Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G07220

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0072660: maintenance of protein location in plasma membrane0.00E+00
2GO:0000466: maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)0.00E+00
3GO:0019428: allantoin biosynthetic process0.00E+00
4GO:0010499: proteasomal ubiquitin-independent protein catabolic process0.00E+00
5GO:0006468: protein phosphorylation2.78E-11
6GO:0042742: defense response to bacterium2.46E-07
7GO:0043069: negative regulation of programmed cell death8.73E-07
8GO:0031349: positive regulation of defense response5.59E-06
9GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine5.59E-06
10GO:0006952: defense response6.38E-06
11GO:0006517: protein deglycosylation1.97E-05
12GO:0000187: activation of MAPK activity4.34E-05
13GO:0060548: negative regulation of cell death7.72E-05
14GO:0007166: cell surface receptor signaling pathway9.01E-05
15GO:0009627: systemic acquired resistance1.10E-04
16GO:0070588: calcium ion transmembrane transport1.12E-04
17GO:0010942: positive regulation of cell death1.74E-04
18GO:0031348: negative regulation of defense response2.32E-04
19GO:0006099: tricarboxylic acid cycle2.36E-04
20GO:0006508: proteolysis2.46E-04
21GO:0017183: peptidyl-diphthamide biosynthetic process from peptidyl-histidine3.52E-04
22GO:0001560: regulation of cell growth by extracellular stimulus3.52E-04
23GO:0019628: urate catabolic process3.52E-04
24GO:0043547: positive regulation of GTPase activity3.52E-04
25GO:0051245: negative regulation of cellular defense response3.52E-04
26GO:0006422: aspartyl-tRNA aminoacylation3.52E-04
27GO:0055081: anion homeostasis3.52E-04
28GO:0002143: tRNA wobble position uridine thiolation3.52E-04
29GO:0043687: post-translational protein modification3.52E-04
30GO:0006643: membrane lipid metabolic process3.52E-04
31GO:0006680: glucosylceramide catabolic process3.52E-04
32GO:0046244: salicylic acid catabolic process3.52E-04
33GO:0060862: negative regulation of floral organ abscission3.52E-04
34GO:0006144: purine nucleobase metabolic process3.52E-04
35GO:0009968: negative regulation of signal transduction3.52E-04
36GO:0010266: response to vitamin B13.52E-04
37GO:0006102: isocitrate metabolic process3.84E-04
38GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline3.84E-04
39GO:0006886: intracellular protein transport4.63E-04
40GO:0009617: response to bacterium5.78E-04
41GO:0009626: plant-type hypersensitive response7.61E-04
42GO:0002221: pattern recognition receptor signaling pathway7.67E-04
43GO:2000072: regulation of defense response to fungus, incompatible interaction7.67E-04
44GO:0019919: peptidyl-arginine methylation, to asymmetrical-dimethyl arginine7.67E-04
45GO:0080185: effector dependent induction by symbiont of host immune response7.67E-04
46GO:0010618: aerenchyma formation7.67E-04
47GO:0006695: cholesterol biosynthetic process7.67E-04
48GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)7.67E-04
49GO:1902000: homogentisate catabolic process7.67E-04
50GO:0008535: respiratory chain complex IV assembly7.67E-04
51GO:0009620: response to fungus7.97E-04
52GO:0072661: protein targeting to plasma membrane1.24E-03
53GO:0009072: aromatic amino acid family metabolic process1.24E-03
54GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway1.24E-03
55GO:0009062: fatty acid catabolic process1.24E-03
56GO:1900140: regulation of seedling development1.24E-03
57GO:0055074: calcium ion homeostasis1.24E-03
58GO:0034976: response to endoplasmic reticulum stress1.62E-03
59GO:0050832: defense response to fungus1.70E-03
60GO:0006515: misfolded or incompletely synthesized protein catabolic process1.79E-03
61GO:0048194: Golgi vesicle budding1.79E-03
62GO:0002239: response to oomycetes1.79E-03
63GO:0006612: protein targeting to membrane1.79E-03
64GO:0048530: fruit morphogenesis1.79E-03
