co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G11310

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010401: pectic galactan metabolic process	0.00E+00
2	GO:0009992: cellular water homeostasis	0.00E+00
3	GO:0019428: allantoin biosynthetic process	0.00E+00
4	GO:0051553: flavone biosynthetic process	0.00E+00
5	GO:0032499: detection of peptidoglycan	0.00E+00
6	GO:0002752: cell surface pattern recognition receptor signaling pathway	0.00E+00
7	GO:0072660: maintenance of protein location in plasma membrane	0.00E+00
8	GO:0042742: defense response to bacterium	2.04E-10
9	GO:0006468: protein phosphorylation	7.08E-10
10	GO:0006952: defense response	4.17E-07
11	GO:0080185: effector dependent induction by symbiont of host immune response	3.29E-06
12	GO:0007165: signal transduction	8.75E-06
13	GO:0048194: Golgi vesicle budding	2.67E-05
14	GO:0009617: response to bacterium	3.59E-05
15	GO:0060548: negative regulation of cell death	4.83E-05
16	GO:0009620: response to fungus	4.99E-05
17	GO:0030162: regulation of proteolysis	2.55E-04
18	GO:0001560: regulation of cell growth by extracellular stimulus	2.68E-04
19	GO:0016337: single organismal cell-cell adhesion	2.68E-04
20	GO:0000077: DNA damage checkpoint	2.68E-04
21	GO:0019628: urate catabolic process	2.68E-04
22	GO:0051245: negative regulation of cellular defense response	2.68E-04
23	GO:0046938: phytochelatin biosynthetic process	2.68E-04
24	GO:0043985: histone H4-R3 methylation	2.68E-04
25	GO:0006643: membrane lipid metabolic process	2.68E-04
26	GO:0055081: anion homeostasis	2.68E-04
27	GO:0002143: tRNA wobble position uridine thiolation	2.68E-04
28	GO:0006680: glucosylceramide catabolic process	2.68E-04
29	GO:0032491: detection of molecule of fungal origin	2.68E-04
30	GO:0060862: negative regulation of floral organ abscission	2.68E-04
31	GO:0006144: purine nucleobase metabolic process	2.68E-04
32	GO:0006623: protein targeting to vacuole	2.85E-04
33	GO:0006002: fructose 6-phosphate metabolic process	3.14E-04
34	GO:2000031: regulation of salicylic acid mediated signaling pathway	3.14E-04
35	GO:0043069: negative regulation of programmed cell death	5.26E-04
36	GO:0009816: defense response to bacterium, incompatible interaction	5.44E-04
37	GO:0009627: systemic acquired resistance	5.83E-04
38	GO:0006024: glycosaminoglycan biosynthetic process	5.89E-04
39	GO:0052541: plant-type cell wall cellulose metabolic process	5.89E-04
40	GO:0040020: regulation of meiotic nuclear division	5.89E-04
41	GO:0006212: uracil catabolic process	5.89E-04
42	GO:0031349: positive regulation of defense response	5.89E-04
43	GO:0019483: beta-alanine biosynthetic process	5.89E-04
44	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	5.89E-04
45	GO:0008535: respiratory chain complex IV assembly	5.89E-04
46	GO:0015012: heparan sulfate proteoglycan biosynthetic process	5.89E-04
47	GO:0002221: pattern recognition receptor signaling pathway	5.89E-04
48	GO:0009817: defense response to fungus, incompatible interaction	7.09E-04
49	GO:0010498: proteasomal protein catabolic process	9.55E-04
50	GO:0042344: indole glucosinolate catabolic process	9.55E-04
51	GO:0016045: detection of bacterium	9.55E-04
52	GO:1900140: regulation of seedling development	9.55E-04
53	GO:0072661: protein targeting to plasma membrane	9.55E-04
