Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G07630

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0007160: cell-matrix adhesion0.00E+00
2GO:0080056: petal vascular tissue pattern formation0.00E+00
3GO:0009312: oligosaccharide biosynthetic process0.00E+00
4GO:0032497: detection of lipopolysaccharide0.00E+00
5GO:2001253: regulation of histone H3-K36 trimethylation0.00E+00
6GO:0002764: immune response-regulating signaling pathway0.00E+00
7GO:0006983: ER overload response0.00E+00
8GO:0006987: activation of signaling protein activity involved in unfolded protein response0.00E+00
9GO:0080057: sepal vascular tissue pattern formation0.00E+00
10GO:0010793: regulation of mRNA export from nucleus0.00E+00
11GO:0048867: stem cell fate determination0.00E+00
12GO:0000478: endonucleolytic cleavage involved in rRNA processing0.00E+00
13GO:0071578: zinc II ion transmembrane import0.00E+00
14GO:0010499: proteasomal ubiquitin-independent protein catabolic process0.00E+00
15GO:0006468: protein phosphorylation6.58E-06
16GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway2.16E-05
17GO:0048367: shoot system development5.31E-05
18GO:0045087: innate immune response1.27E-04
19GO:0035266: meristem growth2.84E-04
20GO:0098710: guanine import across plasma membrane2.84E-04
21GO:0048363: mucilage pectin metabolic process2.84E-04
22GO:0071596: ubiquitin-dependent protein catabolic process via the N-end rule pathway2.84E-04
23GO:0007292: female gamete generation2.84E-04
24GO:0000303: response to superoxide2.84E-04
25GO:0010941: regulation of cell death2.84E-04
26GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic2.84E-04
27GO:0035344: hypoxanthine transport2.84E-04
28GO:0031338: regulation of vesicle fusion2.84E-04
29GO:0098721: uracil import across plasma membrane2.84E-04
30GO:0042759: long-chain fatty acid biosynthetic process2.84E-04
31GO:0098702: adenine import across plasma membrane2.84E-04
32GO:0048544: recognition of pollen2.92E-04
33GO:0048364: root development3.79E-04
34GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway4.91E-04
35GO:0050684: regulation of mRNA processing6.25E-04
36GO:0050994: regulation of lipid catabolic process6.25E-04
37GO:0006212: uracil catabolic process6.25E-04
38GO:0043066: negative regulation of apoptotic process6.25E-04
39GO:0019483: beta-alanine biosynthetic process6.25E-04
40GO:0051788: response to misfolded protein6.25E-04
41GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine6.25E-04
42GO:0051258: protein polymerization6.25E-04
43GO:0042325: regulation of phosphorylation6.25E-04
44GO:0055046: microgametogenesis8.57E-04
45GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic1.01E-03
46GO:0060968: regulation of gene silencing1.01E-03
47GO:1900055: regulation of leaf senescence1.01E-03
48GO:0032784: regulation of DNA-templated transcription, elongation1.01E-03
49GO:0016045: detection of bacterium1.01E-03
50GO:0010498: proteasomal protein catabolic process1.01E-03
51GO:0010359: regulation of anion channel activity1.01E-03
52GO:0042780: tRNA 3'-end processing1.01E-03
53GO:0090630: activation of GTPase activity1.01E-03
54GO:2000377: regulation of reactive oxygen species metabolic process1.32E-03
55GO:0048194: Golgi vesicle budding1.45E-03
56GO:2001289: lipid X metabolic process1.45E-03
57GO:1901000: regulation of response to salt stress1.45E-03
58GO:0070301: cellular response to hydrogen peroxide1.45E-03
