Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G10360

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1904966: positive regulation of vitamin E biosynthetic process0.00E+00
2GO:0002184: cytoplasmic translational termination0.00E+00
3GO:0006003: fructose 2,6-bisphosphate metabolic process0.00E+00
4GO:1904964: positive regulation of phytol biosynthetic process0.00E+00
5GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate0.00E+00
6GO:0006780: uroporphyrinogen III biosynthetic process0.00E+00
7GO:0042371: vitamin K biosynthetic process0.00E+00
8GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation0.00E+00
9GO:0006399: tRNA metabolic process0.00E+00
10GO:0033494: ferulate metabolic process0.00E+00
11GO:0006000: fructose metabolic process0.00E+00
12GO:0061635: regulation of protein complex stability0.00E+00
13GO:1902326: positive regulation of chlorophyll biosynthetic process0.00E+00
14GO:0006428: isoleucyl-tRNA aminoacylation0.00E+00
15GO:0045176: apical protein localization0.00E+00
16GO:0006642: triglyceride mobilization0.00E+00
17GO:0006223: uracil salvage0.00E+00
18GO:0042821: pyridoxal biosynthetic process0.00E+00
19GO:0005996: monosaccharide metabolic process0.00E+00
20GO:0007638: mechanosensory behavior0.00E+00
21GO:0070125: mitochondrial translational elongation0.00E+00
22GO:0035970: peptidyl-threonine dephosphorylation0.00E+00
23GO:0070272: proton-transporting ATP synthase complex biogenesis0.00E+00
24GO:0016553: base conversion or substitution editing0.00E+00
25GO:0090042: tubulin deacetylation0.00E+00
26GO:0006429: leucyl-tRNA aminoacylation0.00E+00
27GO:0010394: homogalacturonan metabolic process0.00E+00
28GO:0030388: fructose 1,6-bisphosphate metabolic process0.00E+00
29GO:0080114: positive regulation of glycine hydroxymethyltransferase activity0.00E+00
30GO:0042820: vitamin B6 catabolic process0.00E+00
31GO:0099131: ATP hydrolysis coupled ion transmembrane transport0.00E+00
32GO:0032544: plastid translation4.30E-15
33GO:0015979: photosynthesis9.20E-15
34GO:0009658: chloroplast organization5.16E-13
35GO:0010027: thylakoid membrane organization1.91E-12
36GO:0009773: photosynthetic electron transport in photosystem I3.73E-11
37GO:0006412: translation5.24E-08
38GO:0010196: nonphotochemical quenching1.17E-07
39GO:0009735: response to cytokinin2.34E-07
40GO:0010207: photosystem II assembly4.28E-07
41GO:0006633: fatty acid biosynthetic process1.49E-06
42GO:0055114: oxidation-reduction process1.77E-06
43GO:0042254: ribosome biogenesis3.27E-06
44GO:0006094: gluconeogenesis7.70E-06
45GO:0015995: chlorophyll biosynthetic process1.06E-05
46GO:0019253: reductive pentose-phosphate cycle1.07E-05
47GO:0006002: fructose 6-phosphate metabolic process1.82E-05
48GO:0009409: response to cold1.98E-05
49GO:0006546: glycine catabolic process2.05E-05
50GO:0042549: photosystem II stabilization7.44E-05
51GO:0042335: cuticle development1.10E-04
52GO:0018298: protein-chromophore linkage1.23E-04
53GO:0090391: granum assembly1.94E-04
54GO:0006518: peptide metabolic process1.94E-04
55GO:0010025: wax biosynthetic process2.37E-04
56GO:0006096: glycolytic process2.39E-04
57GO:0008610: lipid biosynthetic process2.44E-04
58GO:0071482: cellular response to light stimulus3.26E-04
59GO:0055070: copper ion homeostasis3.78E-04
60GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly3.78E-04
61GO:0009416: response to light stimulus4.51E-04
62GO:1900865: chloroplast RNA modification5.29E-04
63GO:0006810: transport6.07E-04
64GO:0009765: photosynthesis, light harvesting6.14E-04
65GO:0006183: GTP biosynthetic process6.14E-04
66GO:0045727: positive regulation of translation6.14E-04
67GO:0016117: carotenoid biosynthetic process6.84E-04
68GO:0010236: plastoquinone biosynthetic process9.01E-04
69GO:0045038: protein import into chloroplast thylakoid membrane9.01E-04
70GO:0031365: N-terminal protein amino acid modification9.01E-04
71GO:0016120: carotene biosynthetic process9.01E-04
72GO:0032543: mitochondrial translation9.01E-04
73GO:0005986: sucrose biosynthetic process1.11E-03
74GO:0009767: photosynthetic electron transport chain1.11E-03
75GO:0016554: cytidine to uridine editing1.24E-03
76GO:0010190: cytochrome b6f complex assembly1.24E-03
77GO:0006086: acetyl-CoA biosynthetic process from pyruvate1.24E-03
78GO:0010442: guard cell morphogenesis1.29E-03
