GO Enrichment Analysis of Co-expressed Genes with
AT1G10590
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0072321: chaperone-mediated protein transport | 0.00E+00 |
| 2 | GO:0039694: viral RNA genome replication | 0.00E+00 |
| 3 | GO:0031564: transcription antitermination | 0.00E+00 |
| 4 | GO:0000466: maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 0.00E+00 |
| 5 | GO:2000072: regulation of defense response to fungus, incompatible interaction | 1.24E-07 |
| 6 | GO:0000460: maturation of 5.8S rRNA | 2.26E-06 |
| 7 | GO:0000470: maturation of LSU-rRNA | 5.95E-06 |
| 8 | GO:0006422: aspartyl-tRNA aminoacylation | 4.45E-05 |
| 9 | GO:0006626: protein targeting to mitochondrion | 6.27E-05 |
| 10 | GO:0000027: ribosomal large subunit assembly | 1.05E-04 |
| 11 | GO:0009220: pyrimidine ribonucleotide biosynthetic process | 1.10E-04 |
| 12 | GO:0002221: pattern recognition receptor signaling pathway | 1.10E-04 |
| 13 | GO:0019919: peptidyl-arginine methylation, to asymmetrical-dimethyl arginine | 1.10E-04 |
| 14 | GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 1.10E-04 |
| 15 | GO:0001927: exocyst assembly | 1.89E-04 |
| 16 | GO:0045039: protein import into mitochondrial inner membrane | 1.89E-04 |
| 17 | GO:0006421: asparaginyl-tRNA aminoacylation | 1.89E-04 |
| 18 | GO:0006413: translational initiation | 2.48E-04 |
| 19 | GO:0051601: exocyst localization | 2.78E-04 |
| 20 | GO:0044205: 'de novo' UMP biosynthetic process | 3.73E-04 |
| 21 | GO:0031087: deadenylation-independent decapping of nuclear-transcribed mRNA | 3.73E-04 |
| 22 | GO:0080142: regulation of salicylic acid biosynthetic process | 3.73E-04 |
| 23 | GO:0000956: nuclear-transcribed mRNA catabolic process | 3.73E-04 |
| 24 | GO:0018279: protein N-linked glycosylation via asparagine | 4.75E-04 |
| 25 | GO:0045116: protein neddylation | 4.75E-04 |
| 26 | GO:0000741: karyogamy | 5.82E-04 |
| 27 | GO:0045040: protein import into mitochondrial outer membrane | 5.82E-04 |
| 28 | GO:0045087: innate immune response | 6.50E-04 |
| 29 | GO:0033962: cytoplasmic mRNA processing body assembly | 6.94E-04 |
| 30 | GO:0000245: spliceosomal complex assembly | 6.94E-04 |
| 31 | GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response | 6.94E-04 |
| 32 | GO:0009793: embryo development ending in seed dormancy | 6.95E-04 |
| 33 | GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process | 8.11E-04 |
| 34 | GO:0007389: pattern specification process | 1.06E-03 |
| 35 | GO:0060321: acceptance of pollen | 1.06E-03 |
| 36 | GO:0007338: single fertilization | 1.19E-03 |
| 37 | GO:0046685: response to arsenic-containing substance | 1.19E-03 |
| 38 | GO:0000387: spliceosomal snRNP assembly | 1.32E-03 |
| 39 | GO:0000103: sulfate assimilation | 1.47E-03 |
| 40 | GO:0048829: root cap development | 1.47E-03 |
| 41 | GO:0009553: embryo sac development | 1.50E-03 |
| 42 | GO:0009734: auxin-activated signaling pathway | 1.55E-03 |
| 43 | GO:0071365: cellular response to auxin stimulus | 1.77E-03 |
| 44 | GO:0030150: protein import into mitochondrial matrix | 2.60E-03 |
| 45 | GO:0010187: negative regulation of seed germination | 2.60E-03 |
| 46 | GO:0016575: histone deacetylation | 2.77E-03 |
| 47 | GO:0008380: RNA splicing | 3.13E-03 |
| 48 | GO:0007131: reciprocal meiotic recombination | 3.14E-03 |
| 49 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 3.73E-03 |
| 50 | GO:0010501: RNA secondary structure unwinding | 3.93E-03 |
| 51 | GO:0042254: ribosome biogenesis | 4.12E-03 |
| 52 | GO:0006520: cellular amino acid metabolic process | 4.14E-03 |
| 53 | GO:0006662: glycerol ether metabolic process | 4.14E-03 |
| 54 | GO:0010197: polar nucleus fusion | 4.14E-03 |
| 55 | GO:0009414: response to water deprivation | 4.90E-03 |
| 56 | GO:0030163: protein catabolic process | 5.22E-03 |