59GO:0072334: UDP-galactose transmembrane transport1.45E-03
60GO:0006874: cellular calcium ion homeostasis1.45E-03
61GO:0015749: monosaccharide transport1.45E-03
62GO:0010104: regulation of ethylene-activated signaling pathway1.45E-03
63GO:0006809: nitric oxide biosynthetic process1.45E-03
64GO:0009399: nitrogen fixation1.45E-03
65GO:0080001: mucilage extrusion from seed coat1.45E-03
66GO:0072583: clathrin-dependent endocytosis1.45E-03
67GO:0002679: respiratory burst involved in defense response1.45E-03
68GO:0046513: ceramide biosynthetic process1.45E-03
69GO:0010116: positive regulation of abscisic acid biosynthetic process1.45E-03
70GO:0051123: RNA polymerase II transcriptional preinitiation complex assembly1.94E-03
71GO:0033320: UDP-D-xylose biosynthetic process1.94E-03
72GO:0061088: regulation of sequestering of zinc ion1.94E-03
73GO:0006542: glutamine biosynthetic process1.94E-03
74GO:0007029: endoplasmic reticulum organization2.48E-03
75GO:0048015: phosphatidylinositol-mediated signaling2.48E-03
76GO:0006090: pyruvate metabolic process2.48E-03
77GO:0009164: nucleoside catabolic process2.48E-03
78GO:0005513: detection of calcium ion2.48E-03
79GO:0097428: protein maturation by iron-sulfur cluster transfer2.48E-03
80GO:0046323: glucose import2.61E-03
81GO:0009626: plant-type hypersensitive response2.86E-03
82GO:0048827: phyllome development3.06E-03
83GO:0006388: tRNA splicing, via endonucleolytic cleavage and ligation3.06E-03
84GO:0010264: myo-inositol hexakisphosphate biosynthetic process3.06E-03
85GO:0048232: male gamete generation3.06E-03
86GO:0043248: proteasome assembly3.06E-03
87GO:0042732: D-xylose metabolic process3.06E-03
88GO:1900425: negative regulation of defense response to bacterium3.06E-03
89GO:0002238: response to molecule of fungal origin3.06E-03
90GO:0006014: D-ribose metabolic process3.06E-03
91GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly3.06E-03
92GO:0046686: response to cadmium ion3.55E-03
93GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response3.68E-03
94GO:0043966: histone H3 acetylation3.68E-03
95GO:0009612: response to mechanical stimulus3.68E-03
96GO:0006694: steroid biosynthetic process3.68E-03
97GO:0046777: protein autophosphorylation3.87E-03
98GO:0006904: vesicle docking involved in exocytosis4.14E-03
99GO:1902074: response to salt4.34E-03
100GO:0016579: protein deubiquitination4.39E-03
101GO:0009816: defense response to bacterium, incompatible interaction4.91E-03
102GO:0010078: maintenance of root meristem identity5.03E-03
103GO:1900150: regulation of defense response to fungus5.03E-03
104GO:0006875: cellular metal ion homeostasis5.03E-03
105GO:0006303: double-strand break repair via nonhomologous end joining5.77E-03
106GO:2000031: regulation of salicylic acid mediated signaling pathway5.77E-03
107GO:0009827: plant-type cell wall modification5.77E-03
108GO:0010204: defense response signaling pathway, resistance gene-independent5.77E-03
109GO:0030968: endoplasmic reticulum unfolded protein response5.77E-03
110GO:0043562: cellular response to nitrogen levels5.77E-03
111GO:0008219: cell death6.06E-03
112GO:0010311: lateral root formation6.37E-03
113GO:0009051: pentose-phosphate shunt, oxidative branch6.54E-03
114GO:0009821: alkaloid biosynthetic process6.54E-03
115GO:0051865: protein autoubiquitination6.54E-03
116GO:0010112: regulation of systemic acquired resistance6.54E-03