65GO:0010148: transpiration1.79E-03
66GO:0006516: glycoprotein catabolic process1.79E-03
67GO:0071323: cellular response to chitin1.79E-03
68GO:0051289: protein homotetramerization1.79E-03
69GO:0006487: protein N-linked glycosylation1.80E-03
70GO:0009863: salicylic acid mediated signaling pathway1.80E-03
71GO:0009814: defense response, incompatible interaction2.38E-03
72GO:0010363: regulation of plant-type hypersensitive response2.40E-03
73GO:0000460: maturation of 5.8S rRNA2.40E-03
74GO:2000038: regulation of stomatal complex development2.40E-03
75GO:0031087: deadenylation-independent decapping of nuclear-transcribed mRNA2.40E-03
76GO:0010188: response to microbial phytotoxin2.40E-03
77GO:0080142: regulation of salicylic acid biosynthetic process2.40E-03
78GO:0010227: floral organ abscission2.60E-03
79GO:0031365: N-terminal protein amino acid modification3.07E-03
80GO:0000304: response to singlet oxygen3.07E-03
81GO:0030041: actin filament polymerization3.07E-03
82GO:0018279: protein N-linked glycosylation via asparagine3.07E-03
83GO:0046283: anthocyanin-containing compound metabolic process3.07E-03
84GO:0006777: Mo-molybdopterin cofactor biosynthetic process3.79E-03
85GO:0000470: maturation of LSU-rRNA3.79E-03
86GO:0060918: auxin transport3.79E-03
87GO:0047484: regulation of response to osmotic stress3.79E-03
88GO:0061025: membrane fusion3.83E-03
89GO:0009749: response to glucose4.11E-03
90GO:0000302: response to reactive oxygen species4.40E-03
91GO:0006891: intra-Golgi vesicle-mediated transport4.40E-03
92GO:0010555: response to mannitol4.57E-03
93GO:2000037: regulation of stomatal complex patterning4.57E-03
94GO:0010310: regulation of hydrogen peroxide metabolic process4.57E-03
95GO:2000067: regulation of root morphogenesis4.57E-03
96GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response4.57E-03
97GO:0000911: cytokinesis by cell plate formation4.57E-03
98GO:0009612: response to mechanical stimulus4.57E-03
99GO:0006694: steroid biosynthetic process4.57E-03
100GO:0010199: organ boundary specification between lateral organs and the meristem4.57E-03
101GO:0030163: protein catabolic process5.01E-03
102GO:0010044: response to aluminum ion5.40E-03
103GO:0046470: phosphatidylcholine metabolic process5.40E-03
104GO:0043090: amino acid import5.40E-03
105GO:0071446: cellular response to salicylic acid stimulus5.40E-03
106GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c5.40E-03
107GO:0016192: vesicle-mediated transport6.11E-03
108GO:0009787: regulation of abscisic acid-activated signaling pathway6.27E-03
109GO:0030162: regulation of proteolysis6.27E-03
110GO:0006491: N-glycan processing6.27E-03
111GO:0016126: sterol biosynthetic process6.37E-03
112GO:0009816: defense response to bacterium, incompatible interaction6.74E-03
113GO:2000031: regulation of salicylic acid mediated signaling pathway7.19E-03
114GO:0009699: phenylpropanoid biosynthetic process7.19E-03
115GO:0006002: fructose 6-phosphate metabolic process7.19E-03
116GO:0007186: G-protein coupled receptor signaling pathway7.19E-03
117GO:0006367: transcription initiation from RNA polymerase II promoter7.19E-03
118GO:0010204: defense response signaling pathway, resistance gene-independent7.19E-03
119GO:0045454: cell redox homeostasis7.44E-03
120GO:0008219: cell death8.33E-03
121GO:0009817: defense response to fungus, incompatible interaction8.33E-03
122GO:0010205: photoinhibition9.17E-03
123GO:0048268: clathrin coat assembly9.17E-03
124GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway9.17E-03
125GO:0006499: N-terminal protein myristoylation9.19E-03
126GO:0010119: regulation of stomatal movement9.64E-03
127GO:0009751: response to salicylic acid1.00E-02
128GO:0010150: leaf senescence1.01E-02
129GO:0010215: cellulose microfibril organization1.02E-02
130GO:0000103: sulfate assimilation1.02E-02
131GO:0006032: chitin catabolic process1.02E-02
