GO Enrichment Analysis of Co-expressed Genes with
AT1G11720
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0098586: cellular response to virus | 0.00E+00 |
| 2 | GO:0017009: protein-phycocyanobilin linkage | 0.00E+00 |
| 3 | GO:0046838: phosphorylated carbohydrate dephosphorylation | 0.00E+00 |
| 4 | GO:0010021: amylopectin biosynthetic process | 6.70E-06 |
| 5 | GO:0010304: PSII associated light-harvesting complex II catabolic process | 1.70E-05 |
| 6 | GO:0009704: de-etiolation | 4.35E-05 |
| 7 | GO:0010206: photosystem II repair | 6.88E-05 |
| 8 | GO:0010205: photoinhibition | 8.37E-05 |
| 9 | GO:0051775: response to redox state | 8.43E-05 |
| 10 | GO:0071277: cellular response to calcium ion | 8.43E-05 |
| 11 | GO:0009773: photosynthetic electron transport in photosystem I | 1.18E-04 |
| 12 | GO:0010020: chloroplast fission | 1.80E-04 |
| 13 | GO:0009644: response to high light intensity | 1.85E-04 |
| 14 | GO:0046741: transport of virus in host, tissue to tissue | 2.00E-04 |
| 15 | GO:0042853: L-alanine catabolic process | 2.00E-04 |
| 16 | GO:0009915: phloem sucrose loading | 2.00E-04 |
| 17 | GO:0080005: photosystem stoichiometry adjustment | 2.00E-04 |
| 18 | GO:0016122: xanthophyll metabolic process | 2.00E-04 |
| 19 | GO:0071484: cellular response to light intensity | 4.84E-04 |
| 20 | GO:0006107: oxaloacetate metabolic process | 4.84E-04 |
| 21 | GO:0043572: plastid fission | 4.84E-04 |
| 22 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 4.84E-04 |
| 23 | GO:0006662: glycerol ether metabolic process | 5.10E-04 |
| 24 | GO:0009058: biosynthetic process | 5.67E-04 |
| 25 | GO:0019252: starch biosynthetic process | 5.85E-04 |
| 26 | GO:0006109: regulation of carbohydrate metabolic process | 6.44E-04 |
| 27 | GO:0015994: chlorophyll metabolic process | 6.44E-04 |
| 28 | GO:0006734: NADH metabolic process | 6.44E-04 |
| 29 | GO:0009247: glycolipid biosynthetic process | 8.14E-04 |
| 30 | GO:0043097: pyrimidine nucleoside salvage | 8.14E-04 |
| 31 | GO:0010117: photoprotection | 8.14E-04 |
| 32 | GO:0006206: pyrimidine nucleobase metabolic process | 9.94E-04 |
| 33 | GO:0010190: cytochrome b6f complex assembly | 9.94E-04 |
| 34 | GO:0010189: vitamin E biosynthetic process | 1.18E-03 |
| 35 | GO:0009854: oxidative photosynthetic carbon pathway | 1.18E-03 |
| 36 | GO:0055114: oxidation-reduction process | 1.33E-03 |
| 37 | GO:0006810: transport | 1.39E-03 |
| 38 | GO:0009645: response to low light intensity stimulus | 1.39E-03 |
| 39 | GO:0009853: photorespiration | 1.44E-03 |
| 40 | GO:0034599: cellular response to oxidative stress | 1.50E-03 |
| 41 | GO:0016559: peroxisome fission | 1.60E-03 |
| 42 | GO:0048564: photosystem I assembly | 1.60E-03 |
| 43 | GO:0005978: glycogen biosynthetic process | 1.60E-03 |
| 44 | GO:0009642: response to light intensity | 1.60E-03 |
| 45 | GO:0019375: galactolipid biosynthetic process | 1.60E-03 |
| 46 | GO:0071482: cellular response to light stimulus | 1.83E-03 |
| 47 | GO:0006098: pentose-phosphate shunt | 2.06E-03 |
