Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G07000

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0051553: flavone biosynthetic process0.00E+00
2GO:0032499: detection of peptidoglycan0.00E+00
3GO:0002752: cell surface pattern recognition receptor signaling pathway0.00E+00
4GO:0072660: maintenance of protein location in plasma membrane0.00E+00
5GO:0000169: activation of MAPK activity involved in osmosensory signaling pathway0.00E+00
6GO:0010401: pectic galactan metabolic process0.00E+00
7GO:0042742: defense response to bacterium6.45E-11
8GO:0006468: protein phosphorylation3.70E-09
9GO:0006952: defense response4.82E-08
10GO:0009617: response to bacterium4.17E-07
11GO:0002221: pattern recognition receptor signaling pathway4.15E-06
12GO:0031349: positive regulation of defense response4.15E-06
13GO:0006517: protein deglycosylation1.48E-05
14GO:0015696: ammonium transport3.30E-05
15GO:0080142: regulation of salicylic acid biosynthetic process5.93E-05
16GO:0060548: negative regulation of cell death5.93E-05
17GO:0072488: ammonium transmembrane transport5.93E-05
18GO:0070588: calcium ion transmembrane transport8.03E-05
19GO:0009817: defense response to fungus, incompatible interaction9.65E-05
20GO:0045087: innate immune response1.48E-04
21GO:0031348: negative regulation of defense response1.69E-04
22GO:0046777: protein autophosphorylation2.08E-04
23GO:0070370: cellular heat acclimation2.42E-04
24GO:0006643: membrane lipid metabolic process3.02E-04
25GO:1902065: response to L-glutamate3.02E-04
26GO:0006680: glucosylceramide catabolic process3.02E-04
27GO:0032491: detection of molecule of fungal origin3.02E-04
28GO:0015784: GDP-mannose transport3.02E-04
29GO:0060862: negative regulation of floral organ abscission3.02E-04
30GO:0009968: negative regulation of signal transduction3.02E-04
31GO:0010266: response to vitamin B13.02E-04
32GO:0016337: single organismal cell-cell adhesion3.02E-04
33GO:0006805: xenobiotic metabolic process3.02E-04
34GO:0097502: mannosylation3.02E-04
35GO:0043547: positive regulation of GTPase activity3.02E-04
36GO:0051245: negative regulation of cellular defense response3.02E-04
37GO:0006422: aspartyl-tRNA aminoacylation3.02E-04
38GO:0055081: anion homeostasis3.02E-04
39GO:0080136: priming of cellular response to stress3.02E-04
40GO:0046938: phytochelatin biosynthetic process3.02E-04
41GO:0007166: cell surface receptor signaling pathway3.52E-04
42GO:0006002: fructose 6-phosphate metabolic process3.75E-04
43GO:0010120: camalexin biosynthetic process3.75E-04
44GO:0010193: response to ozone3.93E-04
45GO:0009751: response to salicylic acid4.04E-04
46GO:0030163: protein catabolic process4.66E-04
47GO:0009620: response to fungus5.63E-04
48GO:0043069: negative regulation of programmed cell death6.23E-04
49GO:0051258: protein polymerization6.60E-04
50GO:0010541: acropetal auxin transport6.60E-04
51GO:0008535: respiratory chain complex IV assembly6.60E-04
52GO:0015012: heparan sulfate proteoglycan biosynthetic process6.60E-04
53GO:0015914: phospholipid transport6.60E-04
54GO:2000072: regulation of defense response to fungus, incompatible interaction6.60E-04
55GO:0080185: effector dependent induction by symbiont of host immune response6.60E-04
56GO:0080181: lateral root branching6.60E-04
57GO:0006024: glycosaminoglycan biosynthetic process6.60E-04
58GO:0052541: plant-type cell wall cellulose metabolic process6.60E-04
59GO:0052544: defense response by callose deposition in cell wall7.19E-04
60GO:0009627: systemic acquired resistance7.27E-04
61GO:0015031: protein transport8.76E-04
62GO:0008219: cell death8.83E-04
