co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G05340

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0043620: regulation of DNA-templated transcription in response to stress	0.00E+00
2	GO:0080052: response to histidine	0.00E+00
3	GO:0080053: response to phenylalanine	0.00E+00
4	GO:0006793: phosphorus metabolic process	0.00E+00
5	GO:0051238: sequestering of metal ion	0.00E+00
6	GO:0033542: fatty acid beta-oxidation, unsaturated, even number	0.00E+00
7	GO:0006182: cGMP biosynthetic process	0.00E+00
8	GO:0080169: cellular response to boron-containing substance deprivation	0.00E+00
9	GO:0010055: atrichoblast differentiation	0.00E+00
10	GO:0043201: response to leucine	0.00E+00
11	GO:0009620: response to fungus	7.92E-06
12	GO:0006468: protein phosphorylation	2.05E-04
13	GO:0010421: hydrogen peroxide-mediated programmed cell death	3.22E-04
14	GO:0006562: proline catabolic process	3.22E-04
15	GO:0032491: detection of molecule of fungal origin	3.22E-04
16	GO:0032107: regulation of response to nutrient levels	3.22E-04
17	GO:0051938: L-glutamate import	3.22E-04
18	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	3.22E-04
19	GO:0010726: positive regulation of hydrogen peroxide metabolic process	3.22E-04
20	GO:0009636: response to toxic substance	3.24E-04
21	GO:0009617: response to bacterium	4.54E-04
22	GO:0002240: response to molecule of oomycetes origin	7.02E-04
23	GO:0015865: purine nucleotide transport	7.02E-04
24	GO:0042939: tripeptide transport	7.02E-04
25	GO:0042325: regulation of phosphorylation	7.02E-04
26	GO:0019441: tryptophan catabolic process to kynurenine	7.02E-04
27	GO:0043091: L-arginine import	7.02E-04
28	GO:0051592: response to calcium ion	7.02E-04
29	GO:0080183: response to photooxidative stress	7.02E-04
30	GO:0010133: proline catabolic process to glutamate	7.02E-04
31	GO:0015802: basic amino acid transport	7.02E-04
32	GO:0009805: coumarin biosynthetic process	7.02E-04
33	GO:0009866: induced systemic resistance, ethylene mediated signaling pathway	7.02E-04
34	GO:0009817: defense response to fungus, incompatible interaction	9.92E-04
35	GO:0055114: oxidation-reduction process	1.03E-03
36	GO:0010200: response to chitin	1.12E-03
37	GO:0009407: toxin catabolic process	1.12E-03
38	GO:0006556: S-adenosylmethionine biosynthetic process	1.14E-03
39	GO:0010351: lithium ion transport	1.14E-03
40	GO:0010476: gibberellin mediated signaling pathway	1.14E-03
41	GO:0010325: raffinose family oligosaccharide biosynthetic process	1.14E-03
42	GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway	1.14E-03
43	GO:0006537: glutamate biosynthetic process	1.63E-03
44	GO:0006882: cellular zinc ion homeostasis	1.63E-03
45	GO:0045017: glycerolipid biosynthetic process	1.63E-03
46	GO:0010116: positive regulation of abscisic acid biosynthetic process	1.63E-03
47	GO:0046902: regulation of mitochondrial membrane permeability	1.63E-03
48	GO:0006874: cellular calcium ion homeostasis	1.74E-03
49	GO:0016998: cell wall macromolecule catabolic process	1.91E-03
50	GO:0032259: methylation	1.93E-03
51	GO:0009751: response to salicylic acid	2.03E-03
52	GO:0042938: dipeptide transport	2.19E-03
53	GO:0045227: capsule polysaccharide biosynthetic process	2.19E-03