79GO:0060627: regulation of vesicle-mediated transport1.29E-03
80GO:0006723: cuticle hydrocarbon biosynthetic process1.29E-03
81GO:0000481: maturation of 5S rRNA1.29E-03
82GO:0033481: galacturonate biosynthetic process1.29E-03
83GO:0015969: guanosine tetraphosphate metabolic process1.29E-03
84GO:0043686: co-translational protein modification1.29E-03
85GO:0043609: regulation of carbon utilization1.29E-03
86GO:0045488: pectin metabolic process1.29E-03
87GO:0051180: vitamin transport1.29E-03
88GO:0009443: pyridoxal 5'-phosphate salvage1.29E-03
89GO:1902458: positive regulation of stomatal opening1.29E-03
90GO:0034337: RNA folding1.29E-03
91GO:0070509: calcium ion import1.29E-03
92GO:0007263: nitric oxide mediated signal transduction1.29E-03
93GO:0030974: thiamine pyrophosphate transport1.29E-03
94GO:0043489: RNA stabilization1.29E-03
95GO:0080065: 4-alpha-methyl-delta7-sterol oxidation1.29E-03
96GO:0071588: hydrogen peroxide mediated signaling pathway1.29E-03
97GO:0071277: cellular response to calcium ion1.29E-03
98GO:0046166: glyceraldehyde-3-phosphate biosynthetic process1.29E-03
99GO:0010020: chloroplast fission1.30E-03
100GO:0042372: phylloquinone biosynthetic process1.64E-03
101GO:0042026: protein refolding1.64E-03
102GO:1901259: chloroplast rRNA processing1.64E-03
103GO:0006636: unsaturated fatty acid biosynthetic process1.75E-03
104GO:0007017: microtubule-based process2.28E-03
105GO:0061077: chaperone-mediated protein folding2.58E-03
106GO:0031408: oxylipin biosynthetic process2.58E-03
107GO:0048564: photosystem I assembly2.65E-03
108GO:0009704: de-etiolation2.65E-03
109GO:0052541: plant-type cell wall cellulose metabolic process2.87E-03
110GO:0009662: etioplast organization2.87E-03
111GO:0097054: L-glutamate biosynthetic process2.87E-03
112GO:1904143: positive regulation of carotenoid biosynthetic process2.87E-03
113GO:0080183: response to photooxidative stress2.87E-03
114GO:0043255: regulation of carbohydrate biosynthetic process2.87E-03
115GO:0080005: photosystem stoichiometry adjustment2.87E-03
116GO:0010115: regulation of abscisic acid biosynthetic process2.87E-03
117GO:0006729: tetrahydrobiopterin biosynthetic process2.87E-03
118GO:1903426: regulation of reactive oxygen species biosynthetic process2.87E-03
119GO:0015893: drug transport2.87E-03
120GO:0034755: iron ion transmembrane transport2.87E-03
121GO:0010270: photosystem II oxygen evolving complex assembly2.87E-03
122GO:0045454: cell redox homeostasis2.89E-03
123GO:0009657: plastid organization3.24E-03
124GO:0000902: cell morphogenesis3.91E-03
125GO:0000413: protein peptidyl-prolyl isomerization4.47E-03
126GO:0010205: photoinhibition4.64E-03
127GO:0009853: photorespiration4.70E-03
128GO:0000913: preprophase band assembly4.78E-03
129GO:0051604: protein maturation4.78E-03
130GO:0071492: cellular response to UV-A4.78E-03
131GO:0006696: ergosterol biosynthetic process4.78E-03
132GO:0030865: cortical cytoskeleton organization4.78E-03
133GO:2001295: malonyl-CoA biosynthetic process4.78E-03
134GO:0043447: alkane biosynthetic process4.78E-03
135GO:0010581: regulation of starch biosynthetic process4.78E-03
136GO:0006954: inflammatory response4.78E-03
137GO:0032504: multicellular organism reproduction4.78E-03
138GO:0019563: glycerol catabolic process4.78E-03
139GO:0090506: axillary shoot meristem initiation4.78E-03
140GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition4.78E-03
141GO:0045036: protein targeting to chloroplast5.45E-03
142GO:0006457: protein folding6.15E-03
143GO:0000038: very long-chain fatty acid metabolic process6.32E-03
144GO:0006352: DNA-templated transcription, initiation6.32E-03
145GO:0009750: response to fructose6.32E-03
146GO:0018119: peptidyl-cysteine S-nitrosylation6.32E-03
147GO:0006816: calcium ion transport6.32E-03
148GO:0009073: aromatic amino acid family biosynthetic process6.32E-03
149GO:0043085: positive regulation of catalytic activity6.32E-03
150GO:0016132: brassinosteroid biosynthetic process6.48E-03
151GO:0051085: chaperone mediated protein folding requiring cofactor7.00E-03
152GO:0051639: actin filament network formation7.00E-03
153GO:0009152: purine ribonucleotide biosynthetic process7.00E-03
154GO:0046653: tetrahydrofolate metabolic process7.00E-03
155GO:0043572: plastid fission7.00E-03
156GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis7.00E-03
