.19E-03 |
| 52 | GO:0005262: calcium channel activity | 7.19E-03 |
| 53 | GO:0000175: 3'-5'-exoribonuclease activity | 7.19E-03 |
| 54 | GO:0004565: beta-galactosidase activity | 7.19E-03 |
| 55 | GO:0003690: double-stranded DNA binding | 7.64E-03 |
| 56 | GO:0016491: oxidoreductase activity | 8.11E-03 |
| 57 | GO:0008146: sulfotransferase activity | 8.47E-03 |
| 58 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 9.14E-03 |
| 59 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 9.14E-03 |
| 60 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 9.14E-03 |
| 61 | GO:0004650: polygalacturonase activity | 9.60E-03 |
| 62 | GO:0003714: transcription corepressor activity | 9.83E-03 |
| 63 | GO:0004540: ribonuclease activity | 1.13E-02 |
| 64 | GO:0030570: pectate lyase activity | 1.28E-02 |
| 65 | GO:0016760: cellulose synthase (UDP-forming) activity | 1.28E-02 |
| 66 | GO:0022891: substrate-specific transmembrane transporter activity | 1.28E-02 |
| 67 | GO:0003727: single-stranded RNA binding | 1.35E-02 |
| 68 | GO:0004518: nuclease activity | 1.94E-02 |
| 69 | GO:0000156: phosphorelay response regulator activity | 2.03E-02 |
| 70 | GO:0051015: actin filament binding | 2.03E-02 |
| 71 | GO:0016759: cellulose synthase activity | 2.13E-02 |
| 72 | GO:0005200: structural constituent of cytoskeleton | 2.22E-02 |
| 73 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 2.22E-02 |
| 74 | GO:0016597: amino acid binding | 2.31E-02 |
| 75 | GO:0016413: O-acetyltransferase activity | 2.31E-02 |
| 76 | GO:0042802: identical protein binding | 2.32E-02 |
| 77 | GO:0016168: chlorophyll binding | 2.51E-02 |
| 78 | GO:0030247: polysaccharide binding | 2.71E-02 |
| 79 | GO:0102483: scopolin beta-glucosidase activity | 2.71E-02 |
| 80 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 3.23E-02 |
| 81 | GO:0050660: flavin adenine dinucleotide binding | 3.27E-02 |
| 82 | GO:0003993: acid phosphatase activity | 3.56E-02 |
| 83 | GO:0008422: beta-glucosidase activity | 3.67E-02 |
| 84 | GO:0050661: NADP binding | 3.78E-02 |
| 85 | GO:0052689: carboxylic ester hydrolase activity | 3.87E-02 |
| 86 | GO:0004364: glutathione transferase activity | 4.01E-02 |
| 87 | GO:0004185: serine-type carboxypeptidase activity | 4.13E-02 |
| 88 | GO:0035091: phosphatidylinositol binding | 4.36E-02 |
| 89 | GO:0015293: symporter activity | 4.48E-02 |
| 90 | GO:0051287: NAD binding | 4.73E-02 |
| 91 | GO:0003735: structural constituent of ribosome | 4.84E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0031225: anchored component of membrane | 4.20E-06 |
| 2 | GO:0046658: anchored component of plasma membrane | 1.21E-05 |
| 3 | GO:0009507: chloroplast | 3.08E-05 |
| 4 | GO:0031969: chloroplast membrane | 2.60E-04 |
| 5 | GO:0042170: plastid membrane | 4.24E-04 |
| 6 | GO:0008290: F-actin capping protein complex | 4.24E-04 |
| 7 | GO:0009528: plastid inner membrane | 6.92E-04 |
| 8 | GO:0048046: apoplast | 6.93E-04 |
| 9 | GO:0005886: plasma membrane | 9.64E-04 |
| 10 | GO:0009527: plastid outer membrane | 1.31E-03 |
| 11 | GO:0000178: exosome (RNase complex) | 1.66E-03 |
| 12 | GO:0009505: plant-type cell wall | 2.13E-03 |
| 13 | GO:0016021: integral component of membrane | 2.73E-03 |
| 14 | GO:0009570: chloroplast stroma | 3.16E-03 |
| 15 | GO:0009506: plasmodesma | 3.32E-03 |
| 16 | GO:0009941: chloroplast envelope | 3.81E-03 |
| 17 | GO:0045298: tubulin complex | 4.35E-03 |
| 18 | GO:0005763: mitochondrial small ribosomal subunit | 4.35E-03 |
| 19 | GO:0005884: actin filament | 5.99E-03 |
| 20 | GO:0009535: chloroplast thylakoid membrane | 6.67E-03 |
| 21 | GO:0005618: cell wall | 7.29E-03 |
| 22 | GO:0009534: chloroplast thylakoid | 8.14E-03 |
| 23 | GO:0030176: integral component of endoplasmic reticulum membrane | 8.47E-03 |
| 24 | GO:0009532: plastid stroma | 1.13E-02 |
| 25 | GO:0009543: chloroplast thylakoid lumen | 1.32E-02 |
| 26 | GO:0005576: extracellular region | 1.36E-02 |
| 27 | GO:0005887: integral component of plasma membrane | 1.75E-02 |
| 28 | GO:0009523: photosystem II | 1.77E-02 |
| 29 | GO:0005778: peroxisomal membrane | 2.22E-02 |
| 30 | GO:0010319: stromule | 2.22E-02 |
| 31 | GO:0022626: cytosolic ribosome | 2.32E-02 |
| 32 | GO:0016020: membrane | 2.32E-02 |
| 33 | GO:0000932: P-body | 2.41E-02 |
| 34 | GO:0009707: chloroplast outer membrane | 2.91E-02 |
| 35 | GO:0005789: endoplasmic reticulum membrane | 3.32E-02 |
| 36 | GO:0005773: vacuole | 3.45E-02 |
| 37 | GO:0022625: cytosolic large ribosomal subunit | 3.68E-02 |
| 38 | GO:0031977: thylakoid lumen | 3.89E-02 |
| 39 | GO:0005802: trans-Golgi network | 4.39E-02 |