| 57 | GO:0009567: double fertilization forming a zygote and endosperm | 5.45E-03 |
| 58 | GO:0010252: auxin homeostasis | 5.45E-03 |
| 59 | GO:0015031: protein transport | 6.85E-03 |
| 60 | GO:0006499: N-terminal protein myristoylation | 7.91E-03 |
| 61 | GO:0009631: cold acclimation | 8.18E-03 |
| 62 | GO:0009867: jasmonic acid mediated signaling pathway | 8.71E-03 |
| 63 | GO:0046686: response to cadmium ion | 8.87E-03 |
| 64 | GO:0034599: cellular response to oxidative stress | 8.99E-03 |
| 65 | GO:0006887: exocytosis | 9.83E-03 |
| 66 | GO:0009965: leaf morphogenesis | 1.13E-02 |
| 67 | GO:0009664: plant-type cell wall organization | 1.22E-02 |
| 68 | GO:0006417: regulation of translation | 1.38E-02 |
| 69 | GO:0018105: peptidyl-serine phosphorylation | 1.68E-02 |
| 70 | GO:0006511: ubiquitin-dependent protein catabolic process | 1.79E-02 |
| 71 | GO:0000398: mRNA splicing, via spliceosome | 1.83E-02 |
| 72 | GO:0009845: seed germination | 2.05E-02 |
| 73 | GO:0016036: cellular response to phosphate starvation | 2.31E-02 |
| 74 | GO:0009651: response to salt stress | 2.34E-02 |
| 75 | GO:0010228: vegetative to reproductive phase transition of meristem | 2.51E-02 |
| 76 | GO:0006470: protein dephosphorylation | 2.68E-02 |
| 77 | GO:0007166: cell surface receptor signaling pathway | 2.68E-02 |
| 78 | GO:0009617: response to bacterium | 2.76E-02 |
| 79 | GO:0009826: unidimensional cell growth | 3.23E-02 |
| 80 | GO:0006970: response to osmotic stress | 3.50E-02 |
| 81 | GO:0009409: response to cold | 3.60E-02 |
| 82 | GO:0016192: vesicle-mediated transport | 4.01E-02 |
| 83 | GO:0006412: translation | 4.04E-02 |
| 84 | GO:0046777: protein autophosphorylation | 4.06E-02 |
| 85 | GO:0045454: cell redox homeostasis | 4.40E-02 |
| 86 | GO:0006886: intracellular protein transport | 4.50E-02 |
| 87 | GO:0032259: methylation | 4.95E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004070: aspartate carbamoyltransferase activity | 0.00E+00 |
| 2 | GO:0001072: transcription antitermination factor activity, RNA binding | 0.00E+00 |
| 3 | GO:0000166: nucleotide binding | 3.23E-09 |
| 4 | GO:0042134: rRNA primary transcript binding | 4.45E-05 |
| 5 | GO:0004815: aspartate-tRNA ligase activity | 4.45E-05 |
| 6 | GO:0016277: [myelin basic protein]-arginine N-methyltransferase activity | 1.10E-04 |
| 7 | GO:0035242: protein-arginine omega-N asymmetric methyltransferase activity | 1.10E-04 |
| 8 | GO:0019781: NEDD8 activating enzyme activity | 1.10E-04 |
| 9 | GO:0043021: ribonucleoprotein complex binding | 1.10E-04 |
| 10 | GO:0016743: carboxyl- or carbamoyltransferase activity | 1.10E-04 |
| 11 | GO:0035241: protein-arginine omega-N monomethyltransferase activity | 1.10E-04 |
| 12 | GO:0004816: asparagine-tRNA ligase activity | 1.89E-04 |
| 13 | GO:0008469: histone-arginine N-methyltransferase activity | 1.89E-04 |
| 14 | GO:0035198: miRNA binding | 2.78E-04 |
| 15 | GO:0003743: translation initiation factor activity | 3.34E-04 |
| 16 | GO:0017070: U6 snRNA binding | 4.75E-04 |
| 17 | GO:0008641: small protein activating enzyme activity | 4.75E-04 |
| 18 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 4.75E-04 |
| 19 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 5.18E-04 |
| 20 | GO:0031369: translation initiation factor binding | 5.82E-04 |
| 21 | GO:0008320: protein transmembrane transporter activity | 8.11E-04 |
| 22 | GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific) | 1.06E-03 |
| 23 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 1.92E-03 |
| 24 | GO:0004407: histone deacetylase activity | 2.60E-03 |
| 25 | GO:0047134: protein-disulfide reductase activity | 3.73E-03 |
| 26 | GO:0008168: methyltransferase activity | 3.89E-03 |
| 27 | GO:0001085: RNA polymerase II transcription factor binding | 4.14E-03 |
| 28 | GO:0005515: protein binding | 4.30E-03 |
