co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G10290

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006858: extracellular transport	0.00E+00
2	GO:1900367: positive regulation of defense response to insect	0.00E+00
3	GO:0046109: uridine biosynthetic process	0.00E+00
4	GO:0071327: cellular response to trehalose stimulus	0.00E+00
5	GO:0080142: regulation of salicylic acid biosynthetic process	7.97E-06
6	GO:0006422: aspartyl-tRNA aminoacylation	9.33E-05
7	GO:1990022: RNA polymerase III complex localization to nucleus	9.33E-05
8	GO:0033306: phytol metabolic process	9.33E-05
9	GO:1901183: positive regulation of camalexin biosynthetic process	9.33E-05
10	GO:0044376: RNA polymerase II complex import to nucleus	9.33E-05
11	GO:0051245: negative regulation of cellular defense response	9.33E-05
12	GO:0048354: mucilage biosynthetic process involved in seed coat development	9.72E-05
13	GO:1900426: positive regulation of defense response to bacterium	9.72E-05
14	GO:0051707: response to other organism	2.00E-04
15	GO:0019374: galactolipid metabolic process	2.20E-04
16	GO:1901703: protein localization involved in auxin polar transport	2.20E-04
17	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	2.20E-04
18	GO:0042814: monopolar cell growth	2.20E-04
19	GO:0006996: organelle organization	2.20E-04
20	GO:0002221: pattern recognition receptor signaling pathway	2.20E-04
21	GO:0015914: phospholipid transport	2.20E-04
22	GO:2000072: regulation of defense response to fungus, incompatible interaction	2.20E-04
23	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	2.20E-04
24	GO:0010618: aerenchyma formation	2.20E-04
25	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	3.67E-04
26	GO:0002230: positive regulation of defense response to virus by host	3.67E-04
27	GO:2000034: regulation of seed maturation	3.67E-04
28	GO:0009052: pentose-phosphate shunt, non-oxidative branch	5.28E-04
29	GO:0033014: tetrapyrrole biosynthetic process	5.28E-04
30	GO:0006612: protein targeting to membrane	5.28E-04
31	GO:1902290: positive regulation of defense response to oomycetes	5.28E-04
32	GO:0001676: long-chain fatty acid metabolic process	5.28E-04
33	GO:0048194: Golgi vesicle budding	5.28E-04
34	GO:0016042: lipid catabolic process	5.63E-04
35	GO:0061025: membrane fusion	6.22E-04
36	GO:0010363: regulation of plant-type hypersensitive response	7.02E-04
37	GO:0000919: cell plate assembly	7.02E-04
38	GO:0030041: actin filament polymerization	8.88E-04
39	GO:0010225: response to UV-C	8.88E-04
40	GO:0009816: defense response to bacterium, incompatible interaction	1.07E-03
41	GO:0018258: protein O-linked glycosylation via hydroxyproline	1.08E-03
42	GO:0060918: auxin transport	1.08E-03
43	GO:0010942: positive regulation of cell death	1.08E-03
44	GO:0010405: arabinogalactan protein metabolic process	1.08E-03
45	GO:0007166: cell surface receptor signaling pathway	1.10E-03
46	GO:0009617: response to bacterium	1.16E-03
47	GO:0006468: protein phosphorylation	1.17E-03
48	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	1.29E-03
49	GO:0000911: cytokinesis by cell plate formation	1.29E-03
50	GO:0009612: response to mechanical stimulus	1.29E-03
51	GO:0010555: response to mannitol	1.29E-03
52	GO:0010310: regulation of hydrogen peroxide metabolic process	1.29E-03
53	GO:2000067: regulation of root morphogenesis	1.29E-03
54	GO:0015031: protein transport	1.37E-03
55	GO:1900056: negative regulation of leaf senescence	1.51E-03
56	GO:1900057: positive regulation of leaf senescence	1.51E-03