63GO:0050832: defense response to fungus8.91E-04
64GO:0010200: response to chitin9.46E-04
65GO:0009737: response to abscisic acid1.04E-03
66GO:0034605: cellular response to heat1.04E-03
67GO:1900140: regulation of seedling development1.07E-03
68GO:0072661: protein targeting to plasma membrane1.07E-03
69GO:0015783: GDP-fucose transport1.07E-03
70GO:0048281: inflorescence morphogenesis1.07E-03
71GO:0015695: organic cation transport1.07E-03
72GO:0042344: indole glucosinolate catabolic process1.07E-03
73GO:0009867: jasmonic acid mediated signaling pathway1.18E-03
74GO:0006886: intracellular protein transport1.29E-03
75GO:0015700: arsenite transport1.53E-03
76GO:0071323: cellular response to chitin1.53E-03
77GO:0001676: long-chain fatty acid metabolic process1.53E-03
78GO:0006515: misfolded or incompletely synthesized protein catabolic process1.53E-03
79GO:0000187: activation of MAPK activity1.53E-03
80GO:0048194: Golgi vesicle budding1.53E-03
81GO:0002239: response to oomycetes1.53E-03
82GO:0006612: protein targeting to membrane1.53E-03
83GO:0010148: transpiration1.53E-03
84GO:0006516: glycoprotein catabolic process1.53E-03
85GO:0006470: protein dephosphorylation1.81E-03
86GO:0009636: response to toxic substance1.89E-03
87GO:0010468: regulation of gene expression1.93E-03
88GO:0010188: response to microbial phytotoxin2.06E-03
89GO:0010363: regulation of plant-type hypersensitive response2.06E-03
90GO:0022622: root system development2.06E-03
91GO:0071219: cellular response to molecule of bacterial origin2.06E-03
92GO:2000038: regulation of stomatal complex development2.06E-03
93GO:0010508: positive regulation of autophagy2.06E-03
94GO:0009625: response to insect2.07E-03
95GO:0009306: protein secretion2.25E-03
96GO:0031365: N-terminal protein amino acid modification2.63E-03
97GO:0006665: sphingolipid metabolic process2.63E-03
98GO:0042391: regulation of membrane potential2.64E-03
99GO:0061025: membrane fusion3.05E-03
100GO:0006970: response to osmotic stress3.21E-03
101GO:0009759: indole glucosinolate biosynthetic process3.24E-03
102GO:0010942: positive regulation of cell death3.24E-03
103GO:0006751: glutathione catabolic process3.24E-03
104GO:0060918: auxin transport3.24E-03
105GO:0006623: protein targeting to vacuole3.27E-03
106GO:0010183: pollen tube guidance3.27E-03
107GO:0000302: response to reactive oxygen species3.50E-03
108GO:0006891: intra-Golgi vesicle-mediated transport3.50E-03
109GO:0006694: steroid biosynthetic process3.90E-03
110GO:2000037: regulation of stomatal complex patterning3.90E-03
111GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response3.90E-03
112GO:0000911: cytokinesis by cell plate formation3.90E-03
113GO:0009612: response to mechanical stimulus3.90E-03
114GO:0016192: vesicle-mediated transport4.30E-03
115GO:0010044: response to aluminum ion4.60E-03
116GO:0010161: red light signaling pathway4.60E-03
117GO:0046470: phosphatidylcholine metabolic process4.60E-03
118GO:0043090: amino acid import4.60E-03
119GO:0071446: cellular response to salicylic acid stimulus4.60E-03
120GO:0009414: response to water deprivation5.03E-03
121GO:0006491: N-glycan processing5.35E-03
122GO:0009816: defense response to bacterium, incompatible interaction5.35E-03
123GO:0006102: isocitrate metabolic process5.35E-03
124GO:0009787: regulation of abscisic acid-activated signaling pathway5.35E-03
125GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline5.35E-03
126GO:0030162: regulation of proteolysis5.35E-03
127GO:0006979: response to oxidative stress5.36E-03
128GO:2000031: regulation of salicylic acid mediated signaling pathway6.13E-03