117GO:0006499: N-terminal protein myristoylation6.68E-03
118GO:0010150: leaf senescence6.71E-03
119GO:0000723: telomere maintenance7.35E-03
120GO:0009867: jasmonic acid mediated signaling pathway7.68E-03
121GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process7.74E-03
122GO:0010629: negative regulation of gene expression8.19E-03
123GO:0043069: negative regulation of programmed cell death8.19E-03
124GO:0048829: root cap development8.19E-03
125GO:0010015: root morphogenesis9.06E-03
126GO:0000038: very long-chain fatty acid metabolic process9.06E-03
127GO:0072593: reactive oxygen species metabolic process9.06E-03
128GO:0009682: induced systemic resistance9.06E-03
129GO:0006352: DNA-templated transcription, initiation9.06E-03
130GO:0006887: exocytosis9.14E-03
131GO:0006897: endocytosis9.14E-03
132GO:0071365: cellular response to auxin stimulus9.96E-03
133GO:0000266: mitochondrial fission9.96E-03
134GO:0012501: programmed cell death9.96E-03
135GO:0010152: pollen maturation9.96E-03
136GO:0000209: protein polyubiquitination1.03E-02
137GO:0010588: cotyledon vascular tissue pattern formation1.09E-02
138GO:0010102: lateral root morphogenesis1.09E-02
139GO:0006108: malate metabolic process1.09E-02
140GO:0006807: nitrogen compound metabolic process1.09E-02
141GO:0009933: meristem structural organization1.19E-02
142GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process1.20E-02
143GO:0006812: cation transport1.25E-02
144GO:0009225: nucleotide-sugar metabolic process1.29E-02
145GO:0090351: seedling development1.29E-02
146GO:0046854: phosphatidylinositol phosphorylation1.29E-02
147GO:0009723: response to ethylene1.41E-02
148GO:0048366: leaf development1.44E-02
149GO:0006825: copper ion transport1.60E-02
150GO:0010073: meristem maintenance1.60E-02
151GO:0010200: response to chitin1.61E-02
152GO:0051260: protein homooligomerization1.72E-02
153GO:0009620: response to fungus1.75E-02
154GO:2000022: regulation of jasmonic acid mediated signaling pathway1.83E-02
155GO:0030433: ubiquitin-dependent ERAD pathway1.83E-02
156GO:0031348: negative regulation of defense response1.83E-02
157GO:0007165: signal transduction1.84E-02
158GO:0071215: cellular response to abscisic acid stimulus1.95E-02
159GO:0009625: response to insect1.95E-02
160GO:0006886: intracellular protein transport2.01E-02
161GO:0009742: brassinosteroid mediated signaling pathway2.03E-02
162GO:0009561: megagametogenesis2.07E-02
163GO:0042631: cellular response to water deprivation2.31E-02
164GO:0006511: ubiquitin-dependent protein catabolic process2.38E-02
165GO:0006885: regulation of pH2.44E-02
166GO:0010305: leaf vascular tissue pattern formation2.44E-02
167GO:0009751: response to salicylic acid2.47E-02
168GO:0016310: phosphorylation2.51E-02
169GO:0009408: response to heat2.52E-02
170GO:0009749: response to glucose2.70E-02
171GO:0019252: starch biosynthetic process2.70E-02
172GO:0009790: embryo development2.80E-02
173GO:0000302: response to reactive oxygen species2.83E-02
174GO:0002229: defense response to oomycetes2.83E-02
175GO:0010193: response to ozone2.83E-02
176GO:0007264: small GTPase mediated signal transduction2.97E-02
177GO:0010583: response to cyclopentenone2.97E-02
178GO:0016032: viral process2.97E-02
179GO:0010252: auxin homeostasis3.25E-02
180GO:0006914: autophagy3.25E-02
181GO:0006310: DNA recombination3.25E-02
182GO:0009873: ethylene-activated signaling pathway3.46E-02