54	GO:0006517: protein deglycosylation	9.55E-04
55	GO:0070588: calcium ion transmembrane transport	9.87E-04
56	GO:0009863: salicylic acid mediated signaling pathway	1.21E-03
57	GO:0009751: response to salicylic acid	1.26E-03
58	GO:0009311: oligosaccharide metabolic process	1.36E-03
59	GO:0002239: response to oomycetes	1.36E-03
60	GO:0072583: clathrin-dependent endocytosis	1.36E-03
61	GO:0010148: transpiration	1.36E-03
62	GO:0015700: arsenite transport	1.36E-03
63	GO:0006612: protein targeting to membrane	1.36E-03
64	GO:0002679: respiratory burst involved in defense response	1.36E-03
65	GO:0071323: cellular response to chitin	1.36E-03
66	GO:0051289: protein homotetramerization	1.36E-03
67	GO:0000187: activation of MAPK activity	1.36E-03
68	GO:0007166: cell surface receptor signaling pathway	1.38E-03
69	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.60E-03
70	GO:0031348: negative regulation of defense response	1.60E-03
71	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	1.66E-03
72	GO:0010363: regulation of plant-type hypersensitive response	1.83E-03
73	GO:0071219: cellular response to molecule of bacterial origin	1.83E-03
74	GO:0080142: regulation of salicylic acid biosynthetic process	1.83E-03
75	GO:0044804: nucleophagy	1.83E-03
76	GO:0042391: regulation of membrane potential	2.21E-03
77	GO:0006665: sphingolipid metabolic process	2.33E-03
78	GO:0000422: mitophagy	2.33E-03
79	GO:0031365: N-terminal protein amino acid modification	2.33E-03
80	GO:0061025: membrane fusion	2.56E-03
81	GO:0000045: autophagosome assembly	2.88E-03
82	GO:0060918: auxin transport	2.88E-03
83	GO:0010942: positive regulation of cell death	2.88E-03
84	GO:0006777: Mo-molybdopterin cofactor biosynthetic process	2.88E-03
85	GO:0010200: response to chitin	3.20E-03
86	GO:0030163: protein catabolic process	3.35E-03
87	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	3.46E-03
88	GO:0000911: cytokinesis by cell plate formation	3.46E-03
89	GO:0009612: response to mechanical stimulus	3.46E-03
90	GO:0006694: steroid biosynthetic process	3.46E-03
91	GO:0046470: phosphatidylcholine metabolic process	4.08E-03
92	GO:0043090: amino acid import	4.08E-03
93	GO:0071446: cellular response to salicylic acid stimulus	4.08E-03
94	GO:0010044: response to aluminum ion	4.08E-03
95	GO:0010161: red light signaling pathway	4.08E-03
96	GO:0006886: intracellular protein transport	4.20E-03
97	GO:0050832: defense response to fungus	4.31E-03
98	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	4.73E-03
99	GO:0006491: N-glycan processing	4.73E-03
100	GO:0006102: isocitrate metabolic process	4.73E-03
101	GO:0006075: (1->3)-beta-D-glucan biosynthetic process	5.42E-03
102	GO:0006367: transcription initiation from RNA polymerase II promoter	5.42E-03
103	GO:0043562: cellular response to nitrogen levels	5.42E-03
104	GO:0008219: cell death	5.54E-03
105	GO:0009813: flavonoid biosynthetic process	5.82E-03
106	GO:0015031: protein transport	5.95E-03
107	GO:0046685: response to arsenic-containing substance	6.14E-03
108	GO:0010332: response to gamma radiation	6.14E-03
109	GO:0051865: protein autoubiquitination	6.14E-03
110	GO:0010112: regulation of systemic acquired resistance	6.14E-03
111	GO:0010119: regulation of stomatal movement	6.40E-03
112	GO:0048268: clathrin coat assembly	6.90E-03
