Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G09680

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006858: extracellular transport0.00E+00
2GO:0006990: positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response0.00E+00
3GO:0002191: cap-dependent translational initiation0.00E+00
4GO:0009821: alkaloid biosynthetic process5.07E-05
5GO:0009968: negative regulation of signal transduction6.91E-05
6GO:0043547: positive regulation of GTPase activity6.91E-05
7GO:0006422: aspartyl-tRNA aminoacylation6.91E-05
8GO:0015914: phospholipid transport1.66E-04
9GO:0019374: galactolipid metabolic process1.66E-04
10GO:0009620: response to fungus2.49E-04
11GO:0030433: ubiquitin-dependent ERAD pathway2.61E-04
12GO:0080055: low-affinity nitrate transport2.81E-04
13GO:1900055: regulation of leaf senescence2.81E-04
14GO:0000289: nuclear-transcribed mRNA poly(A) tail shortening2.81E-04
15GO:0071323: cellular response to chitin4.06E-04
16GO:0006986: response to unfolded protein4.06E-04
17GO:0009749: response to glucose4.53E-04
18GO:0034613: cellular protein localization5.42E-04
19GO:0009615: response to virus6.92E-04
20GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly8.40E-04
21GO:0001731: formation of translation preinitiation complex8.40E-04
22GO:1900425: negative regulation of defense response to bacterium8.40E-04
23GO:0000911: cytokinesis by cell plate formation9.99E-04
24GO:0009612: response to mechanical stimulus9.99E-04
25GO:0043090: amino acid import1.17E-03
26GO:0006744: ubiquinone biosynthetic process1.17E-03
27GO:0016559: peroxisome fission1.34E-03
28GO:0006644: phospholipid metabolic process1.34E-03
29GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline1.34E-03
30GO:1900150: regulation of defense response to fungus1.34E-03
31GO:0051707: response to other organism1.42E-03
32GO:0030968: endoplasmic reticulum unfolded protein response1.53E-03
33GO:0017004: cytochrome complex assembly1.53E-03
34GO:0015996: chlorophyll catabolic process1.53E-03
35GO:0046685: response to arsenic-containing substance1.73E-03
36GO:0030148: sphingolipid biosynthetic process2.36E-03
37GO:0000266: mitochondrial fission2.58E-03
38GO:0015706: nitrate transport2.58E-03
39GO:0006626: protein targeting to mitochondrion2.82E-03
40GO:0006446: regulation of translational initiation3.06E-03
41GO:0009058: biosynthetic process3.54E-03
42GO:0034976: response to endoplasmic reticulum stress3.56E-03
43GO:2000377: regulation of reactive oxygen species metabolic process3.81E-03
44GO:0000027: ribosomal large subunit assembly3.81E-03
45GO:0016575: histone deacetylation4.08E-03
46GO:0006874: cellular calcium ion homeostasis4.08E-03
47GO:0010150: leaf senescence4.62E-03
48GO:0042127: regulation of cell proliferation5.20E-03
49GO:0010182: sugar mediated signaling pathway6.11E-03
50GO:0061025: membrane fusion6.42E-03
51GO:0006623: protein targeting to vacuole6.74E-03
52GO:0000302: response to reactive oxygen species7.07E-03
53GO:0007264: small GTPase mediated signal transduction7.40E-03
54GO:0010252: auxin homeostasis8.08E-03
55GO:0009723: response to ethylene8.25E-03
56GO:0042128: nitrate assimilation9.87E-03
57GO:0016311: dephosphorylation1.06E-02
58GO:0006499: N-terminal protein myristoylation1.18E-02
59GO:0006865: amino acid transport1.26E-02
60GO:0009751: response to salicylic acid1.29E-02
61GO:0045087: innate immune response1.30E-02
62GO:0009753: response to jasmonic acid1.40E-02
63GO:0015031: protein transport1.42E-02
64GO:0006897: endocytosis1.47E-02
65GO:0009744: response to sucrose1.56E-02
66GO:0006468: protein phosphorylation1.57E-02
67GO:0006812: cation transport1.83E-02
68GO:0009809: lignin biosynthetic process1.92E-02
69GO:0006364: rRNA processing1.92E-02
70GO:0010224: response to UV-B1.97E-02
71GO:0006857: oligopeptide transport2.02E-02
72GO:0006417: regulation of translation2.07E-02
73GO:0009553: embryo sac development2.42E-02
74GO:0055085: transmembrane transport2.96E-02
75GO:0006413: translational initiation3.47E-02
76GO:0040008: regulation of growth3.53E-02
77GO:0009451: RNA modification3.71E-02
78GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process3.95E-02
79GO:0007166: cell surface receptor signaling pathway4.01E-02
80GO:0050832: defense response to fungus4.11E-02
81GO:0042742: defense response to bacterium4.69E-02
RankGO TermAdjusted P value
1GO:0050220: prostaglandin-E synthase activity0.00E+00
2GO:0098808: mRNA cap binding0.00E+00
3GO:0016844: strictosidine synthase activity6.19E-05
4GO:0004815: aspartate-tRNA ligase activity6.91E-05
5GO:0019707: protein-cysteine S-acyltransferase activity6.91E-05
6GO:0045140: inositol phosphoceramide synthase activity1.66E-04
7GO:0016805: dipeptidase activity2.81E-04
8GO:0052692: raffinose alpha-galactosidase activity2.81E-04
