co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G09080

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0072722: response to amitrole	0.00E+00
2	GO:0006042: glucosamine biosynthetic process	0.00E+00
3	GO:0071327: cellular response to trehalose stimulus	0.00E+00
4	GO:1901137: carbohydrate derivative biosynthetic process	0.00E+00
5	GO:0070212: protein poly-ADP-ribosylation	0.00E+00
6	GO:0045792: negative regulation of cell size	0.00E+00
7	GO:1900367: positive regulation of defense response to insect	0.00E+00
8	GO:0009617: response to bacterium	2.36E-09
9	GO:0009627: systemic acquired resistance	1.29E-07
10	GO:0006457: protein folding	1.45E-07
11	GO:0034976: response to endoplasmic reticulum stress	1.81E-07
12	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	7.51E-07
13	GO:0031349: positive regulation of defense response	7.51E-07
14	GO:0042742: defense response to bacterium	9.61E-07
15	GO:0009816: defense response to bacterium, incompatible interaction	4.87E-06
16	GO:0006468: protein phosphorylation	1.85E-05
17	GO:0010225: response to UV-C	2.06E-05
18	GO:0051707: response to other organism	2.14E-05
19	GO:0010942: positive regulation of cell death	3.11E-05
20	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	4.39E-05
21	GO:0009626: plant-type hypersensitive response	6.01E-05
22	GO:0006979: response to oxidative stress	7.47E-05
23	GO:0010200: response to chitin	7.98E-05
24	GO:0010120: camalexin biosynthetic process	9.69E-05
25	GO:0006952: defense response	1.07E-04
26	GO:0060862: negative regulation of floral organ abscission	1.22E-04
27	GO:0019276: UDP-N-acetylgalactosamine metabolic process	1.22E-04
28	GO:0034975: protein folding in endoplasmic reticulum	1.22E-04
29	GO:0006047: UDP-N-acetylglucosamine metabolic process	1.22E-04
30	GO:0010421: hydrogen peroxide-mediated programmed cell death	1.22E-04
31	GO:0009700: indole phytoalexin biosynthetic process	1.22E-04
32	GO:0010230: alternative respiration	1.22E-04
33	GO:0046244: salicylic acid catabolic process	1.22E-04
34	GO:1901183: positive regulation of camalexin biosynthetic process	1.22E-04
35	GO:0009751: response to salicylic acid	1.62E-04
36	GO:0010150: leaf senescence	1.99E-04
37	GO:0012501: programmed cell death	2.32E-04
38	GO:0010618: aerenchyma formation	2.82E-04
39	GO:0030003: cellular cation homeostasis	2.82E-04
40	GO:0006011: UDP-glucose metabolic process	4.65E-04
41	GO:0010272: response to silver ion	4.65E-04
42	GO:0048281: inflorescence morphogenesis	4.65E-04
43	GO:0010581: regulation of starch biosynthetic process	4.65E-04
44	GO:0055074: calcium ion homeostasis	4.65E-04
45	GO:0006048: UDP-N-acetylglucosamine biosynthetic process	4.65E-04
46	GO:0009737: response to abscisic acid	4.84E-04
47	GO:0031348: negative regulation of defense response	5.53E-04
48	GO:0019748: secondary metabolic process	5.53E-04
49	GO:0009625: response to insect	6.02E-04
50	GO:0009306: protein secretion	6.53E-04
51	GO:0019438: aromatic compound biosynthetic process	6.66E-04
52	GO:0002239: response to oomycetes	6.66E-04
53	GO:0033014: tetrapyrrole biosynthetic process	6.66E-04
54	GO:0045454: cell redox homeostasis	7.40E-04
55	GO:0080142: regulation of salicylic acid biosynthetic process	8.84E-04
56	GO:0048638: regulation of developmental growth	8.84E-04
57	GO:0046686: response to cadmium ion	9.65E-04
58	GO:0010193: response to ozone	9.99E-04
59	GO:0000302: response to reactive oxygen species	9.99E-04
60	GO:0046283: anthocyanin-containing compound metabolic process	1.12E-03
61	GO:0006465: signal peptide processing	1.12E-03
62	GO:0000304: response to singlet oxygen	1.12E-03
63	GO:0009697: salicylic acid biosynthetic process	1.12E-03
64	GO:0009117: nucleotide metabolic process	1.37E-03
65	GO:0002238: response to molecule of fungal origin	1.37E-03
66	GO:0009615: response to virus	1.42E-03
67	GO:0010310: regulation of hydrogen peroxide metabolic process	1.64E-03
68	GO:0007165: signal transduction	1.71E-03
69	GO:0019745: pentacyclic triterpenoid biosynthetic process	1.92E-03