113	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	6.90E-03
114	GO:0006470: protein dephosphorylation	7.09E-03
115	GO:0006099: tricarboxylic acid cycle	7.34E-03
116	GO:0010468: regulation of gene expression	7.49E-03
117	GO:0007064: mitotic sister chromatid cohesion	7.68E-03
118	GO:0009870: defense response signaling pathway, resistance gene-dependent	7.68E-03
119	GO:0006887: exocytosis	8.35E-03
120	GO:0052544: defense response by callose deposition in cell wall	8.50E-03
121	GO:0019684: photosynthesis, light reaction	8.50E-03
122	GO:0010105: negative regulation of ethylene-activated signaling pathway	9.35E-03
123	GO:0010102: lateral root morphogenesis	1.02E-02
124	GO:0006807: nitrogen compound metabolic process	1.02E-02
125	GO:0055046: microgametogenesis	1.02E-02
126	GO:0031347: regulation of defense response	1.10E-02
127	GO:0002237: response to molecule of bacterial origin	1.11E-02
128	GO:0042343: indole glucosinolate metabolic process	1.21E-02
129	GO:0010030: positive regulation of seed germination	1.21E-02
130	GO:0010053: root epidermal cell differentiation	1.21E-02
131	GO:0080167: response to karrikin	1.37E-02
132	GO:0006487: protein N-linked glycosylation	1.40E-02
133	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.43E-02
134	GO:0006096: glycolytic process	1.45E-02
135	GO:0016192: vesicle-mediated transport	1.46E-02
136	GO:0046777: protein autophosphorylation	1.49E-02
137	GO:0009626: plant-type hypersensitive response	1.54E-02
138	GO:0048278: vesicle docking	1.61E-02
139	GO:0098542: defense response to other organism	1.61E-02
140	GO:0009814: defense response, incompatible interaction	1.71E-02
141	GO:0010227: floral organ abscission	1.82E-02
142	GO:0009742: brassinosteroid mediated signaling pathway	1.85E-02
143	GO:0009561: megagametogenesis	1.94E-02
144	GO:0009306: protein secretion	1.94E-02
145	GO:0010051: xylem and phloem pattern formation	2.17E-02
146	GO:0010087: phloem or xylem histogenesis	2.17E-02
147	GO:0008360: regulation of cell shape	2.29E-02
148	GO:0010197: polar nucleus fusion	2.29E-02
149	GO:0048544: recognition of pollen	2.41E-02
150	GO:0010183: pollen tube guidance	2.53E-02
151	GO:0002229: defense response to oomycetes	2.65E-02
152	GO:0000302: response to reactive oxygen species	2.65E-02
153	GO:0006891: intra-Golgi vesicle-mediated transport	2.65E-02
154	GO:0010150: leaf senescence	3.02E-02
155	GO:0045490: pectin catabolic process	3.02E-02
156	GO:0019760: glucosinolate metabolic process	3.04E-02
157	GO:0006904: vesicle docking involved in exocytosis	3.18E-02
158	GO:0001666: response to hypoxia	3.45E-02
159	GO:0009615: response to virus	3.45E-02
160	GO:0006906: vesicle fusion	3.73E-02
161	GO:0006950: response to stress	3.88E-02
162	GO:0006499: N-terminal protein myristoylation	4.47E-02
163	GO:0009407: toxin catabolic process	4.47E-02
164	GO:0009631: cold acclimation	4.62E-02
165	GO:0006865: amino acid transport	4.77E-02
166	GO:0009867: jasmonic acid mediated signaling pathway	4.93E-02
167	GO:0045087: innate immune response	4.93E-02

Rank	GO Term	Adjusted P value
1	GO:0033759: flavone synthase activity	0.00E+00
2	GO:0061604: molybdopterin-synthase sulfurtransferase activity	0.00E+00
3	GO:1901149: salicylic acid binding	0.00E+00
4	GO:0003837: beta-ureidopropionase activity	0.00E+00