157GO:2001141: regulation of RNA biosynthetic process7.00E-03
158GO:0006241: CTP biosynthetic process7.00E-03
159GO:0019048: modulation by virus of host morphology or physiology7.00E-03
160GO:0006537: glutamate biosynthetic process7.00E-03
161GO:0009800: cinnamic acid biosynthetic process7.00E-03
162GO:0051016: barbed-end actin filament capping7.00E-03
163GO:0006165: nucleoside diphosphate phosphorylation7.00E-03
164GO:0006228: UTP biosynthetic process7.00E-03
165GO:0031048: chromatin silencing by small RNA7.00E-03
166GO:0010731: protein glutathionylation7.00E-03
167GO:0006424: glutamyl-tRNA aminoacylation7.00E-03
168GO:0007231: osmosensory signaling pathway7.00E-03
169GO:0010088: phloem development7.00E-03
170GO:1901332: negative regulation of lateral root development7.00E-03
171GO:0016556: mRNA modification7.00E-03
172GO:0032502: developmental process7.06E-03
173GO:0045037: protein import into chloroplast stroma7.27E-03
174GO:0006006: glucose metabolic process8.29E-03
175GO:0030036: actin cytoskeleton organization8.29E-03
176GO:0071555: cell wall organization9.30E-03
177GO:0010143: cutin biosynthetic process9.39E-03
178GO:0051764: actin crosslink formation9.52E-03
179GO:0071483: cellular response to blue light9.52E-03
180GO:0019464: glycine decarboxylation via glycine cleavage system9.52E-03
181GO:0006085: acetyl-CoA biosynthetic process9.52E-03
182GO:0010037: response to carbon dioxide9.52E-03
183GO:0015994: chlorophyll metabolic process9.52E-03
184GO:0006808: regulation of nitrogen utilization9.52E-03
185GO:2000122: negative regulation of stomatal complex development9.52E-03
186GO:0033500: carbohydrate homeostasis9.52E-03
187GO:0031122: cytoplasmic microtubule organization9.52E-03
188GO:0019676: ammonia assimilation cycle9.52E-03
189GO:0015976: carbon utilization9.52E-03
190GO:0051567: histone H3-K9 methylation9.52E-03
191GO:0044206: UMP salvage9.52E-03
192GO:0071486: cellular response to high light intensity9.52E-03
193GO:0016126: sterol biosynthetic process1.05E-02
194GO:0090351: seedling development1.06E-02
195GO:0006364: rRNA processing1.10E-02
196GO:0006564: L-serine biosynthetic process1.23E-02
197GO:0000304: response to singlet oxygen1.23E-02
198GO:0035434: copper ion transmembrane transport1.23E-02
199GO:0006461: protein complex assembly1.23E-02
200GO:0009107: lipoate biosynthetic process1.23E-02
201GO:0016123: xanthophyll biosynthetic process1.23E-02
202GO:0006656: phosphatidylcholine biosynthetic process1.23E-02
203GO:0043097: pyrimidine nucleoside salvage1.23E-02
204GO:0019344: cysteine biosynthetic process1.31E-02
205GO:0009793: embryo development ending in seed dormancy1.33E-02
206GO:0055085: transmembrane transport1.37E-02
207GO:0009768: photosynthesis, light harvesting in photosystem I1.45E-02
208GO:0006418: tRNA aminoacylation for protein translation1.45E-02
209GO:0009817: defense response to fungus, incompatible interaction1.47E-02
210GO:0000470: maturation of LSU-rRNA1.54E-02
211GO:0006555: methionine metabolic process1.54E-02
212GO:0016458: gene silencing1.54E-02
213GO:0006014: D-ribose metabolic process1.54E-02
214GO:0006561: proline biosynthetic process1.54E-02
215GO:0010358: leaf shaping1.54E-02
216GO:0048759: xylem vessel member cell differentiation1.54E-02
217GO:0010405: arabinogalactan protein metabolic process1.54E-02
218GO:0009913: epidermal cell differentiation1.54E-02
219GO:0048827: phyllome development1.54E-02
220GO:0006828: manganese ion transport1.54E-02
221GO:0006559: L-phenylalanine catabolic process1.54E-02
222GO:0006206: pyrimidine nucleobase metabolic process1.54E-02
223GO:0032973: amino acid export1.54E-02
224GO:0018258: protein O-linked glycosylation via hydroxyproline1.54E-02
225GO:0010337: regulation of salicylic acid metabolic process1.54E-02
226GO:0006596: polyamine biosynthetic process1.54E-02
227GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway1.54E-02
228GO:0080092: regulation of pollen tube growth1.76E-02
229GO:0006730: one-carbon metabolic process1.76E-02
230GO:0006694: steroid biosynthetic process1.86E-02
231GO:0009955: adaxial/abaxial pattern specification1.86E-02
232GO:0030488: tRNA methylation1.86E-02
233GO:0010189: vitamin E biosynthetic process1.86E-02
234GO:0009854: oxidative photosynthetic carbon pathway1.86E-02
235GO:0010019: chloroplast-nucleus signaling pathway1.86E-02