129GO:0009699: phenylpropanoid biosynthetic process6.13E-03
130GO:0006075: (1->3)-beta-D-glucan biosynthetic process6.13E-03
131GO:0006367: transcription initiation from RNA polymerase II promoter6.13E-03
132GO:0046685: response to arsenic-containing substance6.95E-03
133GO:0006499: N-terminal protein myristoylation7.29E-03
134GO:0009407: toxin catabolic process7.29E-03
135GO:0010119: regulation of stomatal movement7.65E-03
136GO:0048268: clathrin coat assembly7.80E-03
137GO:0007165: signal transduction8.02E-03
138GO:0000103: sulfate assimilation8.70E-03
139GO:0007064: mitotic sister chromatid cohesion8.70E-03
140GO:0009409: response to cold9.53E-03
141GO:0030148: sphingolipid biosynthetic process9.63E-03
142GO:0009682: induced systemic resistance9.63E-03
143GO:0006897: endocytosis9.98E-03
144GO:0010105: negative regulation of ethylene-activated signaling pathway1.06E-02
145GO:0006890: retrograde vesicle-mediated transport, Golgi to ER1.06E-02
146GO:0012501: programmed cell death1.06E-02
147GO:0010229: inflorescence development1.16E-02
148GO:0010102: lateral root morphogenesis1.16E-02
149GO:0031347: regulation of defense response1.31E-02
150GO:0010053: root epidermal cell differentiation1.37E-02
151GO:0006486: protein glycosylation1.46E-02
152GO:0010187: negative regulation of seed germination1.59E-02
153GO:0000027: ribosomal large subunit assembly1.59E-02
154GO:0009863: salicylic acid mediated signaling pathway1.59E-02
155GO:0009738: abscisic acid-activated signaling pathway1.63E-02
156GO:0080167: response to karrikin1.72E-02
157GO:0006096: glycolytic process1.73E-02
158GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.79E-02
159GO:0006508: proteolysis1.82E-02
160GO:0048278: vesicle docking1.82E-02
161GO:0009626: plant-type hypersensitive response1.85E-02
162GO:0035556: intracellular signal transduction1.86E-02
163GO:0009814: defense response, incompatible interaction1.95E-02
164GO:2000022: regulation of jasmonic acid mediated signaling pathway1.95E-02
165GO:0010227: floral organ abscission2.07E-02
166GO:0009624: response to nematode2.09E-02
167GO:0042127: regulation of cell proliferation2.20E-02
168GO:0042147: retrograde transport, endosome to Golgi2.33E-02
169GO:0010051: xylem and phloem pattern formation2.46E-02
170GO:0010087: phloem or xylem histogenesis2.46E-02
171GO:0042631: cellular response to water deprivation2.46E-02
172GO:0006662: glycerol ether metabolic process2.59E-02
173GO:0010197: polar nucleus fusion2.59E-02
174GO:0010182: sugar mediated signaling pathway2.59E-02
175GO:0008360: regulation of cell shape2.59E-02
176GO:0009646: response to absence of light2.73E-02
177GO:0009749: response to glucose2.87E-02
178GO:0002229: defense response to oomycetes3.01E-02
179GO:0046686: response to cadmium ion3.47E-02
180GO:0010150: leaf senescence3.61E-02
181GO:0045490: pectin catabolic process3.61E-02
182GO:0006904: vesicle docking involved in exocytosis3.61E-02
183GO:0000910: cytokinesis3.76E-02
184GO:0009615: response to virus3.92E-02
185GO:0009607: response to biotic stimulus4.07E-02
186GO:0006906: vesicle fusion4.24E-02
187GO:0048481: plant ovule development4.73E-02
188GO:0010311: lateral root formation4.90E-02
189GO:0009813: flavonoid biosynthetic process4.90E-02
RankGO TermAdjusted P value
1GO:0005458: GDP-mannose transmembrane transporter activity0.00E+00
2GO:2001080: chitosan binding0.00E+00
3GO:0033759: flavone synthase activity0.00E+00
4GO:0050269: coniferyl-aldehyde dehydrogenase activity0.00E+00
5GO:0052925: dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase activity0.00E+00
6GO:0000224: peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity0.00E+00