5	GO:0033746: histone demethylase activity (H3-R2 specific)	0.00E+00
6	GO:0061605: molybdopterin-synthase adenylyltransferase activity	0.00E+00
7	GO:2001080: chitosan binding	0.00E+00
8	GO:0033971: hydroxyisourate hydrolase activity	0.00E+00
9	GO:0033749: histone demethylase activity (H4-R3 specific)	0.00E+00
10	GO:0051997: 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase activity	0.00E+00
11	GO:0005524: ATP binding	1.56E-09
12	GO:0004674: protein serine/threonine kinase activity	4.56E-09
13	GO:0016301: kinase activity	5.11E-09
14	GO:0004012: phospholipid-translocating ATPase activity	2.42E-06
15	GO:0004714: transmembrane receptor protein tyrosine kinase activity	5.93E-06
16	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	4.22E-05
17	GO:0004190: aspartic-type endopeptidase activity	6.15E-05
18	GO:0043531: ADP binding	8.78E-05
19	GO:0005516: calmodulin binding	1.38E-04
20	GO:0003872: 6-phosphofructokinase activity	2.02E-04
21	GO:0032050: clathrin heavy chain binding	2.68E-04
22	GO:0015085: calcium ion transmembrane transporter activity	2.68E-04
23	GO:0046870: cadmium ion binding	2.68E-04
24	GO:0015446: ATPase-coupled arsenite transmembrane transporter activity	2.68E-04
25	GO:0033925: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity	2.68E-04
26	GO:0004348: glucosylceramidase activity	2.68E-04
27	GO:0071992: phytochelatin transmembrane transporter activity	2.68E-04
28	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	2.68E-04
29	GO:0004713: protein tyrosine kinase activity	5.26E-04
30	GO:0038199: ethylene receptor activity	5.89E-04
31	GO:0030247: polysaccharide binding	6.23E-04
32	GO:0005388: calcium-transporting ATPase activity	7.86E-04
33	GO:0004672: protein kinase activity	8.06E-04
34	GO:0008265: Mo-molybdopterin cofactor sulfurase activity	9.55E-04
35	GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity	9.55E-04
36	GO:0030553: cGMP binding	9.87E-04
37	GO:0030552: cAMP binding	9.87E-04
38	GO:0005216: ion channel activity	1.33E-03
39	GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity	1.36E-03
40	GO:0004449: isocitrate dehydrogenase (NAD+) activity	1.36E-03
41	GO:0004792: thiosulfate sulfurtransferase activity	1.36E-03
42	GO:0051740: ethylene binding	1.36E-03
43	GO:0033612: receptor serine/threonine kinase binding	1.46E-03
44	GO:0019199: transmembrane receptor protein kinase activity	1.83E-03
45	GO:0043495: protein anchor	1.83E-03
46	GO:0004576: oligosaccharyl transferase activity	1.83E-03
47	GO:0030551: cyclic nucleotide binding	2.21E-03
48	GO:0005249: voltage-gated potassium channel activity	2.21E-03
49	GO:0045431: flavonol synthase activity	2.33E-03
50	GO:0008641: small protein activating enzyme activity	2.33E-03
51	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	2.33E-03
52	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	2.33E-03
53	GO:0030276: clathrin binding	2.39E-03
54	GO:0005509: calcium ion binding	3.17E-03
55	GO:0005261: cation channel activity	3.46E-03
56	GO:0004656: procollagen-proline 4-dioxygenase activity	3.46E-03
57	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	3.78E-03
58	GO:0008235: metalloexopeptidase activity	4.08E-03
59	GO:0043295: glutathione binding	4.08E-03
60	GO:0005515: protein binding	4.27E-03
61	GO:0004708: MAP kinase kinase activity	4.73E-03