236GO:0010555: response to mannitol1.86E-02
237GO:0010067: procambium histogenesis1.86E-02
238GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)1.86E-02
239GO:0006458: 'de novo' protein folding1.86E-02
240GO:0017148: negative regulation of translation1.86E-02
241GO:0009411: response to UV1.92E-02
242GO:0042742: defense response to bacterium2.01E-02
243GO:0009306: protein secretion2.09E-02
244GO:0019722: calcium-mediated signaling2.09E-02
245GO:0009772: photosynthetic electron transport in photosystem II2.22E-02
246GO:0043090: amino acid import2.22E-02
247GO:0006400: tRNA modification2.22E-02
248GO:0051693: actin filament capping2.22E-02
249GO:0030497: fatty acid elongation2.22E-02
250GO:0006614: SRP-dependent cotranslational protein targeting to membrane2.22E-02
251GO:0006401: RNA catabolic process2.22E-02
252GO:0050829: defense response to Gram-negative bacterium2.22E-02
253GO:0009645: response to low light intensity stimulus2.22E-02
254GO:0009395: phospholipid catabolic process2.22E-02
255GO:0010087: phloem or xylem histogenesis2.46E-02
256GO:0006605: protein targeting2.59E-02
257GO:0007155: cell adhesion2.59E-02
258GO:0032508: DNA duplex unwinding2.59E-02
259GO:2000070: regulation of response to water deprivation2.59E-02
260GO:0045010: actin nucleation2.59E-02
261GO:0010492: maintenance of shoot apical meristem identity2.59E-02
262GO:0009819: drought recovery2.59E-02
263GO:0009642: response to light intensity2.59E-02
264GO:0030091: protein repair2.59E-02
265GO:0042255: ribosome assembly2.59E-02
266GO:0006353: DNA-templated transcription, termination2.59E-02
267GO:0006869: lipid transport2.64E-02
268GO:0010182: sugar mediated signaling pathway2.65E-02
269GO:0009741: response to brassinosteroid2.65E-02
270GO:0009826: unidimensional cell growth2.77E-02
271GO:0015996: chlorophyll catabolic process2.98E-02
272GO:0006075: (1->3)-beta-D-glucan biosynthetic process2.98E-02
273GO:0017004: cytochrome complex assembly2.98E-02
274GO:0019430: removal of superoxide radicals2.98E-02
275GO:0007186: G-protein coupled receptor signaling pathway2.98E-02
276GO:0009808: lignin metabolic process2.98E-02
277GO:0009644: response to high light intensity3.04E-02
278GO:0019252: starch biosynthetic process3.06E-02
279GO:0046686: response to cadmium ion3.13E-02
280GO:0006629: lipid metabolic process3.28E-02
281GO:0009051: pentose-phosphate shunt, oxidative branch3.39E-02
282GO:0000373: Group II intron splicing3.39E-02
283GO:0006098: pentose-phosphate shunt3.39E-02
284GO:0090305: nucleic acid phosphodiester bond hydrolysis3.39E-02
285GO:0010206: photosystem II repair3.39E-02
286GO:0080144: amino acid homeostasis3.39E-02
287GO:0048507: meristem development3.39E-02
288GO:0090333: regulation of stomatal closure3.39E-02
289GO:0042538: hyperosmotic salinity response3.66E-02
290GO:0010090: trichome morphogenesis3.73E-02
291GO:0006779: porphyrin-containing compound biosynthetic process3.82E-02
292GO:0035999: tetrahydrofolate interconversion3.82E-02
293GO:0042761: very long-chain fatty acid biosynthetic process3.82E-02
294GO:0010380: regulation of chlorophyll biosynthetic process3.82E-02
295GO:0007267: cell-cell signaling4.22E-02
296GO:0080167: response to karrikin4.22E-02
297GO:0006032: chitin catabolic process4.27E-02
298GO:0009688: abscisic acid biosynthetic process4.27E-02
299GO:0030422: production of siRNA involved in RNA interference4.27E-02
300GO:0043069: negative regulation of programmed cell death4.27E-02
301GO:0048829: root cap development4.27E-02
302GO:0006782: protoporphyrinogen IX biosynthetic process4.27E-02
303GO:0019538: protein metabolic process4.27E-02
304GO:0009870: defense response signaling pathway, resistance gene-dependent4.27E-02
305GO:0006535: cysteine biosynthetic process from serine4.27E-02
306GO:0006879: cellular iron ion homeostasis4.73E-02
307GO:0000272: polysaccharide catabolic process4.73E-02
308GO:0019684: photosynthesis, light reaction4.73E-02
309GO:0009089: lysine biosynthetic process via diaminopimelate4.73E-02
310GO:0006415: translational termination4.73E-02
RankGO TermAdjusted P value
1GO:0005222: intracellular cAMP activated cation channel activity0.00E+00
2GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives0.00E+00
3GO:0004823: leucine-tRNA ligase activity0.00E+00
4GO:0008756: o-succinylbenzoate-CoA ligase activity0.00E+00
5GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity0.00E+00
6GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity0.00E+00
7GO:0008859: exoribonuclease II activity0.00E+00
8GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity0.00E+00
9GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity0.00E+00
10GO:0050236: pyridoxine:NADP 4-dehydrogenase activity0.00E+00
11GO:0046408: chlorophyll synthetase activity0.00E+00
12GO:0016631: enoyl-[acyl-carrier-protein] reductase activity0.00E+00
13GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity0.00E+00
14GO:0004852: uroporphyrinogen-III synthase activity0.00E+00
15GO:0008942: nitrite reductase [NAD(P)H] activity0.00E+00
16GO:0019146: arabinose-5-phosphate isomerase activity0.00E+00
17GO:0010301: xanthoxin dehydrogenase activity0.00E+00
18GO:0051721: protein phosphatase 2A binding0.00E+00
19GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity0.00E+00
20GO:0052667: phosphomethylethanolamine N-methyltransferase activity0.00E+00
21GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity0.00E+00
22GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity0.00E+00
23GO:0036361: racemase activity, acting on amino acids and derivatives0.00E+00
24GO:0042903: tubulin deacetylase activity0.00E+00
25GO:0008887: glycerate kinase activity0.00E+00
26GO:0051738: xanthophyll binding0.00E+00
27GO:0010487: thermospermine synthase activity0.00E+00
28GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity0.00E+00
29GO:0045435: lycopene epsilon cyclase activity0.00E+00
30GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity0.00E+00
31GO:0050613: delta14-sterol reductase activity0.00E+00
32GO:0046028: electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity0.00E+00
33GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity0.00E+00
34GO:0004822: isoleucine-tRNA ligase activity0.00E+00
35GO:0102550: 2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity0.00E+00
36GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity0.00E+00
37GO:0003873: 6-phosphofructo-2-kinase activity0.00E+00
38GO:0005048: signal sequence binding0.00E+00
39GO:0046608: carotenoid isomerase activity0.00E+00
40GO:0050278: sedoheptulose-bisphosphatase activity0.00E+00
41GO:0090471: 9,15,9'-tri-cis-zeta-carotene isomerase activity0.00E+00
42GO:0050614: delta24-sterol reductase activity0.00E+00
43GO:0043014: alpha-tubulin binding0.00E+00
44GO:0009974: zeinoxanthin epsilon hydroxylase activity0.00E+00
45GO:0046905: phytoene synthase activity0.00E+00
46GO:0019843: rRNA binding8.54E-23
47GO:0003755: peptidyl-prolyl cis-trans isomerase activity3.96E-11
48GO:0005528: FK506 binding1.43E-09
49GO:0003735: structural constituent of ribosome6.32E-09
50GO:0016168: chlorophyll binding7.35E-06
51GO:0004033: aldo-keto reductase (NADP) activity1.14E-05
52GO:0016491: oxidoreductase activity1.66E-05
53GO:0022891: substrate-specific transmembrane transporter activity6.32E-05
54GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity6.47E-05
55GO:0051920: peroxiredoxin activity1.19E-04
56GO:0002161: aminoacyl-tRNA editing activity1.94E-04
57GO:0004148: dihydrolipoyl dehydrogenase activity1.94E-04
58GO:0016209: antioxidant activity2.44E-04
59GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity6.14E-04
60GO:0016987: sigma factor activity6.14E-04
61GO:0004659: prenyltransferase activity6.14E-04
62GO:0001053: plastid sigma factor activity6.14E-04
63GO:0043495: protein anchor6.14E-04
64GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor6.14E-04
65GO:0004565: beta-galactosidase activity1.11E-03
66GO:0031072: heat shock protein binding1.11E-03
67GO:0004489: methylenetetrahydrofolate reductase (NAD(P)H) activity1.29E-03
68GO:0005080: protein kinase C binding1.29E-03
69GO:0016768: spermine synthase activity1.29E-03
70GO:0090422: thiamine pyrophosphate transporter activity1.29E-03
71GO:0004807: triose-phosphate isomerase activity1.29E-03
72GO:0016041: glutamate synthase (ferredoxin) activity1.29E-03
73GO:0030941: chloroplast targeting sequence binding1.29E-03
74GO:0080132: fatty acid alpha-hydroxylase activity1.29E-03
75GO:0005221: intracellular cyclic nucleotide activated cation channel activity1.29E-03
76GO:0000248: C-5 sterol desaturase activity1.29E-03
77GO:0009496: plastoquinol--plastocyanin reductase activity1.29E-03
78GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity1.29E-03
79GO:0010012: steroid 22-alpha hydroxylase activity1.29E-03
80GO:0003867: 4-aminobutyrate transaminase activity1.29E-03
81GO:0008568: microtubule-severing ATPase activity1.29E-03
82GO:0042586: peptide deformylase activity1.29E-03
83GO:0004321: fatty-acyl-CoA synthase activity1.29E-03
84GO:0051996: squalene synthase activity1.29E-03
85GO:0047381: dodecanoyl-[acyl-carrier-protein] hydrolase activity1.29E-03
86GO:0045485: omega-6 fatty acid desaturase activity1.29E-03
87GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity1.29E-03
88GO:0047259: glucomannan 4-beta-mannosyltransferase activity1.29E-03
89GO:0046912: transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer1.29E-03
90GO:0008266: poly(U) RNA binding1.30E-03
91GO:0051082: unfolded protein binding1.45E-03
92GO:0019899: enzyme binding2.11E-03
93GO:0008967: phosphoglycolate phosphatase activity2.87E-03
94GO:0008728: GTP diphosphokinase activity2.87E-03
95GO:0004310: farnesyl-diphosphate farnesyltransferase activity2.87E-03
96GO:0000234: phosphoethanolamine N-methyltransferase activity2.87E-03
97GO:0050017: L-3-cyanoalanine synthase activity2.87E-03
98GO:0047746: chlorophyllase activity2.87E-03
99GO:0042389: omega-3 fatty acid desaturase activity2.87E-03
100GO:0008805: carbon-monoxide oxygenase activity2.87E-03
101GO:0016630: protochlorophyllide reductase activity2.87E-03
102GO:0004618: phosphoglycerate kinase activity2.87E-03
103GO:0010297: heteropolysaccharide binding2.87E-03
104GO:0004326: tetrahydrofolylpolyglutamate synthase activity2.87E-03
105GO:0004617: phosphoglycerate dehydrogenase activity2.87E-03
106GO:0003938: IMP dehydrogenase activity2.87E-03
107GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity2.87E-03
108GO:0004802: transketolase activity2.87E-03
109GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase2.87E-03
110GO:0004047: aminomethyltransferase activity2.87E-03
111GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water3.24E-03
112GO:0004222: metalloendopeptidase activity3.78E-03
113GO:0004075: biotin carboxylase activity4.78E-03
114GO:0003924: GTPase activity4.78E-03
115GO:0030267: glyoxylate reductase (NADP) activity4.78E-03
116GO:0016531: copper chaperone activity4.78E-03
117GO:0070330: aromatase activity4.78E-03
118GO:0016742: hydroxymethyl-, formyl- and related transferase activity4.78E-03
119GO:0019829: cation-transporting ATPase activity4.78E-03
120GO:0017150: tRNA dihydrouridine synthase activity4.78E-03
121GO:0050734: hydroxycinnamoyltransferase activity4.78E-03
122GO:0070402: NADPH binding4.78E-03
123GO:0016992: lipoate synthase activity4.78E-03
124GO:0045548: phenylalanine ammonia-lyase activity4.78E-03
125GO:0003913: DNA photolyase activity4.78E-03
126GO:0045158: electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity4.78E-03
127GO:0008864: formyltetrahydrofolate deformylase activity4.78E-03
128GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor4.78E-03
129GO:0016296: palmitoyl-[acyl-carrier-protein] hydrolase activity4.78E-03
130GO:0016295: myristoyl-[acyl-carrier-protein] hydrolase activity4.78E-03
131GO:0005525: GTP binding5.13E-03
132GO:0050662: coenzyme binding5.41E-03
133GO:0008047: enzyme activator activity5.45E-03
134GO:0005089: Rho guanyl-nucleotide exchange factor activity6.32E-03
135GO:0044183: protein binding involved in protein folding6.32E-03
136GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity7.00E-03
137GO:0003878: ATP citrate synthase activity7.00E-03
138GO:0000254: C-4 methylsterol oxidase activity7.00E-03
139GO:0004375: glycine dehydrogenase (decarboxylating) activity7.00E-03
140GO:0004550: nucleoside diphosphate kinase activity7.00E-03
141GO:0043023: ribosomal large subunit binding7.00E-03
142GO:0008097: 5S rRNA binding7.00E-03
143GO:0008508: bile acid:sodium symporter activity7.00E-03
144GO:0048487: beta-tubulin binding7.00E-03
145GO:0001872: (1->3)-beta-D-glucan binding7.00E-03
146GO:0035197: siRNA binding7.00E-03
147GO:0016149: translation release factor activity, codon specific7.00E-03
148GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor7.00E-03
149GO:0016851: magnesium chelatase activity7.00E-03
150GO:0005509: calcium ion binding7.40E-03
151GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor7.67E-03
152GO:0005262: calcium channel activity8.29E-03