132GO:0045087: innate immune response1.06E-02
133GO:0019684: photosynthesis, light reaction1.13E-02
134GO:0009750: response to fructose1.13E-02
135GO:0006470: protein dephosphorylation1.19E-02
136GO:0071365: cellular response to auxin stimulus1.25E-02
137GO:0010105: negative regulation of ethylene-activated signaling pathway1.25E-02
138GO:0006887: exocytosis1.26E-02
139GO:0015031: protein transport1.32E-02
140GO:0010229: inflorescence development1.37E-02
141GO:0010102: lateral root morphogenesis1.37E-02
142GO:0009737: response to abscisic acid1.38E-02
143GO:0010143: cutin biosynthetic process1.49E-02
144GO:0002237: response to molecule of bacterial origin1.49E-02
145GO:0042343: indole glucosinolate metabolic process1.61E-02
146GO:0031347: regulation of defense response1.66E-02
147GO:0000165: MAPK cascade1.66E-02
148GO:0010025: wax biosynthetic process1.74E-02
149GO:0000027: ribosomal large subunit assembly1.88E-02
150GO:0080147: root hair cell development1.88E-02
151GO:0015992: proton transport2.15E-02
152GO:0098542: defense response to other organism2.15E-02
153GO:0048278: vesicle docking2.15E-02
154GO:0016998: cell wall macromolecule catabolic process2.15E-02
155GO:0019748: secondary metabolic process2.29E-02
156GO:2000022: regulation of jasmonic acid mediated signaling pathway2.29E-02
157GO:0080167: response to karrikin2.30E-02
158GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway2.40E-02
159GO:0042127: regulation of cell proliferation2.59E-02
160GO:0009306: protein secretion2.59E-02
161GO:0042147: retrograde transport, endosome to Golgi2.74E-02
162GO:0009742: brassinosteroid mediated signaling pathway2.79E-02
163GO:0010051: xylem and phloem pattern formation2.90E-02
164GO:0010182: sugar mediated signaling pathway3.06E-02
165GO:0006662: glycerol ether metabolic process3.06E-02
166GO:0010197: polar nucleus fusion3.06E-02
167GO:0007165: signal transduction3.35E-02
168GO:0006623: protein targeting to vacuole3.39E-02
169GO:0010183: pollen tube guidance3.39E-02
170GO:0016132: brassinosteroid biosynthetic process3.55E-02
171GO:0002229: defense response to oomycetes3.55E-02
172GO:0010193: response to ozone3.55E-02
173GO:0006635: fatty acid beta-oxidation3.55E-02
174GO:0006904: vesicle docking involved in exocytosis4.25E-02
175GO:0009615: response to virus4.62E-02
176GO:0001666: response to hypoxia4.62E-02
177GO:0009607: response to biotic stimulus4.80E-02
178GO:0006906: vesicle fusion4.99E-02
RankGO TermAdjusted P value
1GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity0.00E+00
2GO:0016504: peptidase activator activity0.00E+00
3GO:0047598: 7-dehydrocholesterol reductase activity0.00E+00
4GO:0051997: 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase activity0.00E+00
5GO:0016034: maleylacetoacetate isomerase activity0.00E+00
6GO:0061604: molybdopterin-synthase sulfurtransferase activity0.00E+00
7GO:0050269: coniferyl-aldehyde dehydrogenase activity0.00E+00
8GO:0004164: diphthine synthase activity0.00E+00
9GO:0000224: peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity0.00E+00
10GO:0070577: lysine-acetylated histone binding0.00E+00
11GO:0009918: sterol delta7 reductase activity0.00E+00
12GO:0000247: C-8 sterol isomerase activity0.00E+00
13GO:0047750: cholestenol delta-isomerase activity0.00E+00
14GO:0061605: molybdopterin-synthase adenylyltransferase activity0.00E+00
15GO:0033971: hydroxyisourate hydrolase activity0.00E+00
16GO:0005524: ATP binding2.91E-10
17GO:0016301: kinase activity7.01E-10
18GO:0004674: protein serine/threonine kinase activity2.11E-08
19GO:0004576: oligosaccharyl transferase activity6.54E-07
20GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity1.47E-06
21GO:0004190: aspartic-type endopeptidase activity4.06E-06
22GO:0004714: transmembrane receptor protein tyrosine kinase activity1.18E-05
23GO:0004449: isocitrate dehydrogenase (NAD+) activity4.34E-05