183GO:0016126: sterol biosynthetic process3.68E-02
184GO:0001666: response to hypoxia3.68E-02
185GO:0009615: response to virus3.68E-02
186GO:0006470: protein dephosphorylation3.78E-02
187GO:0007166: cell surface receptor signaling pathway3.78E-02
188GO:0010029: regulation of seed germination3.83E-02
189GO:0009617: response to bacterium3.94E-02
190GO:0009627: systemic acquired resistance3.98E-02
191GO:0042128: nitrate assimilation3.98E-02
192GO:0048573: photoperiodism, flowering4.13E-02
193GO:0006888: ER to Golgi vesicle-mediated transport4.13E-02
194GO:0006950: response to stress4.13E-02
195GO:0016049: cell growth4.29E-02
196GO:0010119: regulation of stomatal movement4.93E-02
197GO:0010043: response to zinc ion4.93E-02
RankGO TermAdjusted P value
1GO:0005365: myo-inositol transmembrane transporter activity0.00E+00
2GO:0032442: phenylcoumaran benzylic ether reductase activity0.00E+00
3GO:0015576: sorbitol transmembrane transporter activity0.00E+00
4GO:0005548: phospholipid transporter activity0.00E+00
5GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity0.00E+00
6GO:0003837: beta-ureidopropionase activity0.00E+00
7GO:0070577: lysine-acetylated histone binding0.00E+00
8GO:0015591: D-ribose transmembrane transporter activity0.00E+00
9GO:0005358: high-affinity hydrogen:glucose symporter activity0.00E+00
10GO:0015148: D-xylose transmembrane transporter activity0.00E+00
11GO:0015575: mannitol transmembrane transporter activity0.00E+00
12GO:0016504: peptidase activator activity0.00E+00
13GO:0016301: kinase activity1.28E-08
14GO:0005524: ATP binding7.33E-08
15GO:0004674: protein serine/threonine kinase activity3.51E-07
16GO:0019829: cation-transporting ATPase activity1.33E-05
17GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism4.85E-05
18GO:0015145: monosaccharide transmembrane transporter activity8.49E-05
19GO:0004012: phospholipid-translocating ATPase activity1.69E-04
20GO:0009679: hexose:proton symporter activity2.84E-04
21GO:0032050: clathrin heavy chain binding2.84E-04
22GO:0016303: 1-phosphatidylinositol-3-kinase activity2.84E-04
23GO:0001102: RNA polymerase II activating transcription factor binding2.84E-04
24GO:0015208: guanine transmembrane transporter activity2.84E-04
25GO:0004112: cyclic-nucleotide phosphodiesterase activity2.84E-04
26GO:0016274: protein-arginine N-methyltransferase activity2.84E-04
27GO:0015294: solute:cation symporter activity2.84E-04
28GO:0015207: adenine transmembrane transporter activity2.84E-04
29GO:0019707: protein-cysteine S-acyltransferase activity2.84E-04
30GO:0015168: glycerol transmembrane transporter activity2.84E-04
31GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity2.84E-04
32GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity2.84E-04
33GO:0004672: protein kinase activity3.05E-04
34GO:0016891: endoribonuclease activity, producing 5'-phosphomonoesters6.25E-04
35GO:0047012: sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity6.25E-04
36GO:0050291: sphingosine N-acyltransferase activity6.25E-04
37GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity1.01E-03
38GO:0003955: NAD(P)H dehydrogenase (quinone) activity1.01E-03
39GO:0042781: 3'-tRNA processing endoribonuclease activity1.01E-03
40GO:0004383: guanylate cyclase activity1.01E-03
41GO:0016805: dipeptidase activity1.01E-03
42GO:0004473: malate dehydrogenase (decarboxylating) (NADP+) activity1.01E-03