153GO:0004022: alcohol dehydrogenase (NAD) activity8.29E-03
154GO:0005200: structural constituent of cytoskeleton8.99E-03
155GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed9.52E-03
156GO:0004045: aminoacyl-tRNA hydrolase activity9.52E-03
157GO:0010328: auxin influx transmembrane transporter activity9.52E-03
158GO:1990137: plant seed peroxidase activity9.52E-03
159GO:0052793: pectin acetylesterase activity9.52E-03
160GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity9.52E-03
161GO:0004845: uracil phosphoribosyltransferase activity9.52E-03
162GO:0004345: glucose-6-phosphate dehydrogenase activity9.52E-03
163GO:0016836: hydro-lyase activity9.52E-03
164GO:0051861: glycolipid binding9.52E-03
165GO:0050378: UDP-glucuronate 4-epimerase activity9.52E-03
166GO:0003723: RNA binding1.01E-02
167GO:0102337: 3-oxo-cerotoyl-CoA synthase activity1.18E-02
168GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity1.18E-02
169GO:0102336: 3-oxo-arachidoyl-CoA synthase activity1.18E-02
170GO:0031409: pigment binding1.18E-02
171GO:0003824: catalytic activity1.21E-02
172GO:0008374: O-acyltransferase activity1.23E-02
173GO:0009922: fatty acid elongase activity1.23E-02
174GO:0051538: 3 iron, 4 sulfur cluster binding1.23E-02
175GO:0003959: NADPH dehydrogenase activity1.23E-02
176GO:0003989: acetyl-CoA carboxylase activity1.23E-02
177GO:0016773: phosphotransferase activity, alcohol group as acceptor1.23E-02
178GO:0004040: amidase activity1.23E-02
179GO:0018685: alkane 1-monooxygenase activity1.23E-02
180GO:0051536: iron-sulfur cluster binding1.31E-02
181GO:0015079: potassium ion transmembrane transporter activity1.45E-02
182GO:0004332: fructose-bisphosphate aldolase activity1.54E-02
183GO:0016688: L-ascorbate peroxidase activity1.54E-02
184GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity1.54E-02
185GO:0008200: ion channel inhibitor activity1.54E-02
186GO:0004130: cytochrome-c peroxidase activity1.54E-02
187GO:2001070: starch binding1.54E-02
188GO:0016208: AMP binding1.54E-02
189GO:0042578: phosphoric ester hydrolase activity1.54E-02
190GO:1990714: hydroxyproline O-galactosyltransferase activity1.54E-02
191GO:0004176: ATP-dependent peptidase activity1.60E-02
192GO:0004723: calcium-dependent protein serine/threonine phosphatase activity1.86E-02
193GO:0033743: peptide-methionine (R)-S-oxide reductase activity1.86E-02
194GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity1.86E-02
195GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity1.86E-02
196GO:0005242: inward rectifier potassium channel activity1.86E-02
197GO:0051753: mannan synthase activity1.86E-02
198GO:0004849: uridine kinase activity1.86E-02
199GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity1.86E-02
200GO:0004747: ribokinase activity1.86E-02
201GO:0005261: cation channel activity1.86E-02
202GO:0004124: cysteine synthase activity1.86E-02
203GO:0008235: metalloexopeptidase activity2.22E-02
204GO:0004620: phospholipase activity2.22E-02
205GO:0009881: photoreceptor activity2.22E-02
206GO:0004812: aminoacyl-tRNA ligase activity2.27E-02
207GO:0004871: signal transducer activity2.42E-02
208GO:0043022: ribosome binding2.59E-02
209GO:0008312: 7S RNA binding2.59E-02
210GO:0052747: sinapyl alcohol dehydrogenase activity2.59E-02
211GO:0008865: fructokinase activity2.59E-02
212GO:0005215: transporter activity2.60E-02
213GO:0046872: metal ion binding2.75E-02
214GO:0004791: thioredoxin-disulfide reductase activity2.85E-02
215GO:0004601: peroxidase activity2.96E-02
216GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)2.98E-02
217GO:0015078: hydrogen ion transmembrane transporter activity2.98E-02
218GO:0005375: copper ion transmembrane transporter activity2.98E-02
219GO:0003843: 1,3-beta-D-glucan synthase activity2.98E-02
220GO:0051537: 2 iron, 2 sulfur cluster binding3.04E-02
221GO:0016788: hydrolase activity, acting on ester bonds3.05E-02
222GO:0048038: quinone binding3.28E-02
223GO:0016207: 4-coumarate-CoA ligase activity3.39E-02
224GO:0008889: glycerophosphodiester phosphodiesterase activity3.39E-02
225GO:0003747: translation release factor activity3.39E-02
226GO:0000156: phosphorelay response regulator activity3.73E-02
227GO:0051015: actin filament binding3.73E-02
228GO:0047617: acyl-CoA hydrolase activity3.82E-02
229GO:0005381: iron ion transmembrane transporter activity3.82E-02