54	GO:0046345: abscisic acid catabolic process	2.19E-03
55	GO:0009939: positive regulation of gibberellic acid mediated signaling pathway	2.19E-03
56	GO:0006536: glutamate metabolic process	2.19E-03
57	GO:0033358: UDP-L-arabinose biosynthetic process	2.19E-03
58	GO:0006012: galactose metabolic process	2.28E-03
59	GO:0009809: lignin biosynthetic process	2.69E-03
60	GO:0002238: response to molecule of fungal origin	3.46E-03
61	GO:0006014: D-ribose metabolic process	3.46E-03
62	GO:0006561: proline biosynthetic process	3.46E-03
63	GO:0010942: positive regulation of cell death	3.46E-03
64	GO:0015691: cadmium ion transport	3.46E-03
65	GO:0010256: endomembrane system organization	3.46E-03
66	GO:0006555: methionine metabolic process	3.46E-03
67	GO:0006623: protein targeting to vacuole	3.60E-03
68	GO:0045926: negative regulation of growth	4.17E-03
69	GO:0048280: vesicle fusion with Golgi apparatus	4.17E-03
70	GO:0048444: floral organ morphogenesis	4.17E-03
71	GO:0019509: L-methionine salvage from methylthioadenosine	4.17E-03
72	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	4.17E-03
73	GO:0050829: defense response to Gram-negative bacterium	4.92E-03
74	GO:0030026: cellular manganese ion homeostasis	4.92E-03
75	GO:1900057: positive regulation of leaf senescence	4.92E-03
76	GO:0000122: negative regulation of transcription from RNA polymerase II promoter	4.92E-03
77	GO:1902074: response to salt	4.92E-03
78	GO:1900056: negative regulation of leaf senescence	4.92E-03
79	GO:0009615: response to virus	5.57E-03
80	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	5.71E-03
81	GO:0016559: peroxisome fission	5.71E-03
82	GO:0010120: camalexin biosynthetic process	6.55E-03
83	GO:0010204: defense response signaling pathway, resistance gene-independent	6.55E-03
84	GO:0009699: phenylpropanoid biosynthetic process	6.55E-03
85	GO:0009821: alkaloid biosynthetic process	7.42E-03
86	GO:0009056: catabolic process	7.42E-03
87	GO:0007338: single fertilization	7.42E-03
88	GO:0008202: steroid metabolic process	8.34E-03
89	GO:0006896: Golgi to vacuole transport	9.30E-03
90	GO:0055062: phosphate ion homeostasis	9.30E-03
91	GO:0006032: chitin catabolic process	9.30E-03
92	GO:0009688: abscisic acid biosynthetic process	9.30E-03
93	GO:0043069: negative regulation of programmed cell death	9.30E-03
94	GO:0007166: cell surface receptor signaling pathway	1.00E-02
95	GO:0009682: induced systemic resistance	1.03E-02
96	GO:0006631: fatty acid metabolic process	1.10E-02
97	GO:0002213: defense response to insect	1.13E-02
98	GO:0000266: mitochondrial fission	1.13E-02
99	GO:0006790: sulfur compound metabolic process	1.13E-02
100	GO:0006626: protein targeting to mitochondrion	1.24E-02
101	GO:0055046: microgametogenesis	1.24E-02
102	GO:0009718: anthocyanin-containing compound biosynthetic process	1.24E-02
103	GO:0002237: response to molecule of bacterial origin	1.35E-02
104	GO:0010143: cutin biosynthetic process	1.35E-02
105	GO:0006855: drug transmembrane transport	1.39E-02
106	GO:0070588: calcium ion transmembrane transport	1.46E-02
107	GO:0046854: phosphatidylinositol phosphorylation	1.46E-02
108	GO:0009969: xyloglucan biosynthetic process	1.46E-02