| 48 | GO:0009821: alkaloid biosynthetic process | 2.06E-03 |
| 49 | GO:0034765: regulation of ion transmembrane transport | 2.06E-03 |
| 50 | GO:0090333: regulation of stomatal closure | 2.06E-03 |
| 51 | GO:0000373: Group II intron splicing | 2.06E-03 |
| 52 | GO:0015979: photosynthesis | 2.10E-03 |
| 53 | GO:0005982: starch metabolic process | 2.30E-03 |
| 54 | GO:0043085: positive regulation of catalytic activity | 2.82E-03 |
| 55 | GO:0018119: peptidyl-cysteine S-nitrosylation | 2.82E-03 |
| 56 | GO:0005983: starch catabolic process | 3.09E-03 |
| 57 | GO:0006094: gluconeogenesis | 3.37E-03 |
| 58 | GO:0009767: photosynthetic electron transport chain | 3.37E-03 |
| 59 | GO:0006108: malate metabolic process | 3.37E-03 |
| 60 | GO:0019253: reductive pentose-phosphate cycle | 3.66E-03 |
| 61 | GO:0009266: response to temperature stimulus | 3.66E-03 |
| 62 | GO:0051302: regulation of cell division | 4.89E-03 |
| 63 | GO:0007017: microtubule-based process | 4.89E-03 |
| 64 | GO:0009768: photosynthesis, light harvesting in photosystem I | 4.89E-03 |
| 65 | GO:0009409: response to cold | 5.21E-03 |
| 66 | GO:0016226: iron-sulfur cluster assembly | 5.55E-03 |
| 67 | GO:0042631: cellular response to water deprivation | 6.97E-03 |
| 68 | GO:0042391: regulation of membrane potential | 6.97E-03 |
| 69 | GO:0048544: recognition of pollen | 7.72E-03 |
| 70 | GO:0006814: sodium ion transport | 7.72E-03 |
| 71 | GO:0009791: post-embryonic development | 8.10E-03 |
| 72 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 8.50E-03 |
| 73 | GO:0000302: response to reactive oxygen species | 8.50E-03 |
| 74 | GO:0019761: glucosinolate biosynthetic process | 8.90E-03 |
| 75 | GO:0030163: protein catabolic process | 9.30E-03 |
| 76 | GO:0009658: chloroplast organization | 9.31E-03 |
| 77 | GO:0071805: potassium ion transmembrane transport | 1.01E-02 |
| 78 | GO:0016126: sterol biosynthetic process | 1.10E-02 |
| 79 | GO:0010027: thylakoid membrane organization | 1.10E-02 |
| 80 | GO:0018298: protein-chromophore linkage | 1.33E-02 |
| 81 | GO:0045454: cell redox homeostasis | 1.38E-02 |
| 82 | GO:0006099: tricarboxylic acid cycle | 1.62E-02 |
| 83 | GO:0006629: lipid metabolic process | 1.71E-02 |
| 84 | GO:0006631: fatty acid metabolic process | 1.77E-02 |
| 85 | GO:0006508: proteolysis | 1.80E-02 |
| 86 | GO:0008152: metabolic process | 1.89E-02 |
| 87 | GO:0006855: drug transmembrane transport | 2.10E-02 |
| 88 | GO:0031347: regulation of defense response | 2.15E-02 |
| 89 | GO:0006417: regulation of translation | 2.50E-02 |
| 90 | GO:0006096: glycolytic process | 2.62E-02 |
| 91 | GO:0043086: negative regulation of catalytic activity | 2.62E-02 |
| 92 | GO:0009735: response to cytokinin | 2.78E-02 |
| 93 | GO:0009611: response to wounding | 3.10E-02 |
| 94 | GO:0007275: multicellular organism development | 3.43E-02 |
| 95 | GO:0009845: seed germination | 3.70E-02 |
| 96 | GO:0009790: embryo development | 3.91E-02 |
| 97 | GO:0007623: circadian rhythm | 4.40E-02 |
| 98 | GO:0009451: RNA modification | 4.47E-02 |
| 99 | GO:0006470: protein dephosphorylation | 4.84E-02 |