7GO:0000033: alpha-1,3-mannosyltransferase activity0.00E+00
8GO:0016301: kinase activity3.45E-14
9GO:0005524: ATP binding1.34E-12
10GO:0004674: protein serine/threonine kinase activity1.15E-07
11GO:0005516: calmodulin binding7.67E-06
12GO:0004714: transmembrane receptor protein tyrosine kinase activity8.02E-06
13GO:0004672: protein kinase activity2.23E-05
14GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity3.30E-05
15GO:0005388: calcium-transporting ATPase activity5.53E-05
16GO:0008519: ammonium transmembrane transporter activity1.36E-04
17GO:0004707: MAP kinase activity1.48E-04
18GO:0004675: transmembrane receptor protein serine/threonine kinase activity2.39E-04
19GO:0003872: 6-phosphofructokinase activity2.42E-04
20GO:0004348: glucosylceramidase activity3.02E-04
21GO:0071992: phytochelatin transmembrane transporter activity3.02E-04
22GO:0052917: dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase activity3.02E-04
23GO:1901149: salicylic acid binding3.02E-04
24GO:0015085: calcium ion transmembrane transporter activity3.02E-04
25GO:0004815: aspartate-tRNA ligase activity3.02E-04
26GO:0046870: cadmium ion binding3.02E-04
27GO:0033925: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity3.02E-04
28GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity3.02E-04
29GO:0004591: oxoglutarate dehydrogenase (succinyl-transferring) activity3.02E-04
30GO:0015446: ATPase-coupled arsenite transmembrane transporter activity3.02E-04
31GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity5.46E-04
32GO:0004713: protein tyrosine kinase activity6.23E-04
33GO:0038199: ethylene receptor activity6.60E-04
34GO:0045140: inositol phosphoceramide synthase activity6.60E-04
35GO:0043531: ADP binding7.19E-04
36GO:0003840: gamma-glutamyltransferase activity1.07E-03
37GO:0036374: glutathione hydrolase activity1.07E-03
38GO:0005457: GDP-fucose transmembrane transporter activity1.07E-03
39GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity1.07E-03
40GO:0004148: dihydrolipoyl dehydrogenase activity1.07E-03
41GO:0004190: aspartic-type endopeptidase activity1.17E-03
42GO:0030552: cAMP binding1.17E-03
43GO:0030553: cGMP binding1.17E-03
44GO:0046872: metal ion binding1.44E-03
45GO:0051740: ethylene binding1.53E-03
46GO:0004449: isocitrate dehydrogenase (NAD+) activity1.53E-03
47GO:0005216: ion channel activity1.58E-03
48GO:0033612: receptor serine/threonine kinase binding1.74E-03
49GO:0043495: protein anchor2.06E-03
50GO:0004930: G-protein coupled receptor activity2.06E-03
51GO:0019199: transmembrane receptor protein kinase activity2.06E-03
52GO:0004040: amidase activity2.63E-03
53GO:0005546: phosphatidylinositol-4,5-bisphosphate binding2.63E-03
54GO:0005249: voltage-gated potassium channel activity2.64E-03
55GO:0030551: cyclic nucleotide binding2.64E-03
56GO:0030276: clathrin binding2.84E-03
57GO:0030976: thiamine pyrophosphate binding3.24E-03
58GO:0004029: aldehyde dehydrogenase (NAD) activity3.24E-03
59GO:0005261: cation channel activity3.90E-03
60GO:0004602: glutathione peroxidase activity3.90E-03
61GO:0004656: procollagen-proline 4-dioxygenase activity3.90E-03
62GO:0102391: decanoate--CoA ligase activity3.90E-03
63GO:0004012: phospholipid-translocating ATPase activity3.90E-03
64GO:0008320: protein transmembrane transporter activity4.60E-03
65GO:0043295: glutathione binding4.60E-03
66GO:0004467: long-chain fatty acid-CoA ligase activity4.60E-03
67GO:0005338: nucleotide-sugar transmembrane transporter activity4.60E-03
68GO:0008235: metalloexopeptidase activity4.60E-03
69GO:0004708: MAP kinase kinase activity5.35E-03
70GO:0030247: polysaccharide binding5.97E-03