70	GO:0043068: positive regulation of programmed cell death	2.22E-03
71	GO:0031540: regulation of anthocyanin biosynthetic process	2.22E-03
72	GO:0009787: regulation of abscisic acid-activated signaling pathway	2.22E-03
73	GO:0010204: defense response signaling pathway, resistance gene-independent	2.54E-03
74	GO:0043562: cellular response to nitrogen levels	2.54E-03
75	GO:2000031: regulation of salicylic acid mediated signaling pathway	2.54E-03
76	GO:0006783: heme biosynthetic process	2.87E-03
77	GO:0010112: regulation of systemic acquired resistance	2.87E-03
78	GO:0042542: response to hydrogen peroxide	2.87E-03
79	GO:0051865: protein autoubiquitination	2.87E-03
80	GO:1900426: positive regulation of defense response to bacterium	3.21E-03
81	GO:0010205: photoinhibition	3.21E-03
82	GO:0043067: regulation of programmed cell death	3.21E-03
83	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	3.21E-03
84	GO:0006032: chitin catabolic process	3.57E-03
85	GO:0007064: mitotic sister chromatid cohesion	3.57E-03
86	GO:0009870: defense response signaling pathway, resistance gene-dependent	3.57E-03
87	GO:0000272: polysaccharide catabolic process	3.94E-03
88	GO:0048229: gametophyte development	3.94E-03
89	GO:0006816: calcium ion transport	3.94E-03
90	GO:0009682: induced systemic resistance	3.94E-03
91	GO:0015770: sucrose transport	3.94E-03
92	GO:0010224: response to UV-B	4.16E-03
93	GO:0010105: negative regulation of ethylene-activated signaling pathway	4.32E-03
94	GO:0006790: sulfur compound metabolic process	4.32E-03
95	GO:0002213: defense response to insect	4.32E-03
96	GO:0009651: response to salt stress	4.38E-03
97	GO:0010075: regulation of meristem growth	4.71E-03
98	GO:0006807: nitrogen compound metabolic process	4.71E-03
99	GO:0009934: regulation of meristem structural organization	5.12E-03
100	GO:0034605: cellular response to heat	5.12E-03
101	GO:0002237: response to molecule of bacterial origin	5.12E-03
102	GO:0007034: vacuolar transport	5.12E-03
103	GO:0070588: calcium ion transmembrane transport	5.54E-03
104	GO:0046854: phosphatidylinositol phosphorylation	5.54E-03
105	GO:0042343: indole glucosinolate metabolic process	5.54E-03
106	GO:0009863: salicylic acid mediated signaling pathway	6.42E-03
107	GO:0006874: cellular calcium ion homeostasis	6.87E-03
108	GO:0003333: amino acid transmembrane transport	7.34E-03
109	GO:0016998: cell wall macromolecule catabolic process	7.34E-03
110	GO:0098542: defense response to other organism	7.34E-03
111	GO:0030433: ubiquitin-dependent ERAD pathway	7.81E-03
112	GO:0071456: cellular response to hypoxia	7.81E-03
113	GO:0035428: hexose transmembrane transport	7.81E-03
114	GO:0009814: defense response, incompatible interaction	7.81E-03
115	GO:2000022: regulation of jasmonic acid mediated signaling pathway	7.81E-03
116	GO:0009411: response to UV	8.30E-03
117	GO:0015031: protein transport	1.01E-02
118	GO:0046323: glucose import	1.04E-02
119	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	1.10E-02
120	GO:0010468: regulation of gene expression	1.18E-02
121	GO:0006891: intra-Golgi vesicle-mediated transport	1.20E-02
122	GO:0002229: defense response to oomycetes	1.20E-02
123	GO:0006464: cellular protein modification process	1.38E-02
124	GO:0006904: vesicle docking involved in exocytosis	1.44E-02
125	GO:0051607: defense response to virus	1.50E-02
126	GO:0000910: cytokinesis	1.50E-02
127	GO:0055085: transmembrane transport	1.53E-02
128	GO:0001666: response to hypoxia	1.56E-02
129	GO:0015995: chlorophyll biosynthetic process	1.75E-02
130	GO:0016311: dephosphorylation	1.82E-02
131	GO:0008219: cell death	1.88E-02
132	GO:0080167: response to karrikin	1.90E-02
133	GO:0016192: vesicle-mediated transport	2.00E-02
134	GO:0009407: toxin catabolic process	2.02E-02
135	GO:0010043: response to zinc ion	2.09E-02
136	GO:0048527: lateral root development	2.09E-02
137	GO:0006865: amino acid transport	2.16E-02
138	GO:0045087: innate immune response	2.23E-02
139	GO:0006099: tricarboxylic acid cycle	2.30E-02