| 100 | GO:0010468: regulation of gene expression | 4.99E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046554: malate dehydrogenase (NADP+) activity | 0.00E+00 |
| 2 | GO:0009976: tocopherol cyclase activity | 0.00E+00 |
| 3 | GO:0008974: phosphoribulokinase activity | 0.00E+00 |
| 4 | GO:0008465: glycerate dehydrogenase activity | 0.00E+00 |
| 5 | GO:1990534: thermospermine oxidase activity | 0.00E+00 |
| 6 | GO:0102193: protein-ribulosamine 3-kinase activity | 0.00E+00 |
| 7 | GO:0035798: 2-alkenal reductase (NADP+) activity | 0.00E+00 |
| 8 | GO:0004176: ATP-dependent peptidase activity | 9.17E-06 |
| 9 | GO:0048038: quinone binding | 3.01E-05 |
| 10 | GO:0035671: enone reductase activity | 8.43E-05 |
| 11 | GO:0047958: glycine:2-oxoglutarate aminotransferase activity | 8.43E-05 |
| 12 | GO:0050308: sugar-phosphatase activity | 8.43E-05 |
| 13 | GO:0019203: carbohydrate phosphatase activity | 8.43E-05 |
| 14 | GO:0008746: NAD(P)+ transhydrogenase activity | 8.43E-05 |
| 15 | GO:0004222: metalloendopeptidase activity | 9.38E-05 |
| 16 | GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity | 2.00E-04 |
| 17 | GO:0033201: alpha-1,4-glucan synthase activity | 2.00E-04 |
| 18 | GO:0003844: 1,4-alpha-glucan branching enzyme activity | 2.00E-04 |
| 19 | GO:0043169: cation binding | 3.35E-04 |
| 20 | GO:0004373: glycogen (starch) synthase activity | 3.35E-04 |
| 21 | GO:0008253: 5'-nucleotidase activity | 3.35E-04 |
| 22 | GO:0047134: protein-disulfide reductase activity | 4.38E-04 |
| 23 | GO:0008508: bile acid:sodium symporter activity | 4.84E-04 |
| 24 | GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity | 4.84E-04 |
| 25 | GO:0035250: UDP-galactosyltransferase activity | 4.84E-04 |
| 26 | GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity | 4.84E-04 |
| 27 | GO:0004791: thioredoxin-disulfide reductase activity | 5.47E-04 |
| 28 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 6.44E-04 |
| 29 | GO:0008453: alanine-glyoxylate transaminase activity | 6.44E-04 |
| 30 | GO:0004506: squalene monooxygenase activity | 6.44E-04 |
| 31 | GO:0009011: starch synthase activity | 6.44E-04 |
| 32 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 7.08E-04 |
| 33 | GO:0008237: metallopeptidase activity | 7.98E-04 |
| 34 | GO:0004332: fructose-bisphosphate aldolase activity | 9.94E-04 |
| 35 | GO:0016615: malate dehydrogenase activity | 9.94E-04 |
| 36 | GO:2001070: starch binding | 9.94E-04 |
| 37 | GO:0016491: oxidoreductase activity | 1.15E-03 |
| 38 | GO:0030060: L-malate dehydrogenase activity | 1.18E-03 |
| 39 | GO:0004849: uridine kinase activity | 1.18E-03 |
| 40 | GO:0005242: inward rectifier potassium channel activity | 1.18E-03 |
| 41 | GO:0043022: ribosome binding | 1.60E-03 |
| 42 | GO:0008135: translation factor activity, RNA binding | 1.83E-03 |
| 43 | GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors | 2.06E-03 |
| 44 | GO:0008138: protein tyrosine/serine/threonine phosphatase activity | 2.06E-03 |
| 45 | GO:0016844: strictosidine synthase activity | 2.30E-03 |