230GO:0005384: manganese ion transmembrane transporter activity3.82E-02
231GO:0016787: hydrolase activity3.85E-02
232GO:0008237: metallopeptidase activity4.22E-02
233GO:0030234: enzyme regulator activity4.27E-02
234GO:0004568: chitinase activity4.27E-02
235GO:0005515: protein binding4.28E-02
236GO:0004177: aminopeptidase activity4.73E-02
237GO:0015386: potassium:proton antiporter activity4.73E-02
238GO:0047372: acylglycerol lipase activity4.73E-02
239GO:0052689: carboxylic ester hydrolase activity4.96E-02
RankGO TermAdjusted P value
1GO:0009515: granal stacked thylakoid0.00E+00
2GO:0005835: fatty acid synthase complex0.00E+00
3GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex0.00E+00
4GO:0009575: chromoplast stroma0.00E+00
5GO:0009571: proplastid stroma0.00E+00
6GO:0009507: chloroplast1.37E-128
7GO:0009941: chloroplast envelope1.56E-68
8GO:0009570: chloroplast stroma1.65E-68
9GO:0009535: chloroplast thylakoid membrane8.33E-66
10GO:0009579: thylakoid4.23E-43
11GO:0009534: chloroplast thylakoid3.17E-34
12GO:0009543: chloroplast thylakoid lumen4.04E-30
13GO:0031977: thylakoid lumen2.21E-20
14GO:0005840: ribosome6.13E-12
15GO:0031969: chloroplast membrane3.65E-11
16GO:0009654: photosystem II oxygen evolving complex5.97E-11
17GO:0048046: apoplast1.73E-10
18GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)2.41E-10
19GO:0019898: extrinsic component of membrane6.54E-08
20GO:0009523: photosystem II1.26E-06
21GO:0042651: thylakoid membrane1.86E-06
22GO:0010319: stromule4.04E-06
23GO:0030095: chloroplast photosystem II1.07E-05
24GO:0016021: integral component of membrane2.60E-05
25GO:0016020: membrane4.97E-05
26GO:0010287: plastoglobule1.32E-04
27GO:0009706: chloroplast inner membrane3.76E-04
28GO:0045298: tubulin complex4.20E-04
29GO:0009536: plastid7.02E-04
30GO:0046658: anchored component of plasma membrane7.61E-04
31GO:0055035: plastid thylakoid membrane9.01E-04
32GO:0000311: plastid large ribosomal subunit9.43E-04
33GO:0009344: nitrite reductase complex [NAD(P)H]1.29E-03
34GO:0009782: photosystem I antenna complex1.29E-03
35GO:0009547: plastid ribosome1.29E-03
36GO:0009533: chloroplast stromal thylakoid2.11E-03
37GO:0030529: intracellular ribonucleoprotein complex2.14E-03
38GO:0009532: plastid stroma2.58E-03
39GO:0042170: plastid membrane2.87E-03
40GO:0030981: cortical microtubule cytoskeleton2.87E-03
41GO:0080085: signal recognition particle, chloroplast targeting2.87E-03
42GO:0008290: F-actin capping protein complex2.87E-03
43GO:0000427: plastid-encoded plastid RNA polymerase complex2.87E-03
44GO:0015934: large ribosomal subunit4.07E-03
45GO:0009528: plastid inner membrane4.78E-03
46GO:0010007: magnesium chelatase complex4.78E-03
47GO:0005884: actin filament6.32E-03
48GO:0022626: cytosolic ribosome6.76E-03
49GO:0005719: nuclear euchromatin7.00E-03
50GO:0032432: actin filament bundle7.00E-03
51GO:0015630: microtubule cytoskeleton7.00E-03
52GO:0005960: glycine cleavage complex7.00E-03
53GO:0009346: citrate lyase complex7.00E-03
54GO:0009505: plant-type cell wall8.27E-03
55GO:0000312: plastid small ribosomal subunit9.39E-03
56GO:0009517: PSII associated light-harvesting complex II9.52E-03
57GO:0009526: plastid envelope9.52E-03
58GO:0009527: plastid outer membrane9.52E-03
59GO:0030076: light-harvesting complex1.06E-02
60GO:0005759: mitochondrial matrix1.19E-02
61GO:0000178: exosome (RNase complex)1.23E-02
62GO:0009512: cytochrome b6f complex1.23E-02
63GO:0045263: proton-transporting ATP synthase complex, coupling factor F(o)1.54E-02
64GO:0031209: SCAR complex1.54E-02
65GO:0015935: small ribosomal subunit1.60E-02
66GO:0031359: integral component of chloroplast outer membrane2.22E-02
67GO:0031225: anchored component of membrane2.27E-02
68GO:0005786: signal recognition particle, endoplasmic reticulum targeting2.98E-02
69GO:0005811: lipid particle2.98E-02
70GO:0000148: 1,3-beta-D-glucan synthase complex2.98E-02
71GO:0009539: photosystem II reaction center2.98E-02
72GO:0005763: mitochondrial small ribosomal subunit3.39E-02
73GO:0015030: Cajal body3.82E-02
74GO:0005618: cell wall3.95E-02
75GO:0005874: microtubule3.99E-02
76GO:0005886: plasma membrane4.13E-02
77GO:0005778: peroxisomal membrane4.22E-02
78GO:0016324: apical plasma membrane4.27E-02
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Gene type



Gene DE type