109	GO:0009225: nucleotide-sugar metabolic process	1.46E-02
110	GO:0046686: response to cadmium ion	1.50E-02
111	GO:0006812: cation transport	1.50E-02
112	GO:0042538: hyperosmotic salinity response	1.50E-02
113	GO:0010025: wax biosynthetic process	1.58E-02
114	GO:0006970: response to osmotic stress	1.62E-02
115	GO:0030150: protein import into mitochondrial matrix	1.70E-02
116	GO:0005992: trehalose biosynthetic process	1.70E-02
117	GO:0042742: defense response to bacterium	1.94E-02
118	GO:0003333: amino acid transmembrane transport	1.95E-02
119	GO:0006979: response to oxidative stress	1.96E-02
120	GO:0006730: one-carbon metabolic process	2.08E-02
121	GO:0071456: cellular response to hypoxia	2.08E-02
122	GO:0019748: secondary metabolic process	2.08E-02
123	GO:0009693: ethylene biosynthetic process	2.22E-02
124	GO:0010227: floral organ abscission	2.22E-02
125	GO:0009561: megagametogenesis	2.35E-02
126	GO:0042147: retrograde transport, endosome to Golgi	2.49E-02
127	GO:0042391: regulation of membrane potential	2.63E-02
128	GO:0006885: regulation of pH	2.78E-02
129	GO:0048544: recognition of pollen	2.92E-02
130	GO:0006814: sodium ion transport	2.92E-02
131	GO:0042752: regulation of circadian rhythm	2.92E-02
132	GO:0019252: starch biosynthetic process	3.07E-02
133	GO:0009851: auxin biosynthetic process	3.07E-02
134	GO:0002229: defense response to oomycetes	3.23E-02
135	GO:0010193: response to ozone	3.23E-02
136	GO:0006891: intra-Golgi vesicle-mediated transport	3.23E-02
137	GO:0042744: hydrogen peroxide catabolic process	3.27E-02
138	GO:0009630: gravitropism	3.38E-02
139	GO:0016310: phosphorylation	3.52E-02
140	GO:0071281: cellular response to iron ion	3.54E-02
141	GO:0006633: fatty acid biosynthetic process	3.61E-02
142	GO:0010252: auxin homeostasis	3.70E-02
143	GO:0009567: double fertilization forming a zygote and endosperm	3.70E-02
144	GO:0010150: leaf senescence	3.96E-02
145	GO:0051607: defense response to virus	4.03E-02
146	GO:0009816: defense response to bacterium, incompatible interaction	4.36E-02
147	GO:0009607: response to biotic stimulus	4.36E-02
148	GO:0009627: systemic acquired resistance	4.53E-02
149	GO:0006888: ER to Golgi vesicle-mediated transport	4.71E-02
150	GO:0006950: response to stress	4.71E-02
151	GO:0016311: dephosphorylation	4.88E-02
152	GO:0050832: defense response to fungus	4.97E-02

Rank	GO Term	Adjusted P value
1	GO:0016312: inositol bisphosphate phosphatase activity	0.00E+00
2	GO:0051670: inulinase activity	0.00E+00
3	GO:0016301: kinase activity	5.00E-06
4	GO:0004674: protein serine/threonine kinase activity	8.97E-05
5	GO:0005524: ATP binding	9.18E-05
6	GO:0005496: steroid binding	1.04E-04
7	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	1.48E-04
8	GO:0102391: decanoate--CoA ligase activity	2.05E-04
9	GO:0003978: UDP-glucose 4-epimerase activity	2.05E-04
10	GO:0004364: glutathione transferase activity	2.50E-04
11	GO:0004467: long-chain fatty acid-CoA ligase activity	2.67E-04
12	GO:0051669: fructan beta-fructosidase activity	3.22E-04
13	GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity	3.22E-04
14	GO:0004657: proline dehydrogenase activity	3.22E-04
15	GO:0031957: very long-chain fatty acid-CoA ligase activity	3.22E-04