| 46 | GO:0008047: enzyme activator activity | 2.56E-03 |
| 47 | GO:0047372: acylglycerol lipase activity | 2.82E-03 |
| 48 | GO:0015035: protein disulfide oxidoreductase activity | 3.60E-03 |
| 49 | GO:0008266: poly(U) RNA binding | 3.66E-03 |
| 50 | GO:0008131: primary amine oxidase activity | 3.66E-03 |
| 51 | GO:0031409: pigment binding | 4.26E-03 |
| 52 | GO:0004857: enzyme inhibitor activity | 4.57E-03 |
| 53 | GO:0051536: iron-sulfur cluster binding | 4.57E-03 |
| 54 | GO:0030551: cyclic nucleotide binding | 6.97E-03 |
| 55 | GO:0005249: voltage-gated potassium channel activity | 6.97E-03 |
| 56 | GO:0042802: identical protein binding | 7.64E-03 |
| 57 | GO:0016853: isomerase activity | 7.72E-03 |
| 58 | GO:0051213: dioxygenase activity | 1.10E-02 |
| 59 | GO:0005525: GTP binding | 1.13E-02 |
| 60 | GO:0016168: chlorophyll binding | 1.14E-02 |
| 61 | GO:0015238: drug transmembrane transporter activity | 1.37E-02 |
| 62 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 1.57E-02 |
| 63 | GO:0003746: translation elongation factor activity | 1.57E-02 |
| 64 | GO:0003924: GTPase activity | 1.71E-02 |
| 65 | GO:0051287: NAD binding | 2.15E-02 |
| 66 | GO:0003777: microtubule motor activity | 2.50E-02 |
| 67 | GO:0016887: ATPase activity | 2.65E-02 |
| 68 | GO:0016874: ligase activity | 2.86E-02 |
| 69 | GO:0016829: lyase activity | 3.70E-02 |
| 70 | GO:0030170: pyridoxal phosphate binding | 3.77E-02 |
| 71 | GO:0016787: hydrolase activity | 3.82E-02 |
| 72 | GO:0015297: antiporter activity | 4.26E-02 |
| 73 | GO:0008017: microtubule binding | 4.55E-02 |
| 74 | GO:0008194: UDP-glycosyltransferase activity | 4.77E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009575: chromoplast stroma | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 1.08E-25 |
| 3 | GO:0009534: chloroplast thylakoid | 3.35E-17 |
| 4 | GO:0009941: chloroplast envelope | 1.64E-15 |
| 5 | GO:0009535: chloroplast thylakoid membrane | 4.69E-13 |
| 6 | GO:0009570: chloroplast stroma | 5.52E-12 |
| 7 | GO:0009579: thylakoid | 5.49E-10 |
| 8 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 3.92E-09 |
| 9 | GO:0031977: thylakoid lumen | 6.50E-06 |
| 10 | GO:0010287: plastoglobule | 4.11E-05 |
| 11 | GO:0009501: amyloplast | 4.35E-05 |
| 12 | GO:0009782: photosystem I antenna complex | 8.43E-05 |
| 13 | GO:0009706: chloroplast inner membrane | 3.98E-04 |
| 14 | GO:0048046: apoplast | 5.17E-04 |
| 15 | GO:0030286: dynein complex | 6.44E-04 |
| 16 | GO:0010319: stromule | 7.98E-04 |
| 17 | GO:0009707: chloroplast outer membrane | 1.15E-03 |
| 18 | GO:0030076: light-harvesting complex | 3.95E-03 |
| 19 | GO:0005875: microtubule associated complex | 4.26E-03 |
| 20 | GO:0009654: photosystem II oxygen evolving complex | 4.89E-03 |
| 21 | GO:0005777: peroxisome | 7.16E-03 |
| 22 | GO:0019898: extrinsic component of membrane | 8.10E-03 |
| 23 | GO:0030529: intracellular ribonucleoprotein complex | 1.10E-02 |
| 24 | GO:0009543: chloroplast thylakoid lumen | 3.50E-02 |
| 25 | GO:0005623: cell | 3.57E-02 |