71GO:0005515: protein binding6.02E-03
72GO:0004722: protein serine/threonine phosphatase activity6.03E-03
73GO:0003843: 1,3-beta-D-glucan synthase activity6.13E-03
74GO:0004630: phospholipase D activity6.13E-03
75GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity6.13E-03
76GO:0008565: protein transporter activity6.25E-03
77GO:0050897: cobalt ion binding7.65E-03
78GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity7.80E-03
79GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors8.39E-03
80GO:0004673: protein histidine kinase activity8.70E-03
81GO:0005545: 1-phosphatidylinositol binding8.70E-03
82GO:0004712: protein serine/threonine/tyrosine kinase activity9.16E-03
83GO:0004177: aminopeptidase activity9.63E-03
84GO:0008559: xenobiotic-transporting ATPase activity9.63E-03
85GO:0004364: glutathione transferase activity1.04E-02
86GO:0005484: SNAP receptor activity1.08E-02
87GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.16E-02
88GO:0000155: phosphorelay sensor kinase activity1.16E-02
89GO:0008061: chitin binding1.37E-02
90GO:0003712: transcription cofactor activity1.37E-02
91GO:0005509: calcium ion binding1.43E-02
92GO:0031418: L-ascorbic acid binding1.59E-02
93GO:0031625: ubiquitin protein ligase binding1.62E-02
94GO:0035251: UDP-glucosyltransferase activity1.82E-02
95GO:0008810: cellulase activity2.07E-02
96GO:0047134: protein-disulfide reductase activity2.33E-02
97GO:0004791: thioredoxin-disulfide reductase activity2.73E-02
98GO:0004872: receptor activity2.87E-02
99GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor3.31E-02
100GO:0009931: calcium-dependent protein serine/threonine kinase activity4.24E-02
101GO:0004683: calmodulin-dependent protein kinase activity4.40E-02
102GO:0016798: hydrolase activity, acting on glycosyl bonds4.40E-02
103GO:0004806: triglyceride lipase activity4.40E-02
104GO:0004721: phosphoprotein phosphatase activity4.40E-02
105GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity4.73E-02
106GO:0005096: GTPase activator activity4.90E-02
RankGO TermAdjusted P value
1GO:0005674: transcription factor TFIIF complex0.00E+00
2GO:0005886: plasma membrane1.49E-19
3GO:0016021: integral component of membrane3.62E-06
4GO:0005887: integral component of plasma membrane2.99E-05
5GO:0005945: 6-phosphofructokinase complex9.36E-05
6GO:0009504: cell plate3.60E-04
7GO:0030665: clathrin-coated vesicle membrane5.34E-04
8GO:0017119: Golgi transport complex6.23E-04
9GO:0005901: caveola6.60E-04
10GO:0005802: trans-Golgi network9.77E-04
11GO:0046861: glyoxysomal membrane1.07E-03
12GO:0009898: cytoplasmic side of plasma membrane2.06E-03
13GO:0009506: plasmodesma2.43E-03
14GO:0000164: protein phosphatase type 1 complex2.63E-03
15GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane4.60E-03
16GO:0030131: clathrin adaptor complex5.35E-03
17GO:0009514: glyoxysome6.13E-03
18GO:0000148: 1,3-beta-D-glucan synthase complex6.13E-03
19GO:0019005: SCF ubiquitin ligase complex6.61E-03
20GO:0000139: Golgi membrane9.53E-03
21GO:0031902: late endosome membrane9.98E-03
22GO:0005789: endoplasmic reticulum membrane1.20E-02
23GO:0005794: Golgi apparatus1.37E-02
24GO:0005795: Golgi stack1.37E-02
25GO:0005737: cytoplasm1.50E-02
26GO:0005905: clathrin-coated pit1.82E-02
27GO:0030136: clathrin-coated vesicle2.33E-02
28GO:0005773: vacuole2.47E-02
29GO:0019898: extrinsic component of membrane2.87E-02
30GO:0071944: cell periphery3.31E-02
31GO:0032580: Golgi cisterna membrane3.46E-02
32GO:0005768: endosome4.14E-02
33GO:0000151: ubiquitin ligase complex4.73E-02
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Gene type



Gene DE type