57	GO:0009867: jasmonic acid mediated signaling pathway	1.64E-03
58	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	1.75E-03
59	GO:0006644: phospholipid metabolic process	1.75E-03
60	GO:0006631: fatty acid metabolic process	1.94E-03
61	GO:0006887: exocytosis	1.94E-03
62	GO:0007186: G-protein coupled receptor signaling pathway	2.00E-03
63	GO:0006367: transcription initiation from RNA polymerase II promoter	2.00E-03
64	GO:0043562: cellular response to nitrogen levels	2.00E-03
65	GO:2000031: regulation of salicylic acid mediated signaling pathway	2.00E-03
66	GO:0019432: triglyceride biosynthetic process	2.25E-03
67	GO:0051865: protein autoubiquitination	2.25E-03
68	GO:0006783: heme biosynthetic process	2.25E-03
69	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	2.52E-03
70	GO:0008202: steroid metabolic process	2.52E-03
71	GO:0006886: intracellular protein transport	2.75E-03
72	GO:0043069: negative regulation of programmed cell death	2.80E-03
73	GO:0009750: response to fructose	3.09E-03
74	GO:0030148: sphingolipid biosynthetic process	3.09E-03
75	GO:0002213: defense response to insect	3.38E-03
76	GO:0010105: negative regulation of ethylene-activated signaling pathway	3.38E-03
77	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	3.38E-03
78	GO:0006629: lipid metabolic process	3.45E-03
79	GO:0009626: plant-type hypersensitive response	3.54E-03
80	GO:0010102: lateral root morphogenesis	3.69E-03
81	GO:0006807: nitrogen compound metabolic process	3.69E-03
82	GO:0010030: positive regulation of seed germination	4.33E-03
83	GO:0010053: root epidermal cell differentiation	4.33E-03
84	GO:0000027: ribosomal large subunit assembly	5.01E-03
85	GO:0009863: salicylic acid mediated signaling pathway	5.01E-03
86	GO:0010187: negative regulation of seed germination	5.01E-03
87	GO:0009734: auxin-activated signaling pathway	5.32E-03
88	GO:0048278: vesicle docking	5.72E-03
89	GO:0009814: defense response, incompatible interaction	6.09E-03
90	GO:2000022: regulation of jasmonic acid mediated signaling pathway	6.09E-03
91	GO:0031348: negative regulation of defense response	6.09E-03
92	GO:0080092: regulation of pollen tube growth	6.09E-03
93	GO:0006413: translational initiation	6.41E-03
94	GO:0009625: response to insect	6.47E-03
95	GO:0040008: regulation of growth	6.56E-03
96	GO:0009306: protein secretion	6.85E-03
97	GO:0042147: retrograde transport, endosome to Golgi	7.25E-03
98	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	7.69E-03
99	GO:0046686: response to cadmium ion	7.92E-03
100	GO:0010183: pollen tube guidance	8.90E-03
101	GO:0009749: response to glucose	8.90E-03
102	GO:0010193: response to ozone	9.33E-03
103	GO:0006891: intra-Golgi vesicle-mediated transport	9.33E-03
104	GO:0032502: developmental process	9.78E-03
105	GO:0030163: protein catabolic process	1.02E-02
106	GO:0006904: vesicle docking involved in exocytosis	1.11E-02
107	GO:0001666: response to hypoxia	1.21E-02
108	GO:0009737: response to abscisic acid	1.27E-02
109	GO:0006906: vesicle fusion	1.31E-02
110	GO:0009627: systemic acquired resistance	1.31E-02
111	GO:0015995: chlorophyll biosynthetic process	1.36E-02
112	GO:0010200: response to chitin	1.37E-02
113	GO:0016192: vesicle-mediated transport	1.39E-02
114	GO:0046777: protein autophosphorylation	1.42E-02
115	GO:0030244: cellulose biosynthetic process	1.46E-02
116	GO:0016310: phosphorylation	1.57E-02
117	GO:0007568: aging	1.62E-02
118	GO:0045087: innate immune response	1.73E-02
119	GO:0042742: defense response to bacterium	1.75E-02