140	GO:0006886: intracellular protein transport	2.35E-02
141	GO:0009414: response to water deprivation	2.67E-02
142	GO:0009644: response to high light intensity	2.82E-02
143	GO:0008643: carbohydrate transport	2.82E-02
144	GO:0009636: response to toxic substance	2.90E-02
145	GO:0009965: leaf morphogenesis	2.90E-02
146	GO:0006855: drug transmembrane transport	2.98E-02
147	GO:0031347: regulation of defense response	3.06E-02
148	GO:0042538: hyperosmotic salinity response	3.14E-02
149	GO:0051603: proteolysis involved in cellular protein catabolic process	3.38E-02
150	GO:0009909: regulation of flower development	3.55E-02
151	GO:0050832: defense response to fungus	3.56E-02
152	GO:0006508: proteolysis	3.74E-02
153	GO:0048316: seed development	3.80E-02
154	GO:0009620: response to fungus	3.98E-02
155	GO:0009409: response to cold	4.00E-02
156	GO:0009553: embryo sac development	4.15E-02
157	GO:0009624: response to nematode	4.24E-02
158	GO:0009555: pollen development	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0004360: glutamine-fructose-6-phosphate transaminase (isomerizing) activity	0.00E+00
2	GO:0047720: indoleacetaldoxime dehydratase activity	0.00E+00
3	GO:0010298: dihydrocamalexic acid decarboxylase activity	0.00E+00
4	GO:0016312: inositol bisphosphate phosphatase activity	0.00E+00
5	GO:0003756: protein disulfide isomerase activity	6.81E-07
6	GO:0004674: protein serine/threonine kinase activity	2.14E-06
7	GO:0051082: unfolded protein binding	4.27E-06
8	GO:0047631: ADP-ribose diphosphatase activity	2.06E-05
9	GO:0000210: NAD+ diphosphatase activity	3.11E-05
10	GO:0016301: kinase activity	3.35E-05
11	GO:0005524: ATP binding	3.80E-05
12	GO:0005509: calcium ion binding	5.84E-05
13	GO:0052630: UDP-N-acetylgalactosamine diphosphorylase activity	1.22E-04
14	GO:0097367: carbohydrate derivative binding	1.22E-04
15	GO:0080042: ADP-glucose pyrophosphohydrolase activity	1.22E-04
16	GO:0004325: ferrochelatase activity	1.22E-04
17	GO:0003977: UDP-N-acetylglucosamine diphosphorylase activity	1.22E-04
18	GO:0005262: calcium channel activity	2.65E-04
19	GO:0004338: glucan exo-1,3-beta-glucosidase activity	2.82E-04
20	GO:0004385: guanylate kinase activity	2.82E-04
21	GO:0004776: succinate-CoA ligase (GDP-forming) activity	2.82E-04
22	GO:0080041: ADP-ribose pyrophosphohydrolase activity	2.82E-04
23	GO:0017110: nucleoside-diphosphatase activity	2.82E-04
24	GO:0004775: succinate-CoA ligase (ADP-forming) activity	2.82E-04
25	GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity	4.65E-04
26	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	4.65E-04
27	GO:0035529: NADH pyrophosphatase activity	6.66E-04
28	GO:0042299: lupeol synthase activity	6.66E-04
29	GO:0030246: carbohydrate binding	8.36E-04
30	GO:0016866: intramolecular transferase activity	8.84E-04
31	GO:0015145: monosaccharide transmembrane transporter activity	1.12E-03
32	GO:0008565: protein transporter activity	1.22E-03
33	GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity	1.37E-03
34	GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity	1.37E-03
35	GO:0051920: peroxiredoxin activity	1.64E-03
36	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	1.64E-03
37	GO:0005261: cation channel activity	1.64E-03
38	GO:0030247: polysaccharide binding	1.67E-03
39	GO:0008320: protein transmembrane transporter activity	1.92E-03
40	GO:0008506: sucrose:proton symporter activity	1.92E-03
41	GO:0004714: transmembrane receptor protein tyrosine kinase activity	2.22E-03
42	GO:0004564: beta-fructofuranosidase activity	2.22E-03
43	GO:0016209: antioxidant activity	2.22E-03
44	GO:0004575: sucrose alpha-glucosidase activity	3.21E-03
45	GO:0004568: chitinase activity	3.57E-03
46	GO:0008171: O-methyltransferase activity	3.57E-03
47	GO:0004713: protein tyrosine kinase activity	3.57E-03
48	GO:0051287: NAD binding	3.61E-03
49	GO:0008559: xenobiotic-transporting ATPase activity	3.94E-03
50	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	4.60E-03