43GO:0015144: carbohydrate transmembrane transporter activity1.04E-03
44GO:0017025: TBP-class protein binding1.07E-03
45GO:0005351: sugar:proton symporter activity1.25E-03
46GO:0005354: galactose transmembrane transporter activity1.45E-03
47GO:0001653: peptide receptor activity1.45E-03
48GO:0036459: thiol-dependent ubiquitinyl hydrolase activity1.60E-03
49GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor1.94E-03
50GO:0004471: malate dehydrogenase (decarboxylating) (NAD+) activity1.94E-03
51GO:0070628: proteasome binding1.94E-03
52GO:0015210: uracil transmembrane transporter activity1.94E-03
53GO:0004470: malic enzyme activity1.94E-03
54GO:0019199: transmembrane receptor protein kinase activity1.94E-03
55GO:0016652: oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor1.94E-03
56GO:0030246: carbohydrate binding1.98E-03
57GO:0005459: UDP-galactose transmembrane transporter activity2.48E-03
58GO:0008948: oxaloacetate decarboxylase activity2.48E-03
59GO:0017137: Rab GTPase binding2.48E-03
60GO:0004356: glutamate-ammonia ligase activity2.48E-03
61GO:0048040: UDP-glucuronate decarboxylase activity3.06E-03
62GO:0015562: efflux transmembrane transporter activity3.06E-03
63GO:0036402: proteasome-activating ATPase activity3.06E-03
64GO:0004843: thiol-dependent ubiquitin-specific protease activity3.22E-03
65GO:0070403: NAD+ binding3.68E-03
66GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides3.68E-03
67GO:0003950: NAD+ ADP-ribosyltransferase activity3.68E-03
68GO:0004747: ribokinase activity3.68E-03
69GO:0008235: metalloexopeptidase activity4.34E-03
70GO:0042162: telomeric DNA binding4.34E-03
71GO:0008865: fructokinase activity5.03E-03
72GO:0004714: transmembrane receptor protein tyrosine kinase activity5.03E-03
73GO:0004630: phospholipase D activity5.77E-03
74GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity5.77E-03
75GO:0005375: copper ion transmembrane transporter activity5.77E-03
76GO:0005096: GTPase activator activity6.37E-03
77GO:0008417: fucosyltransferase activity6.54E-03
78GO:0004003: ATP-dependent DNA helicase activity6.54E-03
79GO:0071949: FAD binding6.54E-03
80GO:0008138: protein tyrosine/serine/threonine phosphatase activity6.54E-03
81GO:0005515: protein binding6.71E-03
82GO:0004743: pyruvate kinase activity7.35E-03
83GO:0030955: potassium ion binding7.35E-03
84GO:0016844: strictosidine synthase activity7.35E-03
85GO:0004713: protein tyrosine kinase activity8.19E-03
86GO:0004177: aminopeptidase activity9.06E-03
87GO:0004521: endoribonuclease activity9.96E-03
88GO:0019888: protein phosphatase regulator activity1.09E-02
89GO:0005388: calcium-transporting ATPase activity1.09E-02
90GO:0005198: structural molecule activity1.12E-02
91GO:0000287: magnesium ion binding1.14E-02
92GO:0016887: ATPase activity1.23E-02
93GO:0004970: ionotropic glutamate receptor activity1.29E-02
94GO:0005217: intracellular ligand-gated ion channel activity1.29E-02
95GO:0004725: protein tyrosine phosphatase activity1.39E-02
96GO:0051536: iron-sulfur cluster binding1.50E-02
97GO:0005385: zinc ion transmembrane transporter activity1.50E-02
98GO:0003954: NADH dehydrogenase activity1.50E-02
99GO:0043130: ubiquitin binding1.50E-02
100GO:0043424: protein histidine kinase binding1.60E-02
101GO:0008324: cation transmembrane transporter activity1.60E-02
102GO:0061630: ubiquitin protein ligase activity1.64E-02