120	GO:0006099: tricarboxylic acid cycle	1.78E-02
121	GO:0006897: endocytosis	1.95E-02
122	GO:0009408: response to heat	1.96E-02
123	GO:0009744: response to sucrose	2.07E-02
124	GO:0000209: protein polyubiquitination	2.13E-02
125	GO:0009636: response to toxic substance	2.24E-02
126	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	2.37E-02
127	GO:0006486: protein glycosylation	2.55E-02
128	GO:0006417: regulation of translation	2.75E-02
129	GO:0006096: glycolytic process	2.88E-02
130	GO:0009553: embryo sac development	3.21E-02
131	GO:0018105: peptidyl-serine phosphorylation	3.35E-02
132	GO:0009738: abscisic acid-activated signaling pathway	3.36E-02
133	GO:0009058: biosynthetic process	4.00E-02
134	GO:0009790: embryo development	4.30E-02
135	GO:0006633: fatty acid biosynthetic process	4.53E-02
136	GO:0006511: ubiquitin-dependent protein catabolic process	4.69E-02
137	GO:0010150: leaf senescence	4.84E-02

Rank	GO Term	Adjusted P value
1	GO:0051670: inulinase activity	0.00E+00
2	GO:0102391: decanoate--CoA ligase activity	2.87E-05
3	GO:0004467: long-chain fatty acid-CoA ligase activity	3.89E-05
4	GO:0004806: triglyceride lipase activity	8.49E-05
5	GO:0004815: aspartate-tRNA ligase activity	9.33E-05
6	GO:0051669: fructan beta-fructosidase activity	9.33E-05
7	GO:0004325: ferrochelatase activity	9.33E-05
8	GO:0031219: levanase activity	9.33E-05
9	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	9.33E-05
10	GO:0016301: kinase activity	9.82E-05
11	GO:0005524: ATP binding	1.08E-04
12	GO:0050736: O-malonyltransferase activity	2.20E-04
13	GO:0045140: inositol phosphoceramide synthase activity	2.20E-04
14	GO:0043141: ATP-dependent 5'-3' DNA helicase activity	2.20E-04
15	GO:0031683: G-protein beta/gamma-subunit complex binding	3.67E-04
16	GO:0004751: ribose-5-phosphate isomerase activity	3.67E-04
17	GO:0016805: dipeptidase activity	3.67E-04
18	GO:0001664: G-protein coupled receptor binding	3.67E-04
19	GO:0004040: amidase activity	8.88E-04
20	GO:0031593: polyubiquitin binding	1.08E-03
21	GO:0047714: galactolipase activity	1.08E-03
22	GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity	1.08E-03
23	GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity	1.08E-03
24	GO:1990714: hydroxyproline O-galactosyltransferase activity	1.08E-03
25	GO:0004012: phospholipid-translocating ATPase activity	1.29E-03
26	GO:0004144: diacylglycerol O-acyltransferase activity	1.29E-03
27	GO:0004656: procollagen-proline 4-dioxygenase activity	1.29E-03
28	GO:0008320: protein transmembrane transporter activity	1.51E-03
29	GO:0004620: phospholipase activity	1.51E-03
30	GO:0008235: metalloexopeptidase activity	1.51E-03
31	GO:0008312: 7S RNA binding	1.75E-03
32	GO:0004712: protein serine/threonine/tyrosine kinase activity	1.79E-03
33	GO:0008970: phosphatidylcholine 1-acylhydrolase activity	2.00E-03
34	GO:0008142: oxysterol binding	2.00E-03
35	GO:0005484: SNAP receptor activity	2.10E-03
36	GO:0005515: protein binding	2.10E-03
37	GO:0003678: DNA helicase activity	2.25E-03
38	GO:0047617: acyl-CoA hydrolase activity	2.52E-03
39	GO:0030955: potassium ion binding	2.52E-03
40	GO:0004743: pyruvate kinase activity	2.52E-03
41	GO:0004713: protein tyrosine kinase activity	2.80E-03
42	GO:0004177: aminopeptidase activity	3.09E-03
43	GO:0008378: galactosyltransferase activity	3.38E-03
44	GO:0003924: GTPase activity	3.45E-03
45	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	3.69E-03
46	GO:0003712: transcription cofactor activity	4.33E-03
47	GO:0004190: aspartic-type endopeptidase activity	4.33E-03