| 29 | GO:0004791: thioredoxin-disulfide reductase activity | 4.35E-03 |
| 30 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 5.22E-03 |
| 31 | GO:0016597: amino acid binding | 5.91E-03 |
| 32 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 6.64E-03 |
| 33 | GO:0004721: phosphoprotein phosphatase activity | 6.89E-03 |
| 34 | GO:0004004: ATP-dependent RNA helicase activity | 6.89E-03 |
| 35 | GO:0004683: calmodulin-dependent protein kinase activity | 6.89E-03 |
| 36 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 8.18E-03 |
| 37 | GO:0003697: single-stranded DNA binding | 8.71E-03 |
| 38 | GO:0003690: double-stranded DNA binding | 1.32E-02 |
| 39 | GO:0022857: transmembrane transporter activity | 1.58E-02 |
| 40 | GO:0015035: protein disulfide oxidoreductase activity | 1.68E-02 |
| 41 | GO:0008026: ATP-dependent helicase activity | 1.72E-02 |
| 42 | GO:0004386: helicase activity | 1.75E-02 |
| 43 | GO:0005507: copper ion binding | 1.87E-02 |
| 44 | GO:0019843: rRNA binding | 1.93E-02 |
| 45 | GO:0003723: RNA binding | 2.04E-02 |
| 46 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 2.12E-02 |
| 47 | GO:0008565: protein transporter activity | 2.20E-02 |
| 48 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 2.31E-02 |
| 49 | GO:0005524: ATP binding | 2.83E-02 |
| 50 | GO:0000287: magnesium ion binding | 3.27E-02 |
| 51 | GO:0003682: chromatin binding | 3.45E-02 |
| 52 | GO:0003729: mRNA binding | 3.95E-02 |
| 53 | GO:0004722: protein serine/threonine phosphatase activity | 4.69E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019034: viral replication complex | 0.00E+00 |
| 2 | GO:0042719: mitochondrial intermembrane space protein transporter complex | 0.00E+00 |
| 3 | GO:0005829: cytosol | 3.80E-07 |
| 4 | GO:0005730: nucleolus | 4.16E-07 |
| 5 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 2.18E-06 |
| 6 | GO:0030687: preribosome, large subunit precursor | 1.19E-05 |
| 7 | GO:0005852: eukaryotic translation initiation factor 3 complex | 4.59E-05 |
| 8 | GO:0070545: PeBoW complex | 1.10E-04 |
| 9 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 1.73E-04 |
| 10 | GO:0030658: transport vesicle membrane | 2.78E-04 |
| 11 | GO:0000932: P-body | 3.99E-04 |
| 12 | GO:0097526: spliceosomal tri-snRNP complex | 4.75E-04 |
| 13 | GO:0008250: oligosaccharyltransferase complex | 4.75E-04 |
| 14 | GO:0019005: SCF ubiquitin ligase complex | 5.18E-04 |
| 15 | GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane | 8.11E-04 |
| 16 | GO:0005743: mitochondrial inner membrane | 9.28E-04 |
| 17 | GO:0005688: U6 snRNP | 9.32E-04 |
| 18 | GO:0005742: mitochondrial outer membrane translocase complex | 1.06E-03 |
| 19 | GO:0048471: perinuclear region of cytoplasm | 1.61E-03 |
| 20 | GO:0005732: small nucleolar ribonucleoprotein complex | 1.68E-03 |
| 21 | GO:0005759: mitochondrial matrix | 2.40E-03 |
| 22 | GO:0043234: protein complex | 2.42E-03 |
| 23 | GO:0005758: mitochondrial intermembrane space | 2.60E-03 |
| 24 | GO:0005741: mitochondrial outer membrane | 2.96E-03 |
| 25 | GO:0000145: exocyst | 4.99E-03 |
| 26 | GO:0005840: ribosome | 5.36E-03 |
| 27 | GO:0032580: Golgi cisterna membrane | 5.45E-03 |
| 28 | GO:0005667: transcription factor complex | 6.64E-03 |
| 29 | GO:0005856: cytoskeleton | 1.13E-02 |
| 30 | GO:0005737: cytoplasm | 1.43E-02 |
| 31 | GO:0005681: spliceosomal complex | 1.45E-02 |
| 32 | GO:0005634: nucleus | 1.47E-02 |
| 33 | GO:0016607: nuclear speck | 1.48E-02 |
| 34 | GO:0005834: heterotrimeric G-protein complex | 1.51E-02 |
| 35 | GO:0005654: nucleoplasm | 1.90E-02 |
| 36 | GO:0009524: phragmoplast | 2.01E-02 |
| 37 | GO:0016020: membrane | 2.60E-02 |
| 38 | GO:0046658: anchored component of plasma membrane | 2.97E-02 |
| 39 | GO:0005789: endoplasmic reticulum membrane | 4.06E-02 |