62	GO:0046872: metal ion binding	5.30E-03
63	GO:0003843: 1,3-beta-D-glucan synthase activity	5.42E-03
64	GO:0004630: phospholipase D activity	5.42E-03
65	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	5.42E-03
66	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	5.47E-03
67	GO:0008138: protein tyrosine/serine/threonine phosphatase activity	6.14E-03
68	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	7.02E-03
69	GO:0005545: 1-phosphatidylinositol binding	7.68E-03
70	GO:0004673: protein histidine kinase activity	7.68E-03
71	GO:0004177: aminopeptidase activity	8.50E-03
72	GO:0005484: SNAP receptor activity	9.06E-03
73	GO:0000287: magnesium ion binding	1.02E-02
74	GO:0000155: phosphorelay sensor kinase activity	1.02E-02
75	GO:0008061: chitin binding	1.21E-02
76	GO:0004725: protein tyrosine phosphatase activity	1.30E-02
77	GO:0031625: ubiquitin protein ligase binding	1.36E-02
78	GO:0003954: NADH dehydrogenase activity	1.40E-02
79	GO:0031418: L-ascorbic acid binding	1.40E-02
80	GO:0035251: UDP-glucosyltransferase activity	1.61E-02
81	GO:0004707: MAP kinase activity	1.61E-02
82	GO:0008810: cellulase activity	1.82E-02
83	GO:0008514: organic anion transmembrane transporter activity	1.94E-02
84	GO:0030246: carbohydrate binding	2.05E-02
85	GO:0004872: receptor activity	2.53E-02
86	GO:0008565: protein transporter activity	2.62E-02
87	GO:0004806: triglyceride lipase activity	3.88E-02
88	GO:0004721: phosphoprotein phosphatase activity	3.88E-02
89	GO:0016798: hydrolase activity, acting on glycosyl bonds	3.88E-02
90	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	4.17E-02

Rank	GO Term	Adjusted P value
1	GO:0005674: transcription factor TFIIF complex	0.00E+00
2	GO:0005886: plasma membrane	2.20E-13
3	GO:0016021: integral component of membrane	7.22E-09
4	GO:0030665: clathrin-coated vesicle membrane	1.61E-05
5	GO:0017119: Golgi transport complex	2.12E-05
6	GO:0005945: 6-phosphofructokinase complex	7.68E-05
7	GO:0005887: integral component of plasma membrane	1.11E-04
8	GO:0005802: trans-Golgi network	1.64E-04
9	GO:0045252: oxoglutarate dehydrogenase complex	2.68E-04
10	GO:0031234: extrinsic component of cytoplasmic side of plasma membrane	2.68E-04
11	GO:0009504: cell plate	2.85E-04
12	GO:0031304: intrinsic component of mitochondrial inner membrane	5.89E-04
13	GO:0070062: extracellular exosome	1.36E-03
14	GO:0000407: pre-autophagosomal structure	1.83E-03
15	GO:0008250: oligosaccharyltransferase complex	2.33E-03
16	GO:0019898: extrinsic component of membrane	2.75E-03
17	GO:0030131: clathrin adaptor complex	4.73E-03
18	GO:0000148: 1,3-beta-D-glucan synthase complex	5.42E-03
19	GO:0019005: SCF ubiquitin ligase complex	5.54E-03
20	GO:0030125: clathrin vesicle coat	7.68E-03
21	GO:0005794: Golgi apparatus	7.79E-03
22	GO:0031902: late endosome membrane	8.35E-03
23	GO:0005768: endosome	1.01E-02
24	GO:0005795: Golgi stack	1.21E-02
25	GO:0009506: plasmodesma	1.43E-02
26	GO:0005774: vacuolar membrane	1.61E-02
27	GO:0005905: clathrin-coated pit	1.61E-02
28	GO:0009505: plant-type cell wall	1.78E-02
29	GO:0030136: clathrin-coated vesicle	2.05E-02
30	GO:0005789: endoplasmic reticulum membrane	2.50E-02
31	GO:0000145: exocyst	2.78E-02
32	GO:0071944: cell periphery	2.91E-02
33	GO:0016020: membrane	3.66E-02
34	GO:0005773: vacuole	3.86E-02