9GO:0080054: low-affinity nitrate transmembrane transporter activity2.81E-04
10GO:0004557: alpha-galactosidase activity2.81E-04
11GO:0015368: calcium:cation antiporter activity5.42E-04
12GO:0015369: calcium:proton antiporter activity5.42E-04
13GO:0004930: G-protein coupled receptor activity5.42E-04
14GO:0070696: transmembrane receptor protein serine/threonine kinase binding6.87E-04
15GO:0004040: amidase activity6.87E-04
16GO:0036402: proteasome-activating ATPase activity8.40E-04
17GO:0004656: procollagen-proline 4-dioxygenase activity9.99E-04
18GO:0030145: manganese ion binding1.02E-03
19GO:0004620: phospholipase activity1.17E-03
20GO:0008235: metalloexopeptidase activity1.17E-03
21GO:0015491: cation:cation antiporter activity1.34E-03
22GO:0052747: sinapyl alcohol dehydrogenase activity1.34E-03
23GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)1.53E-03
24GO:0015293: symporter activity1.59E-03
25GO:0071949: FAD binding1.73E-03
26GO:0047617: acyl-CoA hydrolase activity1.93E-03
27GO:0004177: aminopeptidase activity2.36E-03
28GO:0045551: cinnamyl-alcohol dehydrogenase activity2.58E-03
29GO:0000175: 3'-5'-exoribonuclease activity2.82E-03
30GO:0004535: poly(A)-specific ribonuclease activity3.06E-03
31GO:0004970: ionotropic glutamate receptor activity3.30E-03
32GO:0005217: intracellular ligand-gated ion channel activity3.30E-03
33GO:0017025: TBP-class protein binding3.30E-03
34GO:0008061: chitin binding3.30E-03
35GO:0031418: L-ascorbic acid binding3.81E-03
36GO:0003954: NADH dehydrogenase activity3.81E-03
37GO:0004407: histone deacetylase activity3.81E-03
38GO:0019706: protein-cysteine S-palmitoyltransferase activity4.35E-03
39GO:0008408: 3'-5' exonuclease activity4.35E-03
40GO:0004540: ribonuclease activity4.35E-03
41GO:0004674: protein serine/threonine kinase activity7.19E-03
42GO:0016301: kinase activity7.97E-03
43GO:0016791: phosphatase activity8.08E-03
44GO:0004721: phosphoprotein phosphatase activity1.02E-02
45GO:0005524: ATP binding1.08E-02
46GO:0042803: protein homodimerization activity1.11E-02
47GO:0005096: GTPase activator activity1.14E-02
48GO:0004722: protein serine/threonine phosphatase activity1.16E-02
49GO:0005215: transporter activity1.19E-02
50GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors1.30E-02
51GO:0003993: acid phosphatase activity1.34E-02
52GO:0005484: SNAP receptor activity1.56E-02
53GO:0016887: ATPase activity2.03E-02
54GO:0015171: amino acid transmembrane transporter activity2.07E-02
55GO:0031625: ubiquitin protein ligase binding2.07E-02
56GO:0000166: nucleotide binding2.33E-02
57GO:0022857: transmembrane transporter activity2.37E-02
58GO:0015035: protein disulfide oxidoreductase activity2.52E-02
59GO:0016740: transferase activity2.84E-02
60GO:0004675: transmembrane receptor protein serine/threonine kinase activity3.47E-02
61GO:0008194: UDP-glycosyltransferase activity3.95E-02
62GO:0003743: translation initiation factor activity4.07E-02
63GO:0042626: ATPase activity, coupled to transmembrane movement of substances4.32E-02
64GO:0005515: protein binding4.83E-02
RankGO TermAdjusted P value
1GO:0000138: Golgi trans cisterna6.91E-05
2GO:0030014: CCR4-NOT complex6.91E-05
3GO:0016021: integral component of membrane7.48E-05
4GO:0031304: intrinsic component of mitochondrial inner membrane1.66E-04
5GO:0030658: transport vesicle membrane4.06E-04
6GO:0005746: mitochondrial respiratory chain6.87E-04
7GO:0016282: eukaryotic 43S preinitiation complex8.40E-04
8GO:0033290: eukaryotic 48S preinitiation complex9.99E-04
9GO:0031597: cytosolic proteasome complex9.99E-04
10GO:0005794: Golgi apparatus1.10E-03
11GO:0031595: nuclear proteasome complex1.17E-03
12GO:0016020: membrane1.18E-03
13GO:0005802: trans-Golgi network1.54E-03
14GO:0008540: proteasome regulatory particle, base subcomplex1.93E-03
15GO:0017119: Golgi transport complex2.14E-03
16GO:0048471: perinuclear region of cytoplasm2.36E-03
17GO:0005769: early endosome3.56E-03
18GO:0005783: endoplasmic reticulum4.03E-03
19GO:0005741: mitochondrial outer membrane4.35E-03
20GO:0005730: nucleolus4.86E-03
21GO:0019898: extrinsic component of membrane6.74E-03
22GO:0009504: cell plate6.74E-03
23GO:0080008: Cul4-RING E3 ubiquitin ligase complex7.82E-03
24GO:0005773: vacuole8.19E-03
25GO:0005778: peroxisomal membrane8.42E-03
26GO:0031902: late endosome membrane1.47E-02
27GO:0005789: endoplasmic reticulum membrane1.79E-02
28GO:0000502: proteasome complex1.92E-02
29GO:0005635: nuclear envelope2.02E-02
30GO:0010008: endosome membrane2.22E-02
31GO:0005777: peroxisome2.67E-02
32GO:0005654: nucleoplasm2.84E-02
33GO:0009705: plant-type vacuole membrane3.65E-02
34GO:0005768: endosome4.23E-02
35GO:0005886: plasma membrane4.41E-02
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Gene type



Gene DE type