16	GO:0031219: levanase activity	3.22E-04
17	GO:0031127: alpha-(1,2)-fucosyltransferase activity	3.22E-04
18	GO:0009055: electron carrier activity	5.83E-04
19	GO:0008171: O-methyltransferase activity	6.82E-04
20	GO:0032934: sterol binding	7.02E-04
21	GO:0050736: O-malonyltransferase activity	7.02E-04
22	GO:0004061: arylformamidase activity	7.02E-04
23	GO:0042937: tripeptide transporter activity	7.02E-04
24	GO:0004566: beta-glucuronidase activity	7.02E-04
25	GO:0010331: gibberellin binding	7.02E-04
26	GO:0010297: heteropolysaccharide binding	7.02E-04
27	GO:0042409: caffeoyl-CoA O-methyltransferase activity	1.14E-03
28	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	1.14E-03
29	GO:0004383: guanylate cyclase activity	1.14E-03
30	GO:0016805: dipeptidase activity	1.14E-03
31	GO:0004478: methionine adenosyltransferase activity	1.14E-03
32	GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity	1.14E-03
33	GO:0030145: manganese ion binding	1.19E-03
34	GO:0015181: arginine transmembrane transporter activity	1.63E-03
35	GO:0004351: glutamate decarboxylase activity	1.63E-03
36	GO:0015189: L-lysine transmembrane transporter activity	1.63E-03
37	GO:0005313: L-glutamate transmembrane transporter activity	2.19E-03
38	GO:0004031: aldehyde oxidase activity	2.19E-03
39	GO:0050302: indole-3-acetaldehyde oxidase activity	2.19E-03
40	GO:0010279: indole-3-acetic acid amido synthetase activity	2.19E-03
41	GO:0009916: alternative oxidase activity	2.19E-03
42	GO:0015368: calcium:cation antiporter activity	2.19E-03
43	GO:0050373: UDP-arabinose 4-epimerase activity	2.19E-03
44	GO:0042936: dipeptide transporter activity	2.19E-03
45	GO:0015369: calcium:proton antiporter activity	2.19E-03
46	GO:0004040: amidase activity	2.80E-03
47	GO:0005471: ATP:ADP antiporter activity	2.80E-03
48	GO:0010294: abscisic acid glucosyltransferase activity	2.80E-03
49	GO:0047714: galactolipase activity	3.46E-03
50	GO:0050660: flavin adenine dinucleotide binding	4.15E-03
51	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	4.17E-03
52	GO:0004747: ribokinase activity	4.17E-03
53	GO:0004144: diacylglycerol O-acyltransferase activity	4.17E-03
54	GO:0004656: procollagen-proline 4-dioxygenase activity	4.17E-03
55	GO:0051920: peroxiredoxin activity	4.17E-03
56	GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity	4.92E-03
57	GO:0008235: metalloexopeptidase activity	4.92E-03
58	GO:0052747: sinapyl alcohol dehydrogenase activity	5.71E-03
59	GO:0008865: fructokinase activity	5.71E-03
60	GO:0015491: cation:cation antiporter activity	5.71E-03
61	GO:0004714: transmembrane receptor protein tyrosine kinase activity	5.71E-03
62	GO:0016209: antioxidant activity	5.71E-03
63	GO:0008970: phosphatidylcholine 1-acylhydrolase activity	6.55E-03
64	GO:0008142: oxysterol binding	6.55E-03
65	GO:0071949: FAD binding	7.42E-03
66	GO:0008417: fucosyltransferase activity	7.42E-03
67	GO:0015238: drug transmembrane transporter activity	7.64E-03
68	GO:0015174: basic amino acid transmembrane transporter activity	8.34E-03
69	GO:0016844: strictosidine synthase activity	8.34E-03
70	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	9.22E-03
71	GO:0004568: chitinase activity	9.30E-03