48	GO:0005528: FK506 binding	5.01E-03
49	GO:0031418: L-ascorbic acid binding	5.01E-03
50	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	6.41E-03
51	GO:0004842: ubiquitin-protein transferase activity	6.61E-03
52	GO:0047134: protein-disulfide reductase activity	7.25E-03
53	GO:0003743: translation initiation factor activity	8.04E-03
54	GO:0001085: RNA polymerase II transcription factor binding	8.06E-03
55	GO:0004791: thioredoxin-disulfide reductase activity	8.47E-03
56	GO:0016740: transferase activity	9.18E-03
57	GO:0030246: carbohydrate binding	1.04E-02
58	GO:0000287: magnesium ion binding	1.05E-02
59	GO:0009931: calcium-dependent protein serine/threonine kinase activity	1.31E-02
60	GO:0004683: calmodulin-dependent protein kinase activity	1.36E-02
61	GO:0061630: ubiquitin protein ligase activity	1.39E-02
62	GO:0004674: protein serine/threonine kinase activity	1.45E-02
63	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	1.46E-02
64	GO:0030145: manganese ion binding	1.62E-02
65	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	1.62E-02
66	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.73E-02
67	GO:0000149: SNARE binding	1.84E-02
68	GO:0003824: catalytic activity	1.96E-02
69	GO:0035091: phosphatidylinositol binding	2.18E-02
70	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	2.31E-02
71	GO:0016298: lipase activity	2.62E-02
72	GO:0022857: transmembrane transporter activity	3.15E-02
73	GO:0003779: actin binding	3.21E-02
74	GO:0051082: unfolded protein binding	3.28E-02
75	GO:0016746: transferase activity, transferring acyl groups	3.35E-02
76	GO:0000166: nucleotide binding	3.47E-02
77	GO:0016758: transferase activity, transferring hexosyl groups	3.78E-02
78	GO:0030170: pyridoxal phosphate binding	4.15E-02
79	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	4.22E-02

Rank	GO Term	Adjusted P value
1	GO:0005674: transcription factor TFIIF complex	0.00E+00
2	GO:0005886: plasma membrane	1.41E-05
3	GO:0005911: cell-cell junction	9.33E-05
4	GO:0045252: oxoglutarate dehydrogenase complex	9.33E-05
5	GO:0030130: clathrin coat of trans-Golgi network vesicle	3.67E-04
6	GO:0030132: clathrin coat of coated pit	3.67E-04
7	GO:0005829: cytosol	4.51E-04
8	GO:0030658: transport vesicle membrane	5.28E-04
9	GO:0070062: extracellular exosome	5.28E-04
10	GO:0009504: cell plate	6.66E-04
11	GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane	1.51E-03
12	GO:0005789: endoplasmic reticulum membrane	1.89E-03
13	GO:0031902: late endosome membrane	1.94E-03
14	GO:0016021: integral component of membrane	2.19E-03
15	GO:0090404: pollen tube tip	3.09E-03
16	GO:0005794: Golgi apparatus	3.21E-03
17	GO:0005834: heterotrimeric G-protein complex	3.54E-03
18	GO:0005737: cytoplasm	3.78E-03
19	GO:0000139: Golgi membrane	6.40E-03
20	GO:0000145: exocyst	9.78E-03
21	GO:0016020: membrane	9.96E-03
22	GO:0032580: Golgi cisterna membrane	1.07E-02
23	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	1.17E-02
24	GO:0005802: trans-Golgi network	1.30E-02
25	GO:0005667: transcription factor complex	1.31E-02
26	GO:0009707: chloroplast outer membrane	1.46E-02
27	GO:0019005: SCF ubiquitin ligase complex	1.46E-02
28	GO:0031201: SNARE complex	1.95E-02
29	GO:0005856: cytoskeleton	2.24E-02
30	GO:0005783: endoplasmic reticulum	2.63E-02
31	GO:0005635: nuclear envelope	2.68E-02
32	GO:0012505: endomembrane system	3.21E-02
33	GO:0010287: plastoglobule	3.71E-02
34	GO:0005654: nucleoplasm	3.78E-02
35	GO:0009543: chloroplast thylakoid lumen	3.85E-02
36	GO:0009524: phragmoplast	4.00E-02