103GO:0004707: MAP kinase activity1.72E-02
104GO:0033612: receptor serine/threonine kinase binding1.72E-02
105GO:0019706: protein-cysteine S-palmitoyltransferase activity1.72E-02
106GO:0004402: histone acetyltransferase activity2.31E-02
107GO:0005451: monovalent cation:proton antiporter activity2.31E-02
108GO:0001085: RNA polymerase II transcription factor binding2.44E-02
109GO:0005355: glucose transmembrane transporter activity2.57E-02
110GO:0015299: solute:proton antiporter activity2.57E-02
111GO:0010181: FMN binding2.57E-02
112GO:0015385: sodium:proton antiporter activity3.11E-02
113GO:0003684: damaged DNA binding3.25E-02
114GO:0051213: dioxygenase activity3.68E-02
115GO:0008375: acetylglucosaminyltransferase activity3.98E-02
116GO:0009931: calcium-dependent protein serine/threonine kinase activity3.98E-02
117GO:0030247: polysaccharide binding4.13E-02
118GO:0004683: calmodulin-dependent protein kinase activity4.13E-02
119GO:0046872: metal ion binding4.68E-02
120GO:0004222: metalloendopeptidase activity4.76E-02
121GO:0005215: transporter activity4.91E-02
122GO:0030145: manganese ion binding4.93E-02
123GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding4.93E-02
124GO:0046982: protein heterodimerization activity4.99E-02
RankGO TermAdjusted P value
1GO:0005942: phosphatidylinositol 3-kinase complex0.00E+00
2GO:0008305: integrin complex0.00E+00
3GO:0005886: plasma membrane2.41E-11
4GO:0016021: integral component of membrane4.53E-08
5GO:0005789: endoplasmic reticulum membrane1.82E-05
6GO:0005783: endoplasmic reticulum1.79E-04
7GO:0043564: Ku70:Ku80 complex2.84E-04
8GO:0045252: oxoglutarate dehydrogenase complex2.84E-04
9GO:0000138: Golgi trans cisterna2.84E-04
10GO:0005794: Golgi apparatus4.85E-04
11GO:0030125: clathrin vesicle coat5.73E-04
12GO:0031304: intrinsic component of mitochondrial inner membrane6.25E-04
13GO:0000124: SAGA complex6.25E-04
14GO:0042406: extrinsic component of endoplasmic reticulum membrane1.01E-03
15GO:0070062: extracellular exosome1.45E-03
16GO:0005774: vacuolar membrane2.89E-03
17GO:0030127: COPII vesicle coat3.06E-03
18GO:0012505: endomembrane system3.22E-03
19GO:0000145: exocyst3.43E-03
20GO:0030173: integral component of Golgi membrane3.68E-03
21GO:0016363: nuclear matrix3.68E-03
22GO:0031597: cytosolic proteasome complex3.68E-03
23GO:0031595: nuclear proteasome complex4.34E-03
24GO:0030131: clathrin adaptor complex5.03E-03
25GO:0005669: transcription factor TFIID complex5.03E-03
26GO:0000784: nuclear chromosome, telomeric region5.77E-03
27GO:0005829: cytosol7.25E-03
28GO:0008540: proteasome regulatory particle, base subcomplex7.35E-03
29GO:0005773: vacuole8.53E-03
30GO:0016020: membrane8.95E-03
31GO:0005802: trans-Golgi network9.45E-03
32GO:0005768: endosome1.18E-02
33GO:0005795: Golgi stack1.29E-02
34GO:0030176: integral component of endoplasmic reticulum membrane1.29E-02
35GO:0005769: early endosome1.39E-02
36GO:0043234: protein complex1.39E-02
37GO:0045271: respiratory chain complex I1.60E-02
38GO:0005839: proteasome core complex1.72E-02
39GO:0005905: clathrin-coated pit1.72E-02
40GO:0031410: cytoplasmic vesicle1.83E-02
41GO:0032580: Golgi cisterna membrane3.25E-02
42GO:0009506: plasmodesma3.74E-02
43GO:0005667: transcription factor complex3.98E-02
44GO:0000151: ubiquitin ligase complex4.45E-02
45GO:0005737: cytoplasm4.62E-02
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Gene type



Gene DE type