24GO:0005388: calcium-transporting ATPase activity7.84E-05
25GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism7.84E-05
26GO:0004012: phospholipid-translocating ATPase activity2.36E-04
27GO:0004656: procollagen-proline 4-dioxygenase activity2.36E-04
28GO:0008565: protein transporter activity3.22E-04
29GO:0008809: carnitine racemase activity3.52E-04
30GO:1901149: salicylic acid binding3.52E-04
31GO:0015085: calcium ion transmembrane transporter activity3.52E-04
32GO:0004815: aspartate-tRNA ligase activity3.52E-04
33GO:0033925: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity3.52E-04
34GO:0004348: glucosylceramidase activity3.52E-04
35GO:0031957: very long-chain fatty acid-CoA ligase activity3.52E-04
36GO:0004675: transmembrane receptor protein serine/threonine kinase activity3.69E-04
37GO:0004708: MAP kinase kinase activity3.84E-04
38GO:0035242: protein-arginine omega-N asymmetric methyltransferase activity7.67E-04
39GO:0043021: ribonucleoprotein complex binding7.67E-04
40GO:0038199: ethylene receptor activity7.67E-04
41GO:0035241: protein-arginine omega-N monomethyltransferase activity7.67E-04
42GO:0016277: [myelin basic protein]-arginine N-methyltransferase activity7.67E-04
43GO:0004713: protein tyrosine kinase activity7.77E-04
44GO:0001664: G-protein coupled receptor binding1.24E-03
45GO:0008469: histone-arginine N-methyltransferase activity1.24E-03
46GO:0008265: Mo-molybdopterin cofactor sulfurase activity1.24E-03
47GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity1.24E-03
48GO:0004148: dihydrolipoyl dehydrogenase activity1.24E-03
49GO:0031683: G-protein beta/gamma-subunit complex binding1.24E-03
50GO:0005516: calmodulin binding1.41E-03
51GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors1.58E-03
52GO:0004165: dodecenoyl-CoA delta-isomerase activity1.79E-03
53GO:0051740: ethylene binding1.79E-03
54GO:0009678: hydrogen-translocating pyrophosphatase activity1.79E-03
55GO:0004792: thiosulfate sulfurtransferase activity1.79E-03
56GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor1.79E-03
57GO:0031418: L-ascorbic acid binding1.80E-03
58GO:0004672: protein kinase activity2.15E-03
59GO:0033612: receptor serine/threonine kinase binding2.18E-03
60GO:0070628: proteasome binding2.40E-03
61GO:0043495: protein anchor2.40E-03
62GO:0004930: G-protein coupled receptor activity2.40E-03
63GO:0003756: protein disulfide isomerase activity2.82E-03
64GO:0045431: flavonol synthase activity3.07E-03
65GO:0008641: small protein activating enzyme activity3.07E-03
66GO:0005546: phosphatidylinositol-4,5-bisphosphate binding3.07E-03
67GO:0016298: lipase activity3.33E-03
68GO:0030276: clathrin binding3.57E-03
69GO:0004029: aldehyde dehydrogenase (NAD) activity3.79E-03
70GO:0000287: magnesium ion binding3.96E-03
71GO:0046872: metal ion binding3.98E-03
72GO:0102391: decanoate--CoA ligase activity4.57E-03
73GO:0016746: transferase activity, transferring acyl groups5.19E-03
74GO:0004467: long-chain fatty acid-CoA ligase activity5.40E-03
75GO:0008235: metalloexopeptidase activity5.40E-03
76GO:0004427: inorganic diphosphatase activity5.40E-03
77GO:0008121: ubiquinol-cytochrome-c reductase activity5.40E-03
78GO:0003872: 6-phosphofructokinase activity5.40E-03
79GO:0008320: protein transmembrane transporter activity5.40E-03
80GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity5.67E-03
81GO:0052747: sinapyl alcohol dehydrogenase activity6.27E-03
82GO:0004630: phospholipase D activity7.19E-03
83GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity7.19E-03
84GO:0004806: triglyceride lipase activity7.51E-03
85GO:0030247: polysaccharide binding7.51E-03
86GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity9.17E-03
87GO:0004568: chitinase activity1.02E-02
88GO:0005545: 1-phosphatidylinositol binding1.02E-02
89GO:0004673: protein histidine kinase activity1.02E-02
90GO:0004177: aminopeptidase activity1.13E-02