72	GO:0004177: aminopeptidase activity	1.03E-02
73	GO:0008559: xenobiotic-transporting ATPase activity	1.03E-02
74	GO:0045551: cinnamyl-alcohol dehydrogenase activity	1.13E-02
75	GO:0005516: calmodulin binding	1.16E-02
76	GO:0015266: protein channel activity	1.24E-02
77	GO:0004022: alcohol dehydrogenase (NAD) activity	1.24E-02
78	GO:0019888: protein phosphatase regulator activity	1.24E-02
79	GO:0005388: calcium-transporting ATPase activity	1.24E-02
80	GO:0051537: 2 iron, 2 sulfur cluster binding	1.29E-02
81	GO:0008168: methyltransferase activity	1.41E-02
82	GO:0005217: intracellular ligand-gated ion channel activity	1.46E-02
83	GO:0004970: ionotropic glutamate receptor activity	1.46E-02
84	GO:0030552: cAMP binding	1.46E-02
85	GO:0030553: cGMP binding	1.46E-02
86	GO:0004601: peroxidase activity	1.48E-02
87	GO:0020037: heme binding	1.54E-02
88	GO:0001046: core promoter sequence-specific DNA binding	1.70E-02
89	GO:0031418: L-ascorbic acid binding	1.70E-02
90	GO:0005216: ion channel activity	1.83E-02
91	GO:0045735: nutrient reservoir activity	1.91E-02
92	GO:0080043: quercetin 3-O-glucosyltransferase activity	2.10E-02
93	GO:0080044: quercetin 7-O-glucosyltransferase activity	2.10E-02
94	GO:0052689: carboxylic ester hydrolase activity	2.20E-02
95	GO:0015035: protein disulfide oxidoreductase activity	2.37E-02
96	GO:0005451: monovalent cation:proton antiporter activity	2.63E-02
97	GO:0005249: voltage-gated potassium channel activity	2.63E-02
98	GO:0030551: cyclic nucleotide binding	2.63E-02
99	GO:0046872: metal ion binding	2.68E-02
100	GO:0015299: solute:proton antiporter activity	2.92E-02
101	GO:0010181: FMN binding	2.92E-02
102	GO:0019901: protein kinase binding	3.07E-02
103	GO:0004872: receptor activity	3.07E-02
104	GO:0015385: sodium:proton antiporter activity	3.54E-02
105	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	3.70E-02
106	GO:0015297: antiporter activity	3.78E-02
107	GO:0051213: dioxygenase activity	4.19E-02
108	GO:0008194: UDP-glycosyltransferase activity	4.43E-02
109	GO:0004806: triglyceride lipase activity	4.71E-02
110	GO:0030247: polysaccharide binding	4.71E-02
111	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	4.88E-02

Rank	GO Term	Adjusted P value
1	GO:0016021: integral component of membrane	8.72E-08
2	GO:0005886: plasma membrane	1.55E-06
3	GO:0005770: late endosome	3.36E-04
4	GO:0000325: plant-type vacuole	1.19E-03
5	GO:0030140: trans-Golgi network transport vesicle	3.46E-03
6	GO:0005794: Golgi apparatus	4.53E-03
7	GO:0032580: Golgi cisterna membrane	4.67E-03
8	GO:0005783: endoplasmic reticulum	5.18E-03
9	GO:0031305: integral component of mitochondrial inner membrane	5.71E-03
10	GO:0012507: ER to Golgi transport vesicle membrane	5.71E-03
11	GO:0005765: lysosomal membrane	1.03E-02
12	GO:0031902: late endosome membrane	1.10E-02
13	GO:0070469: respiratory chain	1.83E-02
14	GO:0005741: mitochondrial outer membrane	1.95E-02
15	GO:0005744: mitochondrial inner membrane presequence translocase complex	2.35E-02
16	GO:0005773: vacuole	3.05E-02
17	GO:0071944: cell periphery	3.54E-02
18	GO:0043231: intracellular membrane-bounded organelle	3.56E-02
19	GO:0005778: peroxisomal membrane	3.86E-02
20	GO:0009705: plant-type vacuole membrane	3.96E-02