51	GO:0005388: calcium-transporting ATPase activity	4.71E-03
52	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	5.12E-03
53	GO:0004970: ionotropic glutamate receptor activity	5.54E-03
54	GO:0004867: serine-type endopeptidase inhibitor activity	5.54E-03
55	GO:0008061: chitin binding	5.54E-03
56	GO:0005217: intracellular ligand-gated ion channel activity	5.54E-03
57	GO:0004707: MAP kinase activity	7.34E-03
58	GO:0004298: threonine-type endopeptidase activity	7.34E-03
59	GO:0016779: nucleotidyltransferase activity	7.81E-03
60	GO:0022891: substrate-specific transmembrane transporter activity	8.30E-03
61	GO:0008810: cellulase activity	8.30E-03
62	GO:0016887: ATPase activity	9.49E-03
63	GO:0005355: glucose transmembrane transporter activity	1.09E-02
64	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	1.25E-02
65	GO:0004197: cysteine-type endopeptidase activity	1.26E-02
66	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.32E-02
67	GO:0008483: transaminase activity	1.44E-02
68	GO:0051213: dioxygenase activity	1.56E-02
69	GO:0005515: protein binding	1.66E-02
70	GO:0004806: triglyceride lipase activity	1.75E-02
71	GO:0019825: oxygen binding	1.77E-02
72	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	1.82E-02
73	GO:0008233: peptidase activity	1.87E-02
74	GO:0015238: drug transmembrane transporter activity	1.95E-02
75	GO:0061630: ubiquitin protein ligase activity	2.00E-02
76	GO:0004222: metalloendopeptidase activity	2.02E-02
77	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	2.23E-02
78	GO:0000987: core promoter proximal region sequence-specific DNA binding	2.30E-02
79	GO:0004364: glutathione transferase activity	2.59E-02
80	GO:0004185: serine-type carboxypeptidase activity	2.67E-02
81	GO:0005506: iron ion binding	2.69E-02
82	GO:0016298: lipase activity	3.38E-02
83	GO:0015171: amino acid transmembrane transporter activity	3.55E-02
84	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	3.80E-02
85	GO:0080043: quercetin 3-O-glucosyltransferase activity	3.98E-02
86	GO:0080044: quercetin 7-O-glucosyltransferase activity	3.98E-02
87	GO:0004842: ubiquitin-protein transferase activity	4.10E-02
88	GO:0015035: protein disulfide oxidoreductase activity	4.33E-02
89	GO:0004672: protein kinase activity	4.41E-02
90	GO:0020037: heme binding	4.81E-02
91	GO:0016758: transferase activity, transferring hexosyl groups	4.88E-02

Rank	GO Term	Adjusted P value
1	GO:0000327: lytic vacuole within protein storage vacuole	0.00E+00
2	GO:0005788: endoplasmic reticulum lumen	3.29E-13
3	GO:0005783: endoplasmic reticulum	5.15E-12
4	GO:0005886: plasma membrane	3.89E-08
5	GO:0016021: integral component of membrane	9.91E-05
6	GO:0005787: signal peptidase complex	1.22E-04
7	GO:0030134: ER to Golgi transport vesicle	2.82E-04
8	GO:0005773: vacuole	1.15E-03
9	GO:0005774: vacuolar membrane	1.40E-03
10	GO:0048046: apoplast	1.56E-03
11	GO:0000326: protein storage vacuole	2.54E-03
12	GO:0031090: organelle membrane	2.87E-03
13	GO:0005740: mitochondrial envelope	3.57E-03
14	GO:0005789: endoplasmic reticulum membrane	3.58E-03
15	GO:0031012: extracellular matrix	4.71E-03
16	GO:0005795: Golgi stack	5.54E-03
17	GO:0005618: cell wall	6.06E-03
18	GO:0016020: membrane	6.32E-03
19	GO:0005576: extracellular region	6.33E-03
20	GO:0005741: mitochondrial outer membrane	7.34E-03
21	GO:0005839: proteasome core complex	7.34E-03
22	GO:0019898: extrinsic component of membrane	1.15E-02
23	GO:0046658: anchored component of plasma membrane	1.31E-02
24	GO:0032580: Golgi cisterna membrane	1.38E-02
25	GO:0005829: cytosol	1.79E-02
26	GO:0031969: chloroplast membrane	1.90E-02
27	GO:0031225: anchored component of membrane	1.98E-02
28	GO:0000325: plant-type vacuole	2.09E-02
29	GO:0005856: cytoskeleton	2.90E-02
30	GO:0043231: intracellular membrane-bounded organelle	3.09E-02
31	GO:0000502: proteasome complex	3.30E-02
32	GO:0009505: plant-type cell wall	3.63E-02
33	GO:0005887: integral component of plasma membrane	3.80E-02
34	GO:0009706: chloroplast inner membrane	4.24E-02