91GO:0008559: xenobiotic-transporting ATPase activity1.13E-02
92GO:0005515: protein binding1.15E-02
93GO:0004712: protein serine/threonine/tyrosine kinase activity1.16E-02
94GO:0045551: cinnamyl-alcohol dehydrogenase activity1.25E-02
95GO:0015095: magnesium ion transmembrane transporter activity1.37E-02
96GO:0000155: phosphorelay sensor kinase activity1.37E-02
97GO:0005262: calcium channel activity1.37E-02
98GO:0005484: SNAP receptor activity1.37E-02
99GO:0008061: chitin binding1.61E-02
100GO:0003712: transcription cofactor activity1.61E-02
101GO:0008168: methyltransferase activity1.67E-02
102GO:0003954: NADH dehydrogenase activity1.88E-02
103GO:0031625: ubiquitin protein ligase binding2.05E-02
104GO:0004707: MAP kinase activity2.15E-02
105GO:0000166: nucleotide binding2.42E-02
106GO:0008810: cellulase activity2.44E-02
107GO:0008514: organic anion transmembrane transporter activity2.59E-02
108GO:0047134: protein-disulfide reductase activity2.74E-02
109GO:0004871: signal transducer activity3.05E-02
110GO:0004791: thioredoxin-disulfide reductase activity3.22E-02
111GO:0004722: protein serine/threonine phosphatase activity3.23E-02
112GO:0004872: receptor activity3.39E-02
113GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor3.90E-02
114GO:0051213: dioxygenase activity4.62E-02
RankGO TermAdjusted P value
1GO:0045252: oxoglutarate dehydrogenase complex0.00E+00
2GO:0005674: transcription factor TFIIF complex0.00E+00
3GO:0005886: plasma membrane1.76E-16
4GO:0016021: integral component of membrane3.02E-08
5GO:0005783: endoplasmic reticulum6.58E-08
6GO:0008250: oligosaccharyltransferase complex1.47E-06
7GO:0005789: endoplasmic reticulum membrane6.67E-05
8GO:0005911: cell-cell junction3.52E-04
9GO:0031234: extrinsic component of cytoplasmic side of plasma membrane3.52E-04
10GO:0005774: vacuolar membrane3.73E-04
11GO:0030665: clathrin-coated vesicle membrane6.66E-04
12GO:0031304: intrinsic component of mitochondrial inner membrane7.67E-04
13GO:0070545: PeBoW complex7.67E-04
14GO:0005901: caveola7.67E-04
15GO:0005788: endoplasmic reticulum lumen9.02E-04
16GO:0005795: Golgi stack1.45E-03
17GO:0005802: trans-Golgi network1.62E-03
18GO:0005794: Golgi apparatus1.75E-03
19GO:0070062: extracellular exosome1.79E-03
20GO:0030660: Golgi-associated vesicle membrane2.40E-03
21GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane2.40E-03
22GO:0005945: 6-phosphofructokinase complex3.07E-03
23GO:0000164: protein phosphatase type 1 complex3.07E-03
24GO:0030904: retromer complex3.79E-03
25GO:0009504: cell plate4.11E-03
26GO:0030687: preribosome, large subunit precursor5.40E-03
27GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane5.40E-03
28GO:0030131: clathrin adaptor complex6.27E-03
29GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane6.27E-03
30GO:0019005: SCF ubiquitin ligase complex8.33E-03
31GO:0005829: cytosol8.98E-03
32GO:0017119: Golgi transport complex1.02E-02
33GO:0005765: lysosomal membrane1.13E-02
34GO:0031902: late endosome membrane1.26E-02
35GO:0005750: mitochondrial respiratory chain complex III1.49E-02
36GO:0030176: integral component of endoplasmic reticulum membrane1.61E-02
37GO:0005887: integral component of plasma membrane1.62E-02
38GO:0005769: early endosome1.74E-02
39GO:0080008: Cul4-RING E3 ubiquitin ligase complex1.97E-02
40GO:0005768: endosome2.04E-02
41GO:0005905: clathrin-coated pit2.15E-02
42GO:0005839: proteasome core complex2.15E-02
43GO:0005834: heterotrimeric G-protein complex2.33E-02
44GO:0030136: clathrin-coated vesicle2.74E-02
45GO:0019898: extrinsic component of membrane3.39E-02
46GO:0009505: plant-type cell wall3.55E-02
47GO:0000145: exocyst3.72E-02
48GO:0032580: Golgi cisterna membrane4.07E-02
49GO:0000932: P-body4.62E-02
50GO:0031225: anchored component of membrane4.62E-02
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Gene type



Gene DE type